Protein–RNA interactions for Protein: P24385

CCND1, G1/S-specific cyclin-D1, humanhuman

Predictions only

Length 295 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCND1P24385 TXNRD3-203ENST00000524230 2950 ntAPPRIS ALT2 TSL 1 (best) BASIC18.67■□□□□ 0.58
CCND1P24385 TEFM-205ENST00000581216 1891 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
CCND1P24385 MLLT1-201ENST00000252674 4507 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
CCND1P24385 ISYNA1-206ENST00000578963 1691 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
CCND1P24385 AL139384.1-201ENST00000612143 3047 ntBASIC18.67■□□□□ 0.58
CCND1P24385 MTMR14-203ENST00000353332 2368 ntAPPRIS ALT2 TSL 1 (best) BASIC18.67■□□□□ 0.58
CCND1P24385 NAT6-204ENST00000443094 1464 ntAPPRIS ALT2 TSL 1 (best) BASIC18.67■□□□□ 0.58
CCND1P24385 HRAT92-201ENST00000452622 3506 ntTSL 2 BASIC18.67■□□□□ 0.58
CCND1P24385 TUBA4A-201ENST00000248437 2162 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
CCND1P24385 TJP3-201ENST00000539908 2897 ntAPPRIS ALT2 TSL 2 BASIC18.67■□□□□ 0.58
CCND1P24385 CTAG2-201ENST00000247306 993 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
CCND1P24385 HP1BP3-202ENST00000375000 928 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
CCND1P24385 SEC61A2-206ENST00000379051 707 ntTSL 3 BASIC18.67■□□□□ 0.58
CCND1P24385 TSPAN4-209ENST00000409543 1031 ntAPPRIS P1 TSL 5 BASIC18.67■□□□□ 0.58
CCND1P24385 BABAM1-202ENST00000447614 930 ntAPPRIS ALT2 TSL 5 BASIC18.67■□□□□ 0.58
CCND1P24385 CERNA3-201ENST00000521403 557 ntTSL 3 BASIC18.67■□□□□ 0.58
CCND1P24385 AC090877.2-202ENST00000560363 574 ntTSL 2 BASIC18.67■□□□□ 0.58
CCND1P24385 MRPL4-204ENST00000588502 827 ntTSL 2 BASIC18.67■□□□□ 0.58
CCND1P24385 AL158152.2-201ENST00000602703 235 ntTSL 3 BASIC18.67■□□□□ 0.58
CCND1P24385 INPP4A-205ENST00000409851 3365 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
CCND1P24385 GCOM1-201ENST00000380568 1516 ntAPPRIS ALT2 TSL 2 BASIC18.67■□□□□ 0.58
CCND1P24385 AP5S1-202ENST00000379567 1791 ntAPPRIS P1 TSL 2 BASIC18.67■□□□□ 0.58
CCND1P24385 ZNF843-203ENST00000618063 1765 ntAPPRIS P2 TSL 1 (best) BASIC18.67■□□□□ 0.58
CCND1P24385 PDE3B-201ENST00000282096 6076 ntAPPRIS P2 TSL 1 (best) BASIC18.67■□□□□ 0.58
CCND1P24385 NFKBIZ-201ENST00000326151 2058 ntTSL 2 BASIC18.67■□□□□ 0.58
CCND1P24385 CFAP77-203ENST00000393216 1638 ntAPPRIS ALT2 TSL 1 (best) BASIC18.67■□□□□ 0.58
CCND1P24385 SAMD11-216ENST00000620200 1874 ntTSL 5 BASIC18.67■□□□□ 0.58
CCND1P24385 IFFO1-201ENST00000336604 2686 ntAPPRIS P3 TSL 1 (best) BASIC18.67■□□□□ 0.58
CCND1P24385 CDK11A-203ENST00000357760 2446 ntAPPRIS ALT1 TSL 1 (best) BASIC18.66■□□□□ 0.58
CCND1P24385 CDK11A-204ENST00000358779 2419 ntAPPRIS ALT1 TSL 1 (best) BASIC18.66■□□□□ 0.58
CCND1P24385 CDK11A-206ENST00000378638 2429 ntTSL 5 BASIC18.66■□□□□ 0.58
CCND1P24385 CDK11A-208ENST00000404249 2449 ntAPPRIS P4 TSL 1 (best) BASIC18.66■□□□□ 0.58
CCND1P24385 ZNF280D-205ENST00000559000 4726 ntAPPRIS ALT2 TSL 2 BASIC18.66■□□□□ 0.58
