Protein–RNA interactions for Protein: P13994

CCDC130, Coiled-coil domain-containing protein 130, humanhuman

Predictions only

Length 396 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC130P13994 GALNT13-201ENST00000392825 5536 ntAPPRIS P1 TSL 2 BASIC19.65■□□□□ 0.74
CCDC130P13994 NAT8L-201ENST00000331662 5571 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
CCDC130P13994 ARRB1-201ENST00000360025 1895 ntAPPRIS P3 TSL 1 (best) BASIC19.65■□□□□ 0.74
CCDC130P13994 FBXL18-205ENST00000620087 2076 ntTSL 5 BASIC19.64■□□□□ 0.74
CCDC130P13994 LSM12-201ENST00000293406 2308 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.74
CCDC130P13994 ANKDD1B-204ENST00000601380 2569 ntAPPRIS P1 TSL 5 BASIC19.64■□□□□ 0.73
CCDC130P13994 COPE-203ENST00000351079 907 ntTSL 2 BASIC19.64■□□□□ 0.73
CCDC130P13994 FAM19A3-201ENST00000361886 1056 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
CCDC130P13994 CD1E-211ENST00000368166 1271 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
CCDC130P13994 LCE3D-201ENST00000368787 613 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
CCDC130P13994 SAPCD2P2-201ENST00000431719 1174 ntBASIC19.64■□□□□ 0.73
CCDC130P13994 KRT18P41-201ENST00000518924 1277 ntBASIC19.64■□□□□ 0.73
CCDC130P13994 RPL26L1-205ENST00000519974 695 ntAPPRIS P1 TSL 3 BASIC19.64■□□□□ 0.73
CCDC130P13994 NEK7-207ENST00000538004 1036 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
CCDC130P13994 LINC01238-205ENST00000567549 1107 ntBASIC19.64■□□□□ 0.73
CCDC130P13994 MIR3917-201ENST00000580971 93 ntBASIC19.64■□□□□ 0.73
CCDC130P13994 AC015961.2-201ENST00000589281 701 ntTSL 3 BASIC19.64■□□□□ 0.73
CCDC130P13994 CD177-202ENST00000607855 536 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
CCDC130P13994 MYC-208ENST00000641036 567 ntBASIC19.64■□□□□ 0.73
CCDC130P13994 NOL3-211ENST00000568146 1351 ntAPPRIS ALT2 TSL 1 (best) BASIC19.64■□□□□ 0.73
CCDC130P13994 CIRBP-202ENST00000413636 1606 ntTSL 2 BASIC19.64■□□□□ 0.73
CCDC130P13994 FADS1-204ENST00000433932 1690 ntTSL 2 BASIC19.64■□□□□ 0.73
CCDC130P13994 STX11-201ENST00000367568 1926 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
CCDC130P13994 CCDC50-202ENST00000392456 2454 ntAPPRIS P4 TSL 1 (best) BASIC19.64■□□□□ 0.73
CCDC130P13994 LRCH4-201ENST00000310300 2552 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
CCDC130P13994 SLC38A10-201ENST00000288439 2708 ntAPPRIS P3 TSL 1 (best) BASIC19.64■□□□□ 0.73
CCDC130P13994 SPATA20-226ENST00000619622 2769 ntAPPRIS P2 TSL 5 BASIC19.63■□□□□ 0.73
CCDC130P13994 COL4A3BP-201ENST00000261415 2262 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
CCDC130P13994 AC005082.1-201ENST00000413042 2259 ntBASIC19.63■□□□□ 0.73
CCDC130P13994 ENTPD8-202ENST00000371506 2222 ntAPPRIS P1 TSL 5 BASIC19.63■□□□□ 0.73
CCDC130P13994 ELMOD1-202ENST00000443271 1990 ntAPPRIS P1 TSL 2 BASIC19.63■□□□□ 0.73
CCDC130P13994 MAP3K7CL-206ENST00000399928 1904 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
