Protein–RNA interactions for Protein: P41002

CCNF, Cyclin-F, humanhuman

Predictions only

Length 786 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCNFP41002 DKK3-203ENST00000525493 1326 ntTSL 2 BASIC18.68■□□□□ 0.58
CCNFP41002 FMN2-201ENST00000319653 6434 ntAPPRIS P1 TSL 5 BASIC18.68■□□□□ 0.58
CCNFP41002 WDTC1-201ENST00000319394 4819 ntAPPRIS ALT1 TSL 1 (best) BASIC18.68■□□□□ 0.58
CCNFP41002 APH1A-202ENST00000360244 2353 ntAPPRIS ALT1 TSL 1 (best) BASIC18.68■□□□□ 0.58
CCNFP41002 PIP4K2C-202ENST00000422156 1558 ntTSL 2 BASIC18.68■□□□□ 0.58
CCNFP41002 ERICH1-201ENST00000262109 1813 ntAPPRIS P2 TSL 1 (best) BASIC18.67■□□□□ 0.58
CCNFP41002 FRS3-201ENST00000259748 2094 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
CCNFP41002 FARP2-202ENST00000373287 2580 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
CCNFP41002 PSTK-201ENST00000368887 1705 ntAPPRIS P2 TSL 1 (best) BASIC18.67■□□□□ 0.58
CCNFP41002 PRSS3-201ENST00000342836 1144 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
CCNFP41002 AC116562.2-201ENST00000507042 360 ntBASIC18.67■□□□□ 0.58
CCNFP41002 ADGRD1-AS1-202ENST00000542980 1277 ntTSL 4 BASIC18.67■□□□□ 0.58
CCNFP41002 AC087498.1-201ENST00000572493 945 ntAPPRIS P1 BASIC18.67■□□□□ 0.58
CCNFP41002 UBALD1-209ENST00000591897 1275 ntTSL 2 BASIC18.67■□□□□ 0.58
CCNFP41002 KANK3-205ENST00000610351 1191 ntTSL 5 BASIC18.67■□□□□ 0.58
CCNFP41002 AC026471.5-201ENST00000615068 467 ntBASIC18.67■□□□□ 0.58
CCNFP41002 AC011298.2-201ENST00000617989 482 ntBASIC18.67■□□□□ 0.58
CCNFP41002 DECR2-212ENST00000627716 352 ntTSL 2 BASIC18.67■□□□□ 0.58
CCNFP41002 AC097662.2-201ENST00000641359 267 ntAPPRIS P1 BASIC18.67■□□□□ 0.58
CCNFP41002 TJP3-205ENST00000587686 2946 ntAPPRIS ALT2 TSL 1 (best) BASIC18.67■□□□□ 0.58
CCNFP41002 SAAL1-201ENST00000300013 1518 ntAPPRIS ALT1 TSL 2 BASIC18.67■□□□□ 0.58
CCNFP41002 AC063977.6-201ENST00000600074 1763 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
CCNFP41002 HSD11B1L-221ENST00000583928 1319 ntTSL 5 BASIC18.67■□□□□ 0.58
CCNFP41002 MFSD10-205ENST00000507555 1573 ntTSL 5 BASIC18.67■□□□□ 0.58
CCNFP41002 SLC12A4-201ENST00000316341 4765 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
CCNFP41002 TRIM74-201ENST00000285805 1350 ntAPPRIS P2 TSL 1 (best) BASIC18.67■□□□□ 0.58
CCNFP41002 PRSS50-202ENST00000315170 1372 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
CCNFP41002 TRIM73-201ENST00000323819 1358 ntAPPRIS P2 TSL 1 (best) BASIC18.67■□□□□ 0.58
CCNFP41002 AC020763.4-201ENST00000623414 4170 ntBASIC18.67■□□□□ 0.58
CCNFP41002 TMEM234-203ENST00000373593 1411 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
CCNFP41002 PTGER3-209ENST00000460330 1447 ntAPPRIS ALT2 TSL 1 (best) BASIC18.66■□□□□ 0.58
CCNFP41002 MSI2-203ENST00000416426 1714 ntTSL 2 BASIC18.66■□□□□ 0.58