CCND1P24385 SLC9A6-208ENST00000636206 4711 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
CCND1P24385 NBL1-210ENST00000615215 2160 ntAPPRIS ALT2 TSL 1 (best) BASIC18.66■□□□□ 0.58
CCND1P24385 SLC22A1-202ENST00000366963 1948 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
CCND1P24385 C6orf89-203ENST00000373685 1400 ntAPPRIS ALT2 TSL 5 BASIC18.66■□□□□ 0.58
CCND1P24385 MYBL2-202ENST00000396863 2704 ntTSL 2 BASIC18.66■□□□□ 0.58
CCND1P24385 KMT2E-207ENST00000476671 2523 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
CCND1P24385 NAPA-210ENST00000595227 1460 ntTSL 3 BASIC18.66■□□□□ 0.58
CCND1P24385 KLHL22-201ENST00000328879 2616 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
CCND1P24385 CEP78-204ENST00000415759 2623 ntAPPRIS ALT2 TSL 5 BASIC18.66■□□□□ 0.58
CCND1P24385 NDUFB10-201ENST00000268668 705 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
CCND1P24385 PRCC-201ENST00000271526 2105 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
CCND1P24385 PTPRCAP-201ENST00000326294 1292 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
CCND1P24385 C16orf90-202ENST00000437192 907 ntAPPRIS P1 TSL 5 BASIC18.66■□□□□ 0.58
CCND1P24385 AL158047.1-201ENST00000445918 881 ntBASIC18.66■□□□□ 0.58
CCND1P24385 ABCC5-211ENST00000446941 883 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
CCND1P24385 AL590666.2-201ENST00000448869 758 ntTSL 2 BASIC18.66■□□□□ 0.58
CCND1P24385 CDH18-AS1-201ENST00000513573 424 ntTSL 2 BASIC18.66■□□□□ 0.58
CCND1P24385 AC019257.1-201ENST00000517676 557 ntTSL 5 BASIC18.66■□□□□ 0.58
CCND1P24385 TPGS2-221ENST00000614939 1268 ntTSL 4 BASIC18.66■□□□□ 0.58
CCND1P24385 RGS14-201ENST00000408923 2415 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
CCND1P24385 SNAP91-201ENST00000195649 4434 ntAPPRIS ALT2 TSL 5 BASIC18.66■□□□□ 0.58
CCND1P24385 SNAP91-204ENST00000369694 4449 ntAPPRIS P2 TSL 5 BASIC18.66■□□□□ 0.58
CCND1P24385 MEPCE-201ENST00000310512 3030 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
CCND1P24385 PSTPIP1-203ENST00000558012 1896 ntAPPRIS P2 TSL 1 (best) BASIC18.66■□□□□ 0.58
CCND1P24385 HGFAC-201ENST00000382774 2159 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
CCND1P24385 ATOH1-201ENST00000306011 2212 ntAPPRIS P1 BASIC18.66■□□□□ 0.58
CCND1P24385 SYTL1-208ENST00000543823 2229 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
CCND1P24385 VBP1-201ENST00000286428 1686 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
CCND1P24385 DLK1-202ENST00000341267 4722 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
CCND1P24385 AP001273.2-201ENST00000638767 2993 ntAPPRIS P1 TSL 5 BASIC18.66■□□□□ 0.58
CCND1P24385 RPS6KB2-201ENST00000312629 1733 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
CCND1P24385 ENTPD6-209ENST00000433259 2654 ntTSL 5 BASIC18.66■□□□□ 0.58
CCND1P24385 SAMD11-215ENST00000618779 2368 ntAPPRIS ALT2 TSL 5 BASIC18.66■□□□□ 0.58