CCDC130P13994 AP001351.1-201ENST00000501397 1865 ntTSL 2 BASIC19.63■□□□□ 0.73
CCDC130P13994 SEMA3B-202ENST00000418576 1765 ntTSL 2 BASIC19.63■□□□□ 0.73
CCDC130P13994 MTSS1L-201ENST00000338779 4992 ntAPPRIS P2 TSL 1 (best) BASIC19.63■□□□□ 0.73
CCDC130P13994 MED25-212ENST00000618715 1467 ntTSL 5 BASIC19.63■□□□□ 0.73
CCDC130P13994 LY6E-203ENST00000517503 1335 ntAPPRIS ALT2 TSL 3 BASIC19.63■□□□□ 0.73
CCDC130P13994 PYDC1-201ENST00000302964 813 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
CCDC130P13994 UXT-201ENST00000333119 574 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
CCDC130P13994 SNCB-202ENST00000393693 1234 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
CCDC130P13994 AC034232.1-201ENST00000506026 1064 ntBASIC19.63■□□□□ 0.73
CCDC130P13994 DUX4-205ENST00000570263 768 ntAPPRIS ALT2 TSL 1 (best) BASIC19.63■□□□□ 0.73
CCDC130P13994 AC087388.1-201ENST00000571370 1112 ntBASIC19.63■□□□□ 0.73
CCDC130P13994 AC243829.1-201ENST00000615128 1059 ntTSL 2 BASIC19.63■□□□□ 0.73
CCDC130P13994 DFFB-212ENST00000625756 649 ntTSL 5 BASIC19.63■□□□□ 0.73
CCDC130P13994 DLGAP4-206ENST00000475894 3110 ntAPPRIS ALT2 TSL 2 BASIC19.63■□□□□ 0.73
CCDC130P13994 LTBP4-201ENST00000204005 5032 ntAPPRIS ALT2 TSL 1 (best) BASIC19.63■□□□□ 0.73
CCDC130P13994 PPP1R3F-202ENST00000376188 2443 ntTSL 2 BASIC19.63■□□□□ 0.73
CCDC130P13994 WNT10B-201ENST00000301061 2274 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
CCDC130P13994 SLC6A9-201ENST00000357730 2168 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
CCDC130P13994 GRB10-201ENST00000335866 5032 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
CCDC130P13994 TBX20-201ENST00000408931 1871 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
CCDC130P13994 GUCA1A-201ENST00000053469 1874 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
CCDC130P13994 PCED1A-201ENST00000356872 1706 ntTSL 2 BASIC19.62■□□□□ 0.73
CCDC130P13994 SLC1A6-210ENST00000600144 1735 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
CCDC130P13994 AC004408.2-201ENST00000623613 2777 ntBASIC19.62■□□□□ 0.73
CCDC130P13994 SYN2-206ENST00000621198 2674 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
CCDC130P13994 ETV4-201ENST00000319349 2429 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
CCDC130P13994 PCDHB14-202ENST00000624896 2367 ntTSL 2 BASIC19.62■□□□□ 0.73
CCDC130P13994 RTN4-201ENST00000317610 2333 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
CCDC130P13994 ZBTB48-202ENST00000377674 2293 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
CCDC130P13994 EPB41L4B-201ENST00000374557 4006 ntAPPRIS ALT2 TSL 1 (best) BASIC19.62■□□□□ 0.73
CCDC130P13994 LINC01819-201ENST00000422351 2156 ntTSL 5 BASIC19.62■□□□□ 0.73
CCDC130P13994 ARMC10P1-201ENST00000313754 855 ntBASIC19.62■□□□□ 0.73
CCDC130P13994 ZMYM5-203ENST00000382907 1092 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
CCDC130P13994 TTC3-203ENST00000399010 2115 ntTSL 5 BASIC19.62■□□□□ 0.73