CCNFP41002 BMS1P4-202ENST00000584747 1716 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
CCNFP41002 ESPNP-201ENST00000270691 2015 ntBASIC18.66■□□□□ 0.58
CCNFP41002 RAB4B-EGLN2-201ENST00000594136 2554 ntAPPRIS P1 TSL 2 BASIC18.66■□□□□ 0.58
CCNFP41002 SEPT2-245ENST00000616972 3446 ntTSL 2 BASIC18.66■□□□□ 0.58
CCNFP41002 SLC44A3-201ENST00000271227 2388 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
CCNFP41002 IMMP2L-201ENST00000331762 1205 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
CCNFP41002 RAP1B-203ENST00000378985 1017 ntTSL 2 BASIC18.66■□□□□ 0.58
CCNFP41002 CALML5-201ENST00000380332 859 ntAPPRIS P1 BASIC18.66■□□□□ 0.58
CCNFP41002 HOXA9-202ENST00000396345 797 ntTSL 2 BASIC18.66■□□□□ 0.58
CCNFP41002 AL390728.5-201ENST00000428687 706 ntTSL 3 BASIC18.66■□□□□ 0.58
CCNFP41002 B3GAT3P1-201ENST00000471720 806 ntBASIC18.66■□□□□ 0.58
CCNFP41002 DHDH-203ENST00000522614 776 ntTSL 5 BASIC18.66■□□□□ 0.58
CCNFP41002 RAP1B-221ENST00000540209 1264 ntTSL 2 BASIC18.66■□□□□ 0.58
CCNFP41002 AC117500.4-201ENST00000542797 617 ntTSL 3 BASIC18.66■□□□□ 0.58
CCNFP41002 TNFRSF12A-206ENST00000575124 1133 ntTSL 2 BASIC18.66■□□□□ 0.58
CCNFP41002 AC122129.2-201ENST00000583598 466 ntTSL 5 BASIC18.66■□□□□ 0.58
CCNFP41002 AC130371.2-201ENST00000619443 611 ntBASIC18.66■□□□□ 0.58
CCNFP41002 T-201ENST00000296946 2436 ntAPPRIS P1 TSL 5 BASIC18.66■□□□□ 0.58
CCNFP41002 APOA5-201ENST00000227665 1897 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
CCNFP41002 AC135776.1-201ENST00000319817 2481 ntBASIC18.66■□□□□ 0.58
CCNFP41002 MICU3-201ENST00000318063 3992 ntAPPRIS P2 TSL 1 (best) BASIC18.66■□□□□ 0.58
CCNFP41002 RBP4-202ENST00000371467 1314 ntAPPRIS P1 TSL 5 BASIC18.66■□□□□ 0.58
CCNFP41002 PHF1-201ENST00000374512 2224 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
CCNFP41002 GPC2-201ENST00000292377 2532 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
CCNFP41002 KMT2E-207ENST00000476671 2523 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
CCNFP41002 AUTS2-201ENST00000342771 6173 ntAPPRIS P3 TSL 1 (best) BASIC18.66■□□□□ 0.58
CCNFP41002 ACTR3B-203ENST00000397282 1692 ntTSL 2 BASIC18.66■□□□□ 0.58
CCNFP41002 TRIM50-201ENST00000333149 2047 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
CCNFP41002 PRSS23-209ENST00000533902 2043 ntTSL 4 BASIC18.66■□□□□ 0.58
CCNFP41002 KRT8P45-201ENST00000414328 1447 ntBASIC18.66■□□□□ 0.58
CCNFP41002 COQ9-210ENST00000567072 1482 ntTSL 3 BASIC18.65■□□□□ 0.58
CCNFP41002 AC007192.1-201ENST00000593731 5142 ntAPPRIS P1 TSL 2 BASIC18.65■□□□□ 0.58
CCNFP41002 PHB2-203ENST00000535923 1515 ntAPPRIS P2 TSL 5 BASIC18.65■□□□□ 0.58
CCNFP41002 UBQLN4-201ENST00000368309 3576 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
CCNFP41002 POC1B-GALNT4-201ENST00000547474 2207 ntTSL 2 BASIC18.65■□□□□ 0.58
