Protein–RNA interactions for Protein: P39905

GDNF, Glial cell line-derived neurotrophic factor, humanhuman

Predictions only

Length 211 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GDNFP39905 BCAR1-201ENST00000162330 3221 ntAPPRIS P3 TSL 1 (best) BASIC16.16■□□□□ 0.18
GDNFP39905 KSR1-201ENST00000268763 2806 ntAPPRIS ALT2 TSL 5 BASIC16.16■□□□□ 0.18
GDNFP39905 AC012317.2-201ENST00000623305 2251 ntBASIC16.16■□□□□ 0.18
GDNFP39905 PDE2A-226ENST00000544570 3119 ntTSL 5 BASIC16.16■□□□□ 0.18
GDNFP39905 FAM135A-209ENST00000505769 4806 ntTSL 5 BASIC16.16■□□□□ 0.18
GDNFP39905 CDK10-202ENST00000353379 1798 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
GDNFP39905 CPEB3-203ENST00000614585 5789 ntAPPRIS P3 TSL 5 BASIC16.15■□□□□ 0.18
GDNFP39905 FERMT2-204ENST00000399304 2082 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
GDNFP39905 SNAI3-AS1-205ENST00000568633 2096 ntBASIC16.15■□□□□ 0.18
GDNFP39905 PARD3-201ENST00000340077 3518 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
GDNFP39905 ASB13-201ENST00000357700 2699 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
GDNFP39905 AC133785.1-201ENST00000429282 2824 ntTSL 2 BASIC16.15■□□□□ 0.18
GDNFP39905 INPP5A-203ENST00000368594 2967 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
GDNFP39905 HOXD11-201ENST00000249504 1533 ntAPPRIS P1 TSL 3 BASIC16.15■□□□□ 0.18
GDNFP39905 SLC22A18-202ENST00000347936 1542 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
GDNFP39905 DPYSL4-202ENST00000368627 1545 ntTSL 5 BASIC16.15■□□□□ 0.18
GDNFP39905 AL390860.1-201ENST00000449298 1541 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
GDNFP39905 GOLGA7-204ENST00000520817 1984 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
GDNFP39905 CTSB-232ENST00000534510 1989 ntAPPRIS P1 TSL 5 BASIC16.15■□□□□ 0.18
GDNFP39905 USP18-201ENST00000215794 2129 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
GDNFP39905 KANSL2-212ENST00000550347 2714 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
GDNFP39905 ELF3-201ENST00000359651 4994 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
GDNFP39905 APOA5-201ENST00000227665 1897 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
GDNFP39905 ICA1-201ENST00000265577 2309 ntAPPRIS ALT1 TSL 5 BASIC16.15■□□□□ 0.18
GDNFP39905 AC135776.1-201ENST00000319817 2481 ntBASIC16.15■□□□□ 0.18
GDNFP39905 C10orf91-201ENST00000321248 1257 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
GDNFP39905 PRR23B-201ENST00000329447 1896 ntAPPRIS P1 BASIC16.15■□□□□ 0.18
GDNFP39905 ANXA2-201ENST00000332680 1444 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
GDNFP39905 MCHR1-202ENST00000381433 1219 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
GDNFP39905 WWOX-202ENST00000402655 1594 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
GDNFP39905 MAGI2-AS3-202ENST00000422093 762 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
GDNFP39905 POM121L13P-201ENST00000422362 380 ntBASIC16.15■□□□□ 0.18
GDNFP39905 HRAT92-201ENST00000452622 3506 ntTSL 2 BASIC16.15■□□□□ 0.18
GDNFP39905 SOD2-206ENST00000452684 2045 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
GDNFP39905 AC226101.2-201ENST00000458252 747 ntTSL 2 BASIC16.15■□□□□ 0.18
GDNFP39905 TMEM9-209ENST00000485839 938 ntAPPRIS P3 TSL 2 BASIC16.15■□□□□ 0.18
GDNFP39905 ETV7-205ENST00000538992 1434 ntTSL 2 BASIC16.15■□□□□ 0.18
GDNFP39905 AC127496.6-201ENST00000576215 338 ntTSL 3 BASIC16.15■□□□□ 0.18
GDNFP39905 ASPSCR1-211ENST00000581647 720 ntTSL 2 BASIC16.15■□□□□ 0.18
GDNFP39905 FBXL12-205ENST00000586651 1736 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
GDNFP39905 DEDD2-205ENST00000596251 1183 ntAPPRIS P3 TSL 1 (best) BASIC16.15■□□□□ 0.18
GDNFP39905 NCBP2-AS2-201ENST00000602845 918 ntAPPRIS P1 BASIC16.15■□□□□ 0.18
GDNFP39905 ADGRG2-202ENST00000354791 4494 ntTSL 5 BASIC16.15■□□□□ 0.18
GDNFP39905 NINL-201ENST00000278886 4969 ntAPPRIS P3 TSL 1 (best) BASIC16.15■□□□□ 0.18
GDNFP39905 SYTL1-201ENST00000318074 1900 ntTSL 2 BASIC16.15■□□□□ 0.18
GDNFP39905 ALAS2-203ENST00000396198 1936 ntTSL 5 BASIC16.15■□□□□ 0.18
GDNFP39905 AC063977.6-201ENST00000600074 1763 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
GDNFP39905 HTATSF1-204ENST00000535601 3019 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
GDNFP39905 ILKAP-201ENST00000254654 1490 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
