Protein–RNA interactions for Protein: P43005

SLC1A1, Excitatory amino acid transporter 3, humanhuman

Predictions only

Length 524 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC1A1P43005 ARID3C-201ENST00000378909 1411 ntAPPRIS P1 TSL 2 BASIC19.43■□□□□ 0.7
SLC1A1P43005 PMAIP1-202ENST00000316660 1948 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
SLC1A1P43005 ISY1-201ENST00000273541 1704 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
SLC1A1P43005 MSI2-203ENST00000416426 1714 ntTSL 2 BASIC19.43■□□□□ 0.7
SLC1A1P43005 TDRKH-207ENST00000458431 2768 ntAPPRIS P2 TSL 1 (best) BASIC19.43■□□□□ 0.7
SLC1A1P43005 CDK5R1-201ENST00000313401 4325 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
SLC1A1P43005 PRSS3-201ENST00000342836 1144 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
SLC1A1P43005 MTHFD1L-201ENST00000367307 1049 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
SLC1A1P43005 AL360181.5-201ENST00000368554 1044 ntAPPRIS P1 TSL 2 BASIC19.43■□□□□ 0.7
SLC1A1P43005 ZCCHC24-201ENST00000372333 906 ntTSL 2 BASIC19.43■□□□□ 0.7
SLC1A1P43005 AC098590.1-201ENST00000468126 897 ntBASIC19.43■□□□□ 0.7
SLC1A1P43005 AC117500.4-201ENST00000542797 617 ntTSL 3 BASIC19.43■□□□□ 0.7
SLC1A1P43005 CBLN3-202ENST00000555436 718 ntTSL 3 BASIC19.43■□□□□ 0.7
SLC1A1P43005 CYGB-204ENST00000589342 815 ntTSL 3 BASIC19.43■□□□□ 0.7
SLC1A1P43005 GRAMD4P8-201ENST00000605465 1115 ntBASIC19.43■□□□□ 0.7
SLC1A1P43005 AC113410.3-201ENST00000623366 203 ntBASIC19.43■□□□□ 0.7
SLC1A1P43005 SNN-201ENST00000329565 3312 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
SLC1A1P43005 CIZ1-226ENST00000629610 2855 ntAPPRIS ALT2 TSL 2 BASIC19.43■□□□□ 0.7
SLC1A1P43005 C19orf57-208ENST00000591586 1559 ntAPPRIS ALT2 TSL 5 BASIC19.43■□□□□ 0.7
SLC1A1P43005 RPS6KA1-204ENST00000374168 3186 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
SLC1A1P43005 AATK-203ENST00000417379 5081 ntAPPRIS ALT2 TSL 1 (best) BASIC19.43■□□□□ 0.7
SLC1A1P43005 FGFR3-205ENST00000440486 4287 ntAPPRIS P3 TSL 5 BASIC19.43■□□□□ 0.7
SLC1A1P43005 PPFIA1-202ENST00000389547 4133 ntAPPRIS ALT1 TSL 1 (best) BASIC19.43■□□□□ 0.7
SLC1A1P43005 RGS20-203ENST00000344277 1667 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
SLC1A1P43005 FPGS-201ENST00000373225 2278 ntTSL 2 BASIC19.42■□□□□ 0.7
SLC1A1P43005 FDXR-203ENST00000420580 1705 ntTSL 2 BASIC19.42■□□□□ 0.7
SLC1A1P43005 TRABD-201ENST00000303434 2329 ntAPPRIS P3 TSL 1 (best) BASIC19.42■□□□□ 0.7
SLC1A1P43005 GGT3P-201ENST00000412448 2340 ntTSL 2 BASIC19.42■□□□□ 0.7
SLC1A1P43005 ACAP3-202ENST00000354700 3896 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
SLC1A1P43005 C12orf42-205ENST00000548048 1532 ntAPPRIS ALT2 TSL 5 BASIC19.42■□□□□ 0.7
SLC1A1P43005 SLC25A43-201ENST00000217909 2783 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
