Protein–RNA interactions for Protein: P28566

HTR1E, 5-hydroxytryptamine receptor 1E, humanhuman

Predictions only

Length 365 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HTR1EP28566 TRA2A-211ENST00000538367 2142 ntAPPRIS ALT2 TSL 2 BASIC17.78■□□□□ 0.44
HTR1EP28566 CDX1-202ENST00000616154 1343 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
HTR1EP28566 ARSA-201ENST00000216124 2050 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
HTR1EP28566 ADK-202ENST00000372734 2083 ntAPPRIS ALT1 TSL 1 (best) BASIC17.78■□□□□ 0.44
HTR1EP28566 FARP2-202ENST00000373287 2580 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
HTR1EP28566 MYC-207ENST00000621592 2366 ntAPPRIS ALT1 TSL 1 (best) BASIC17.78■□□□□ 0.44
HTR1EP28566 TREX2-204ENST00000370212 861 ntTSL 5 BASIC17.78■□□□□ 0.44
HTR1EP28566 TREX2-205ENST00000370231 1255 ntAPPRIS P1 TSL 5 BASIC17.78■□□□□ 0.44
HTR1EP28566 IGHV3-73-201ENST00000390636 437 ntAPPRIS P1 BASIC17.78■□□□□ 0.44
HTR1EP28566 TREX2-207ENST00000393862 907 ntAPPRIS P1 TSL 2 BASIC17.78■□□□□ 0.44
HTR1EP28566 CTNNBIP1-204ENST00000400904 1206 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
HTR1EP28566 TSPY23P-201ENST00000440136 739 ntBASIC17.78■□□□□ 0.44
HTR1EP28566 ATP6V0C-203ENST00000565223 668 ntTSL 3 BASIC17.78■□□□□ 0.44
HTR1EP28566 ATP6V0C-204ENST00000568562 477 ntTSL 3 BASIC17.78■□□□□ 0.44
HTR1EP28566 TFEB-206ENST00000403298 2162 ntAPPRIS P1 TSL 5 BASIC17.78■□□□□ 0.44
HTR1EP28566 PTN-201ENST00000348225 1614 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
HTR1EP28566 CLDN5-202ENST00000406028 2548 ntTSL 2 BASIC17.78■□□□□ 0.44
HTR1EP28566 RASSF1-201ENST00000327761 1757 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
HTR1EP28566 TMEM235-203ENST00000550981 1786 ntTSL 2 BASIC17.78■□□□□ 0.44
HTR1EP28566 KCNC2-203ENST00000393288 2485 ntAPPRIS ALT2 TSL 1 (best) BASIC17.78■□□□□ 0.44
HTR1EP28566 B4GALT2-202ENST00000356836 2629 ntAPPRIS P1 TSL 2 BASIC17.78■□□□□ 0.44
HTR1EP28566 ZNF500-202ENST00000545009 2440 ntTSL 2 BASIC17.78■□□□□ 0.44
HTR1EP28566 STIM2-212ENST00000639640 2241 ntAPPRIS P3 TSL 1 (best) BASIC17.78■□□□□ 0.44
HTR1EP28566 OSM-201ENST00000215781 1854 ntAPPRIS P3 TSL 1 (best) BASIC17.78■□□□□ 0.44
HTR1EP28566 HPS3-202ENST00000460120 2745 ntTSL 2 BASIC17.78■□□□□ 0.44
HTR1EP28566 APH1A-202ENST00000360244 2353 ntAPPRIS ALT1 TSL 1 (best) BASIC17.77■□□□□ 0.44
HTR1EP28566 ZHX3-212ENST00000558993 1528 ntTSL 5 BASIC17.77■□□□□ 0.44
HTR1EP28566 RHOU-201ENST00000366691 4372 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
HTR1EP28566 TIMP4-201ENST00000287814 1650 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
HTR1EP28566 KLF13-201ENST00000307145 6825 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
HTR1EP28566 RREB1-203ENST00000379933 5826 ntTSL 1 (best) BASIC17.77■□□□□ 0.44
HTR1EP28566 TMEM214-201ENST00000238788 2990 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