GDNFP39905 NAT6-204ENST00000443094 1464 ntAPPRIS ALT2 TSL 1 (best) BASIC16.15■□□□□ 0.18
GDNFP39905 LBX1-AS1-201ENST00000430651 2553 ntTSL 2 BASIC16.15■□□□□ 0.18
GDNFP39905 ABCB9-207ENST00000442833 2587 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
GDNFP39905 CLIC6-201ENST00000349499 3806 ntAPPRIS P3 TSL 1 (best) BASIC16.15■□□□□ 0.18
GDNFP39905 SIN3A-203ENST00000394949 4930 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
GDNFP39905 RGS14-201ENST00000408923 2415 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
GDNFP39905 SCARB2-223ENST00000640640 4608 ntTSL 5 BASIC16.15■□□□□ 0.18
GDNFP39905 MAP3K6-202ENST00000374040 4309 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
GDNFP39905 GPS1-201ENST00000306823 1842 ntAPPRIS P3 TSL 1 (best) BASIC16.15■□□□□ 0.18
GDNFP39905 TCF3-204ENST00000453954 3585 ntTSL 5 BASIC16.15■□□□□ 0.18
GDNFP39905 SPATC1L-201ENST00000291672 2303 ntAPPRIS P1 TSL 2 BASIC16.14■□□□□ 0.18
GDNFP39905 WNT5B-202ENST00000397196 2303 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.18
GDNFP39905 CDC25A-201ENST00000302506 3783 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.18
GDNFP39905 MAP3K6-201ENST00000357582 4136 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
GDNFP39905 RAB43-201ENST00000315150 4467 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
GDNFP39905 CADM3-201ENST00000368124 2546 ntAPPRIS P3 TSL 1 (best) BASIC16.14■□□□□ 0.17
GDNFP39905 MYZAP-201ENST00000267853 2361 ntAPPRIS P3 TSL 1 (best) BASIC16.14■□□□□ 0.17
GDNFP39905 STX5-202ENST00000377897 1785 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
GDNFP39905 CEP78-204ENST00000415759 2623 ntAPPRIS ALT2 TSL 5 BASIC16.14■□□□□ 0.17
GDNFP39905 PTPMT1-202ENST00000326674 768 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
GDNFP39905 CD99-203ENST00000381184 918 ntAPPRIS ALT2 TSL 5 BASIC16.14■□□□□ 0.17
GDNFP39905 EP300-AS1-201ENST00000420537 457 ntTSL 3 BASIC16.14■□□□□ 0.17
GDNFP39905 SLC25A6P5-201ENST00000435663 894 ntBASIC16.14■□□□□ 0.17
GDNFP39905 AC026366.1-201ENST00000488803 879 ntBASIC16.14■□□□□ 0.17
GDNFP39905 LEF1-AS1-203ENST00000507799 459 ntTSL 3 BASIC16.14■□□□□ 0.17
GDNFP39905 SPI1-204ENST00000533968 1290 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
GDNFP39905 AC073912.1-201ENST00000546264 587 ntTSL 3 BASIC16.14■□□□□ 0.17
GDNFP39905 AC068987.1-201ENST00000562996 427 ntTSL 3 BASIC16.14■□□□□ 0.17
GDNFP39905 MAZ-215ENST00000569978 567 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
GDNFP39905 CIRBP-213ENST00000587323 1092 ntTSL 5 BASIC16.14■□□□□ 0.17
GDNFP39905 AL121906.2-201ENST00000621597 723 ntBASIC16.14■□□□□ 0.17
GDNFP39905 FRMD4A-203ENST00000357447 6821 ntAPPRIS P2 TSL 1 (best) BASIC16.14■□□□□ 0.17
GDNFP39905 DMKN-207ENST00000419602 1496 ntAPPRIS ALT2 TSL 1 (best) BASIC16.14■□□□□ 0.17
GDNFP39905 ERICH1-201ENST00000262109 1813 ntAPPRIS P2 TSL 1 (best) BASIC16.14■□□□□ 0.17
GDNFP39905 GAL3ST4-201ENST00000360039 2537 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
GDNFP39905 EMILIN3-201ENST00000332312 3796 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
GDNFP39905 FUCA1-201ENST00000374479 2047 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
GDNFP39905 LRRC29-209ENST00000629962 1303 ntAPPRIS P1 TSL 5 BASIC16.14■□□□□ 0.17
GDNFP39905 AL138752.2-201ENST00000540557 2591 ntAPPRIS P1 TSL 5 BASIC16.14■□□□□ 0.17
GDNFP39905 TUBA8-201ENST00000316027 1518 ntTSL 2 BASIC16.14■□□□□ 0.17
GDNFP39905 C1orf159-204ENST00000379339 2429 ntAPPRIS ALT2 TSL 2 BASIC16.14■□□□□ 0.17
GDNFP39905 DCP1B-201ENST00000280665 2086 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
GDNFP39905 NOMO1-208ENST00000620755 3921 ntAPPRIS ALT2 TSL 1 (best) BASIC16.13■□□□□ 0.17
GDNFP39905 WHAMMP3-203ENST00000621139 4494 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
GDNFP39905 NARFL-201ENST00000251588 2112 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
GDNFP39905 AC005906.2-207ENST00000639005 1580 ntTSL 5 BASIC16.13■□□□□ 0.17
GDNFP39905 SCARF1-205ENST00000571272 2871 ntAPPRIS ALT2 TSL 1 (best) BASIC16.13■□□□□ 0.17
GDNFP39905 ZBTB45-202ENST00000594051 2541 ntAPPRIS P1 TSL 2 BASIC16.13■□□□□ 0.17
GDNFP39905 BPIFB4-201ENST00000375483 2159 ntAPPRIS P1 TSL 5 BASIC16.13■□□□□ 0.17
GDNFP39905 GNE-204ENST00000539208 2190 ntTSL 2 BASIC16.13■□□□□ 0.17
GDNFP39905 PLCH2-203ENST00000378486 4837 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Retrieved 100 of 98,524 protein–RNA pairs in 37 ms