CCND1P24385 SPART-209ENST00000494062 3018 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
CCND1P24385 ZBP1-202ENST00000395822 2073 ntTSL 2 BASIC18.65■□□□□ 0.58
CCND1P24385 TRIM9-201ENST00000298355 5284 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
CCND1P24385 AC126763.1-201ENST00000552015 2118 ntBASIC18.65■□□□□ 0.58
CCND1P24385 ILKAP-201ENST00000254654 1490 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
CCND1P24385 CACNA1B-205ENST00000371363 9758 ntAPPRIS ALT2 TSL 5 BASIC18.65■□□□□ 0.58
CCND1P24385 MRM3-201ENST00000304478 1809 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
CCND1P24385 AC073592.3-201ENST00000625118 1834 ntBASIC18.65■□□□□ 0.58
CCND1P24385 STX6-201ENST00000258301 4851 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
CCND1P24385 UBE2E1-201ENST00000306627 1511 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
CCND1P24385 MLST8-232ENST00000569417 1870 ntAPPRIS P3 TSL 1 (best) BASIC18.65■□□□□ 0.58
CCND1P24385 NOMO2-202ENST00000381474 3911 ntAPPRIS ALT2 TSL 5 BASIC18.65■□□□□ 0.58
CCND1P24385 C2orf81-201ENST00000290390 2227 ntAPPRIS P5 TSL 5 BASIC18.65■□□□□ 0.58
CCND1P24385 PTGDR-201ENST00000306051 2942 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
CCND1P24385 SCUBE2-202ENST00000450649 2912 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
CCND1P24385 SLC35B2-205ENST00000538577 1909 ntTSL 2 BASIC18.65■□□□□ 0.58
CCND1P24385 TMEM183A-201ENST00000367242 3019 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
CCND1P24385 ALDOC-201ENST00000226253 1982 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
CCND1P24385 ETV4-204ENST00000545089 1628 ntTSL 2 BASIC18.65■□□□□ 0.58
CCND1P24385 CPAMD8-203ENST00000443236 5992 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
CCND1P24385 PRDX1-201ENST00000262746 1234 ntAPPRIS P1 TSL 5 BASIC18.65■□□□□ 0.58
CCND1P24385 BSX-201ENST00000343035 830 ntAPPRIS P1 TSL 5 BASIC18.65■□□□□ 0.58
CCND1P24385 GLRB-205ENST00000512619 728 ntTSL 3 BASIC18.65■□□□□ 0.58
CCND1P24385 AC015712.2-203ENST00000560461 688 ntTSL 3 BASIC18.65■□□□□ 0.58
CCND1P24385 AC131212.4-201ENST00000623606 975 ntBASIC18.65■□□□□ 0.58
CCND1P24385 CROCCP4-202ENST00000633627 573 ntTSL 3 BASIC18.65■□□□□ 0.58
CCND1P24385 MTHFD2L-203ENST00000395759 2354 ntAPPRIS P2 TSL 5 BASIC18.65■□□□□ 0.58
CCND1P24385 FGFR1-206ENST00000397091 5702 ntAPPRIS ALT1 TSL 1 (best) BASIC18.65■□□□□ 0.58
CCND1P24385 PANX1-202ENST00000436171 2750 ntAPPRIS ALT1 TSL 1 (best) BASIC18.65■□□□□ 0.58
CCND1P24385 NUDT9-201ENST00000302174 1701 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
CCND1P24385 TREX2-203ENST00000338525 2116 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
CCND1P24385 RAB11FIP2-201ENST00000355624 6061 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
CCND1P24385 ZNF853-201ENST00000457543 3857 ntAPPRIS P1 TSL 3 BASIC18.65■□□□□ 0.58
CCND1P24385 NPBWR1-201ENST00000331251 2687 ntAPPRIS P1 BASIC18.65■□□□□ 0.58
Retrieved 100 of 98,524 protein–RNA pairs in 48.7 ms