CCDC130P13994 GGT1-205ENST00000403838 1033 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
CCDC130P13994 AC112907.2-201ENST00000448639 330 ntBASIC19.62■□□□□ 0.73
CCDC130P13994 AC092597.1-201ENST00000487352 616 ntBASIC19.62■□□□□ 0.73
CCDC130P13994 MOK-234ENST00000524370 1165 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
CCDC130P13994 SMIM8-209ENST00000608868 815 ntAPPRIS P1 TSL 5 BASIC19.62■□□□□ 0.73
CCDC130P13994 SMIM29-209ENST00000636500 1186 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
CCDC130P13994 TRAM1L1-201ENST00000310754 2023 ntAPPRIS P1 BASIC19.62■□□□□ 0.73
CCDC130P13994 ACHE-205ENST00000419336 1906 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
CCDC130P13994 JAM2-202ENST00000400532 1757 ntAPPRIS ALT2 TSL 1 (best) BASIC19.62■□□□□ 0.73
CCDC130P13994 PNMA8B-202ENST00000599531 5308 ntAPPRIS P1 BASIC19.62■□□□□ 0.73
CCDC130P13994 MARK1-202ENST00000366918 5169 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
CCDC130P13994 RGS3-231ENST00000613049 1726 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
CCDC130P13994 PKMYT1-203ENST00000431515 2308 ntTSL 2 BASIC19.62■□□□□ 0.73
CCDC130P13994 SMARCC2-203ENST00000394023 4271 ntAPPRIS ALT2 TSL 1 (best) BASIC19.62■□□□□ 0.73
CCDC130P13994 WDR90-201ENST00000293879 5488 ntAPPRIS P2 TSL 5 BASIC19.62■□□□□ 0.73
CCDC130P13994 SLC12A4-202ENST00000422611 4670 ntTSL 2 BASIC19.61■□□□□ 0.73
CCDC130P13994 KLC1-217ENST00000554280 2426 ntTSL 5 BASIC19.61■□□□□ 0.73
CCDC130P13994 CHTOP-202ENST00000368687 1094 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
CCDC130P13994 AL671277.2-201ENST00000458060 996 ntBASIC19.61■□□□□ 0.73
CCDC130P13994 AP003396.1-201ENST00000501918 507 ntTSL 5 BASIC19.61■□□□□ 0.73
CCDC130P13994 AF250324.1-201ENST00000506276 703 ntTSL 3 BASIC19.61■□□□□ 0.73
CCDC130P13994 IFI27L2-206ENST00000556727 556 ntTSL 3 BASIC19.61■□□□□ 0.73
CCDC130P13994 IFRD2-204ENST00000436390 2275 ntAPPRIS P1 TSL 2 BASIC19.61■□□□□ 0.73
CCDC130P13994 MYO15B-232ENST00000610510 9195 ntAPPRIS P1 TSL 5 BASIC19.61■□□□□ 0.73
CCDC130P13994 PSMD3-201ENST00000264639 2158 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
CCDC130P13994 CALHM3-201ENST00000369783 1652 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
CCDC130P13994 ELP5-204ENST00000396628 1423 ntAPPRIS P2 TSL 1 (best) BASIC19.6■□□□□ 0.73
CCDC130P13994 CORO6-212ENST00000584969 1416 ntAPPRIS ALT1 TSL 5 BASIC19.6■□□□□ 0.73
CCDC130P13994 SIKE1-201ENST00000060969 2190 ntAPPRIS P3 TSL 1 (best) BASIC19.6■□□□□ 0.73
CCDC130P13994 AP5S1-202ENST00000379567 1791 ntAPPRIS P1 TSL 2 BASIC19.6■□□□□ 0.73
CCDC130P13994 DEF8-211ENST00000563795 1767 ntTSL 5 BASIC19.6■□□□□ 0.73
CCDC130P13994 SCAND1-203ENST00000615116 1371 ntAPPRIS P1 TSL 5 BASIC19.6■□□□□ 0.73
CCDC130P13994 LARGE2-202ENST00000401752 2516 ntAPPRIS P3 TSL 1 (best) BASIC19.6■□□□□ 0.73
CCDC130P13994 WFDC1-203ENST00000568638 1319 ntAPPRIS P1 TSL 2 BASIC19.6■□□□□ 0.73
Retrieved 100 of 98,524 protein–RNA pairs in 20.1 ms