SLC1A1P43005 C6orf132-202ENST00000356542 894 ntAPPRIS ALT2 TSL 2 BASIC19.42■□□□□ 0.7
SLC1A1P43005 AC073343.2-203ENST00000366167 564 ntTSL 4 BASIC19.42■□□□□ 0.7
SLC1A1P43005 GPR35-203ENST00000407714 1258 ntAPPRIS P3 TSL 1 (best) BASIC19.42■□□□□ 0.7
SLC1A1P43005 CT47A1-201ENST00000433030 1288 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
SLC1A1P43005 ELP6-205ENST00000439305 880 ntTSL 2 BASIC19.42■□□□□ 0.7
SLC1A1P43005 AL049637.2-201ENST00000641778 930 ntBASIC19.42■□□□□ 0.7
SLC1A1P43005 TM2D2-201ENST00000397070 1631 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
SLC1A1P43005 TRPV4-208ENST00000544971 2295 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
SLC1A1P43005 DDRGK1-201ENST00000354488 1306 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
SLC1A1P43005 OARD1-202ENST00000424266 1337 ntAPPRIS P1 TSL 2 BASIC19.42■□□□□ 0.7
SLC1A1P43005 RNF170-205ENST00000526349 1338 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
SLC1A1P43005 ARL5A-201ENST00000295087 5326 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
SLC1A1P43005 AL133373.2-201ENST00000623187 2828 ntBASIC19.42■□□□□ 0.7
SLC1A1P43005 DHRS4-201ENST00000313250 1443 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
SLC1A1P43005 PRSS23-201ENST00000280258 4015 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
SLC1A1P43005 CLIP2-201ENST00000223398 5563 ntAPPRIS P1 TSL 5 BASIC19.41■□□□□ 0.7
SLC1A1P43005 AC068880.1-201ENST00000507289 2297 ntBASIC19.41■□□□□ 0.7
SLC1A1P43005 GABBR1-204ENST00000377016 4299 ntTSL 5 BASIC19.41■□□□□ 0.7
SLC1A1P43005 NADK-201ENST00000341426 3235 ntAPPRIS P3 TSL 2 BASIC19.41■□□□□ 0.7
SLC1A1P43005 FAM131A-202ENST00000340957 2421 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
SLC1A1P43005 SCYL1-202ENST00000279270 1659 ntTSL 5 BASIC19.41■□□□□ 0.7
SLC1A1P43005 UBB-203ENST00000395839 1012 ntAPPRIS P1 TSL 2 BASIC19.41■□□□□ 0.7
SLC1A1P43005 AL049780.2-201ENST00000556236 367 ntTSL 3 BASIC19.41■□□□□ 0.7
SLC1A1P43005 AP005263.1-201ENST00000579126 914 ntTSL 2 BASIC19.41■□□□□ 0.7
SLC1A1P43005 AC008649.1-201ENST00000589557 516 ntTSL 2 BASIC19.41■□□□□ 0.7
SLC1A1P43005 REXO1L10P-201ENST00000615707 1290 ntBASIC19.41■□□□□ 0.7
SLC1A1P43005 REXO1L12P-201ENST00000622156 912 ntBASIC19.41■□□□□ 0.7
SLC1A1P43005 DECR2-212ENST00000627716 352 ntTSL 2 BASIC19.41■□□□□ 0.7
SLC1A1P43005 USP32-201ENST00000300896 5171 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
SLC1A1P43005 AP001476.1-201ENST00000451618 2198 ntTSL 2 BASIC19.41■□□□□ 0.7
SLC1A1P43005 CD276-201ENST00000318424 2738 ntTSL 5 BASIC19.41■□□□□ 0.7
SLC1A1P43005 ZNF846-205ENST00000588267 1943 ntTSL 2 BASIC19.41■□□□□ 0.7
SLC1A1P43005 SIM2-201ENST00000290399 4442 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
SLC1A1P43005 MCUR1-201ENST00000379170 5471 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
SLC1A1P43005 ESPNP-201ENST00000270691 2015 ntBASIC19.41■□□□□ 0.7