CCNFP41002 IL17C-201ENST00000244241 1044 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
CCNFP41002 ACVR1C-203ENST00000348328 1270 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
CCNFP41002 HLA-DRB1-201ENST00000360004 1229 ntAPPRIS P1 BASIC18.65■□□□□ 0.58
CCNFP41002 DUSP23-203ENST00000368109 729 ntAPPRIS P1 TSL 2 BASIC18.65■□□□□ 0.58
CCNFP41002 RXFP4-201ENST00000368318 1240 ntAPPRIS P1 BASIC18.65■□□□□ 0.58
CCNFP41002 AC091390.4-202ENST00000476426 537 ntBASIC18.65■□□□□ 0.58
CCNFP41002 AP005263.1-201ENST00000579126 914 ntTSL 2 BASIC18.65■□□□□ 0.58
CCNFP41002 DGCR10-201ENST00000609839 495 ntBASIC18.65■□□□□ 0.58
CCNFP41002 MST1R-214ENST00000613534 2025 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
CCNFP41002 OGFOD3-202ENST00000329197 1652 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
CCNFP41002 ADK-202ENST00000372734 2083 ntAPPRIS ALT1 TSL 1 (best) BASIC18.65■□□□□ 0.58
CCNFP41002 KRT17P2-201ENST00000300992 1314 ntBASIC18.65■□□□□ 0.58
CCNFP41002 BOD1L2-201ENST00000585477 3239 ntAPPRIS P1 BASIC18.65■□□□□ 0.58
CCNFP41002 ZNF865-201ENST00000568956 4005 ntAPPRIS P1 TSL 2 BASIC18.65■□□□□ 0.58
CCNFP41002 BAG5-201ENST00000299204 4848 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
CCNFP41002 GPR75-201ENST00000394705 2115 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
CCNFP41002 RELL2-201ENST00000297164 2520 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
CCNFP41002 CADPS2-208ENST00000615869 6066 ntAPPRIS ALT1 TSL 5 BASIC18.65■□□□□ 0.58
CCNFP41002 FDXR-202ENST00000413947 1809 ntTSL 2 BASIC18.65■□□□□ 0.58
CCNFP41002 TMEM132A-201ENST00000005286 3480 ntAPPRIS P3 TSL 5 BASIC18.65■□□□□ 0.58
CCNFP41002 PRKCB-202ENST00000321728 2689 ntAPPRIS ALT1 TSL 1 (best) BASIC18.65■□□□□ 0.58
CCNFP41002 WBP2-219ENST00000626827 1867 ntTSL 5 BASIC18.65■□□□□ 0.58
CCNFP41002 TMEM25-203ENST00000354284 1456 ntTSL 2 BASIC18.65■□□□□ 0.58
CCNFP41002 IL17RC-206ENST00000416074 2342 ntAPPRIS ALT2 TSL 1 (best) BASIC18.65■□□□□ 0.58
CCNFP41002 B3GALNT1-202ENST00000392779 3221 ntAPPRIS P1 TSL 2 BASIC18.64■□□□□ 0.58
CCNFP41002 ZNF200-202ENST00000396870 2373 ntAPPRIS ALT2 TSL 1 (best) BASIC18.64■□□□□ 0.58
CCNFP41002 PXK-206ENST00000463280 2825 ntTSL 2 BASIC18.64■□□□□ 0.58
CCNFP41002 GSDMD-206ENST00000526406 2496 ntAPPRIS P2 TSL 2 BASIC18.64■□□□□ 0.58
CCNFP41002 PIP5K1C-205ENST00000589578 2933 ntAPPRIS ALT2 TSL 1 (best) BASIC18.64■□□□□ 0.58
CCNFP41002 MAEA-201ENST00000264750 2058 ntTSL 2 BASIC18.64■□□□□ 0.57
CCNFP41002 ZNF655-202ENST00000320583 1601 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
CCNFP41002 KCNIP4-206ENST00000447367 1641 ntTSL 5 BASIC18.64■□□□□ 0.57
CCNFP41002 GNE-201ENST00000377902 2565 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
Retrieved 100 of 98,524 protein–RNA pairs in 45.6 ms