HTR1EP28566 HMBS-214ENST00000542729 1469 ntTSL 2 BASIC17.77■□□□□ 0.44
HTR1EP28566 ABHD14B-202ENST00000361143 1636 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
HTR1EP28566 HHATL-201ENST00000310417 1750 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
HTR1EP28566 CDK10-202ENST00000353379 1798 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
HTR1EP28566 CLDND2-201ENST00000291715 974 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
HTR1EP28566 FKBP2-202ENST00000394540 1002 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
HTR1EP28566 AL162231.1-203ENST00000416454 465 ntAPPRIS ALT2 TSL 2 BASIC17.77■□□□□ 0.44
HTR1EP28566 HAGLROS-201ENST00000426615 1121 ntTSL 2 BASIC17.77■□□□□ 0.44
HTR1EP28566 AC068831.2-201ENST00000448987 367 ntTSL 2 BASIC17.77■□□□□ 0.44
HTR1EP28566 KRT16P5-201ENST00000455284 522 ntBASIC17.77■□□□□ 0.44
HTR1EP28566 LINC00894-209ENST00000458274 547 ntTSL 2 BASIC17.77■□□□□ 0.44
HTR1EP28566 CENPS-CORT-202ENST00000465026 494 ntTSL 3 BASIC17.77■□□□□ 0.44
HTR1EP28566 CENPS-CORT-203ENST00000470413 626 ntTSL 2 BASIC17.77■□□□□ 0.44
HTR1EP28566 RNF146-204ENST00000476956 884 ntTSL 2 BASIC17.77■□□□□ 0.44
HTR1EP28566 SLC39A11-207ENST00000579732 1004 ntTSL 2 BASIC17.77■□□□□ 0.44
HTR1EP28566 AC020911.2-202ENST00000588945 593 ntTSL 3 BASIC17.77■□□□□ 0.44
HTR1EP28566 AC018445.1-201ENST00000621571 568 ntTSL 4 BASIC17.77■□□□□ 0.44
HTR1EP28566 NTAN1-211ENST00000622833 1049 ntTSL 2 BASIC17.77■□□□□ 0.44
HTR1EP28566 NTAN1-212ENST00000624579 1115 ntTSL 2 BASIC17.77■□□□□ 0.44
HTR1EP28566 HAUS4-204ENST00000490506 1447 ntTSL 1 (best) BASIC17.77■□□□□ 0.44
HTR1EP28566 DUS1L-202ENST00000354321 2151 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.43
HTR1EP28566 PANX1-201ENST00000227638 2769 ntAPPRIS P2 TSL 1 (best) BASIC17.77■□□□□ 0.43
HTR1EP28566 SLC35F3-201ENST00000366617 2762 ntAPPRIS ALT1 TSL 1 (best) BASIC17.77■□□□□ 0.43
HTR1EP28566 DPYSL4-202ENST00000368627 1545 ntTSL 5 BASIC17.77■□□□□ 0.43
HTR1EP28566 RANBP10-201ENST00000317506 5341 ntAPPRIS P2 TSL 1 (best) BASIC17.77■□□□□ 0.43
HTR1EP28566 RANBP10-209ENST00000630626 5305 ntAPPRIS ALT2 TSL 5 BASIC17.77■□□□□ 0.43
HTR1EP28566 ALDOC-201ENST00000226253 1982 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.43
HTR1EP28566 ZNF454-202ENST00000519564 2142 ntAPPRIS P1 TSL 2 BASIC17.77■□□□□ 0.43
HTR1EP28566 PRKCB-202ENST00000321728 2689 ntAPPRIS ALT1 TSL 1 (best) BASIC17.76■□□□□ 0.43
HTR1EP28566 RRP7BP-201ENST00000357802 2375 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
HTR1EP28566 SPAG16-209ENST00000447990 1330 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
HTR1EP28566 C19orf84-202ENST00000574814 1318 ntAPPRIS P2 TSL 1 (best) BASIC17.76■□□□□ 0.43
HTR1EP28566 TRAF4-201ENST00000262395 2923 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
HTR1EP28566 IL17RC-206ENST00000416074 2342 ntAPPRIS ALT2 TSL 1 (best) BASIC17.76■□□□□ 0.43