SLC1A1P43005 ATP5L-201ENST00000300688 1577 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
SLC1A1P43005 DENND2A-201ENST00000275884 3735 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
SLC1A1P43005 CD40-201ENST00000372276 1623 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
SLC1A1P43005 CYP2D7-201ENST00000358097 1655 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
SLC1A1P43005 BMS1P4-202ENST00000584747 1716 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
SLC1A1P43005 GSDMD-201ENST00000262580 1762 ntAPPRIS P2 TSL 1 (best) BASIC19.4■□□□□ 0.7
SLC1A1P43005 EFR3A-201ENST00000254624 5438 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
SLC1A1P43005 EDC3-214ENST00000568176 1825 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
SLC1A1P43005 ARID1A-201ENST00000324856 8577 ntAPPRIS P3 TSL 1 (best) BASIC19.4■□□□□ 0.7
SLC1A1P43005 FBXO44-201ENST00000251546 1896 ntTSL 2 BASIC19.4■□□□□ 0.7
SLC1A1P43005 POR-209ENST00000439269 1858 ntTSL 2 BASIC19.4■□□□□ 0.7
SLC1A1P43005 FLYWCH1P1-201ENST00000460917 1874 ntBASIC19.4■□□□□ 0.7
SLC1A1P43005 GATB-213ENST00000515812 1893 ntTSL 5 BASIC19.4■□□□□ 0.7
SLC1A1P43005 HCG11-201ENST00000411553 5696 ntBASIC19.4■□□□□ 0.7
SLC1A1P43005 LIME1-201ENST00000309546 1178 ntAPPRIS P3 TSL 1 (best) BASIC19.4■□□□□ 0.7
SLC1A1P43005 FAM26F-202ENST00000368605 1117 ntAPPRIS P1 TSL 5 BASIC19.4■□□□□ 0.7
SLC1A1P43005 POMC-202ENST00000380794 1295 ntAPPRIS P1 TSL 2 BASIC19.4■□□□□ 0.7
SLC1A1P43005 AL355355.2-201ENST00000442321 338 ntBASIC19.4■□□□□ 0.7
SLC1A1P43005 AL158047.1-201ENST00000445918 881 ntBASIC19.4■□□□□ 0.7
SLC1A1P43005 DBNL-214ENST00000456905 1241 ntTSL 2 BASIC19.4■□□□□ 0.7
SLC1A1P43005 GLYCTK-205ENST00000473032 935 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
SLC1A1P43005 FDX2-206ENST00000492239 773 ntTSL 2 BASIC19.4■□□□□ 0.7
SLC1A1P43005 SIVA1-207ENST00000556195 674 ntTSL 3 BASIC19.4■□□□□ 0.7
SLC1A1P43005 LINC02167-201ENST00000562769 594 ntTSL 3 BASIC19.4■□□□□ 0.7
SLC1A1P43005 TGIF1-222ENST00000577543 729 ntTSL 3 BASIC19.4■□□□□ 0.7
SLC1A1P43005 MIR3180-5-201ENST00000583743 153 ntBASIC19.4■□□□□ 0.7
SLC1A1P43005 FIBIN-201ENST00000318627 1938 ntAPPRIS P1 BASIC19.4■□□□□ 0.7
SLC1A1P43005 AC027097.1-202ENST00000592201 1954 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
SLC1A1P43005 CD151-213ENST00000528011 1369 ntAPPRIS ALT1 TSL 5 BASIC19.4■□□□□ 0.7
SLC1A1P43005 KRT8P50-201ENST00000562022 1438 ntBASIC19.4■□□□□ 0.7
SLC1A1P43005 CENPA-202ENST00000335756 1452 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
SLC1A1P43005 GSEC-201ENST00000626810 2289 ntTSL 2 BASIC19.4■□□□□ 0.7
SLC1A1P43005 PRDM12-201ENST00000253008 2476 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
SLC1A1P43005 RPL32-202ENST00000396953 1734 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.7
Retrieved 100 of 98,524 protein–RNA pairs in 43.6 ms