HTR1EP28566 MPV17L2-204ENST00000599612 1408 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
HTR1EP28566 VMO1-201ENST00000328739 766 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
HTR1EP28566 UBE2C-204ENST00000356455 850 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
HTR1EP28566 AC005521.1-201ENST00000393351 872 ntBASIC17.76■□□□□ 0.43
HTR1EP28566 ARF3-208ENST00000541959 807 ntAPPRIS P1 TSL 5 BASIC17.76■□□□□ 0.43
HTR1EP28566 ANAPC11-207ENST00000572639 578 ntAPPRIS P1 TSL 3 BASIC17.76■□□□□ 0.43
HTR1EP28566 P4HB-223ENST00000576390 439 ntTSL 4 BASIC17.76■□□□□ 0.43
HTR1EP28566 SMAGP-206ENST00000604188 433 ntTSL 3 BASIC17.76■□□□□ 0.43
HTR1EP28566 ANKRD54-211ENST00000609454 825 ntTSL 3 BASIC17.76■□□□□ 0.43
HTR1EP28566 AL121829.2-201ENST00000620908 328 ntBASIC17.76■□□□□ 0.43
HTR1EP28566 KMT2E-207ENST00000476671 2523 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
HTR1EP28566 TXNRD3-202ENST00000523403 2351 ntAPPRIS ALT2 TSL 2 BASIC17.76■□□□□ 0.43
HTR1EP28566 OLFM2-203ENST00000590841 1665 ntTSL 2 BASIC17.76■□□□□ 0.43
HTR1EP28566 GTF2IP4-202ENST00000544802 3609 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
HTR1EP28566 ACAA1-201ENST00000301810 1540 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
HTR1EP28566 HCK-202ENST00000375852 2082 ntAPPRIS ALT2 TSL 1 (best) BASIC17.76■□□□□ 0.43
HTR1EP28566 THOC6-209ENST00000575576 1360 ntTSL 5 BASIC17.76■□□□□ 0.43
HTR1EP28566 TLK2-203ENST00000346027 3449 ntAPPRIS P3 TSL 1 (best) BASIC17.76■□□□□ 0.43
HTR1EP28566 PCBP4-210ENST00000471622 1784 ntTSL 5 BASIC17.76■□□□□ 0.43
HTR1EP28566 CCT7-215ENST00000539919 2031 ntTSL 2 BASIC17.76■□□□□ 0.43
HTR1EP28566 RNFT2-204ENST00000407967 2415 ntTSL 5 BASIC17.76■□□□□ 0.43
HTR1EP28566 DISP3-202ENST00000304391 1495 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
HTR1EP28566 SLC44A3-201ENST00000271227 2388 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
HTR1EP28566 GLYCTK-202ENST00000436784 1982 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
HTR1EP28566 NOL3-204ENST00000564053 1592 ntAPPRIS ALT2 TSL 2 BASIC17.75■□□□□ 0.43
HTR1EP28566 AC142086.1-202ENST00000398669 1839 ntTSL 2 BASIC17.75■□□□□ 0.43
HTR1EP28566 GIPR-202ENST00000304207 1432 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
HTR1EP28566 TRMT6-201ENST00000203001 2327 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
HTR1EP28566 ATP6V0B-213ENST00000532642 1685 ntTSL 2 BASIC17.75■□□□□ 0.43
HTR1EP28566 TNFAIP1-202ENST00000544907 1656 ntTSL 2 BASIC17.75■□□□□ 0.43
HTR1EP28566 FAM131A-202ENST00000340957 2421 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
HTR1EP28566 PRSS35-201ENST00000369700 2440 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
HTR1EP28566 AP001059.1-201ENST00000442785 523 ntTSL 3 BASIC17.75■□□□□ 0.43
HTR1EP28566 MIR1302-2HG-202ENST00000473358 712 ntTSL 5 BASIC17.75■□□□□ 0.43
Retrieved 100 of 98,524 protein–RNA pairs in 26.8 ms