Protein–RNA interactions for Protein: P0DMR1

HNRNPCL4, Heterogeneous nuclear ribonucleoprotein C-like 4, humanhuman

Predictions only

Length 293 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HNRNPCL4P0DMR1 CABIN1-202ENST00000337989 2422 ntAPPRIS ALT2 TSL 1 (best) BASIC17.25■□□□□ 0.35
HNRNPCL4P0DMR1 CYP2D6-201ENST00000359033 1433 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
HNRNPCL4P0DMR1 ARHGEF28-203ENST00000426542 6118 ntAPPRIS ALT2 TSL 1 (best) BASIC17.25■□□□□ 0.35
HNRNPCL4P0DMR1 MIR564-202ENST00000385049 94 ntBASIC17.25■□□□□ 0.35
HNRNPCL4P0DMR1 TRPT1-203ENST00000394547 865 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
HNRNPCL4P0DMR1 RPS2P55-201ENST00000397318 883 ntBASIC17.25■□□□□ 0.35
HNRNPCL4P0DMR1 POLR2D-202ENST00000409698 806 ntTSL 2 BASIC17.25■□□□□ 0.35
HNRNPCL4P0DMR1 MFAP1P1-201ENST00000442257 1255 ntBASIC17.25■□□□□ 0.35
HNRNPCL4P0DMR1 AC107956.1-201ENST00000494359 873 ntBASIC17.25■□□□□ 0.35
HNRNPCL4P0DMR1 DLEU7-203ENST00000504404 1122 ntAPPRIS ALT2 TSL 1 (best) BASIC17.25■□□□□ 0.35
HNRNPCL4P0DMR1 LARGE2-201ENST00000325468 2522 ntAPPRIS P3 TSL 1 (best) BASIC17.25■□□□□ 0.35
HNRNPCL4P0DMR1 PRSS23-201ENST00000280258 4015 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
HNRNPCL4P0DMR1 AC139491.1-201ENST00000512675 1516 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
HNRNPCL4P0DMR1 PRKAR2A-201ENST00000265563 6471 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
HNRNPCL4P0DMR1 GPRC5B-201ENST00000300571 5213 ntAPPRIS P2 TSL 1 (best) BASIC17.25■□□□□ 0.35
HNRNPCL4P0DMR1 RASSF1-201ENST00000327761 1757 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
HNRNPCL4P0DMR1 TBC1D3P2-202ENST00000577902 1649 ntBASIC17.25■□□□□ 0.35
HNRNPCL4P0DMR1 EHMT1-203ENST00000460843 5137 ntAPPRIS P2 TSL 5 BASIC17.25■□□□□ 0.35
HNRNPCL4P0DMR1 OGFOD2-222ENST00000545317 1481 ntTSL 2 BASIC17.24■□□□□ 0.35
HNRNPCL4P0DMR1 MAPRE3-201ENST00000233121 1892 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
HNRNPCL4P0DMR1 SEC61A2-201ENST00000298428 1893 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
HNRNPCL4P0DMR1 ADGRG2-208ENST00000379873 4698 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
HNRNPCL4P0DMR1 GPATCH3-201ENST00000361720 2123 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
HNRNPCL4P0DMR1 FAM110A-203ENST00000381939 1737 ntAPPRIS P1 TSL 3 BASIC17.24■□□□□ 0.35
HNRNPCL4P0DMR1 SYT15-205ENST00000503753 1331 ntAPPRIS ALT2 TSL 1 (best) BASIC17.24■□□□□ 0.35
HNRNPCL4P0DMR1 TNPO2-201ENST00000356861 4962 ntAPPRIS ALT1 TSL 1 (best) BASIC17.24■□□□□ 0.35
HNRNPCL4P0DMR1 PPP2R2B-203ENST00000394411 2071 ntAPPRIS P1 TSL 2 BASIC17.24■□□□□ 0.35
HNRNPCL4P0DMR1 ABHD17AP1-201ENST00000358206 933 ntBASIC17.24■□□□□ 0.35
HNRNPCL4P0DMR1 PEX7-202ENST00000367756 680 ntTSL 3 BASIC17.24■□□□□ 0.35
HNRNPCL4P0DMR1 BUB3-202ENST00000368859 667 ntTSL 3 BASIC17.24■□□□□ 0.35
HNRNPCL4P0DMR1 AP000593.1-201ENST00000393668 712 ntBASIC17.24■□□□□ 0.35
HNRNPCL4P0DMR1 AL023284.2-201ENST00000405850 579 ntBASIC17.24■□□□□ 0.35
HNRNPCL4P0DMR1 SERTAD4-AS1-201ENST00000437764 726 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
HNRNPCL4P0DMR1 CA15P1-201ENST00000481698 905 ntBASIC17.24■□□□□ 0.35
HNRNPCL4P0DMR1 IGHMBP2-205ENST00000539224 785 ntTSL 3 BASIC17.24■□□□□ 0.35
HNRNPCL4P0DMR1 AC100835.1-201ENST00000565737 498 ntTSL 5 BASIC17.24■□□□□ 0.35
HNRNPCL4P0DMR1 GRAP-204ENST00000573099 846 ntTSL 3 BASIC17.24■□□□□ 0.35
HNRNPCL4P0DMR1 BRMS1L-201ENST00000216807 2657 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
HNRNPCL4P0DMR1 EFEMP2-210ENST00000528176 1504 ntTSL 5 BASIC17.24■□□□□ 0.35
HNRNPCL4P0DMR1 FZD1-201ENST00000287934 6963 ntAPPRIS P1 BASIC17.24■□□□□ 0.35
HNRNPCL4P0DMR1 SLC39A5-201ENST00000266980 2031 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
HNRNPCL4P0DMR1 SHKBP1-201ENST00000291842 2363 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
HNRNPCL4P0DMR1 RUBCN-206ENST00000449205 1603 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
HNRNPCL4P0DMR1 RSPO4-201ENST00000217260 2707 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
HNRNPCL4P0DMR1 SLC35E4-201ENST00000343605 2714 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
HNRNPCL4P0DMR1 ZNF668-202ENST00000394983 2717 ntAPPRIS P1 TSL 5 BASIC17.24■□□□□ 0.35
HNRNPCL4P0DMR1 STK25-203ENST00000403346 2210 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
HNRNPCL4P0DMR1 IFNLR1-202ENST00000327575 1476 ntAPPRIS ALT2 TSL 1 (best) BASIC17.24■□□□□ 0.35
HNRNPCL4P0DMR1 SOST-201ENST00000301691 2300 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
HNRNPCL4P0DMR1 CCDC43-201ENST00000315286 2082 ntAPPRIS P2 TSL 1 (best) BASIC17.24■□□□□ 0.35
HNRNPCL4P0DMR1 CTNNBL1-204ENST00000405275 2076 ntTSL 5 BASIC17.24■□□□□ 0.35
HNRNPCL4P0DMR1 SLC37A2-203ENST00000403796 2910 ntAPPRIS ALT1 TSL 2 BASIC17.24■□□□□ 0.35
HNRNPCL4P0DMR1 HIPK1-207ENST00000369561 3777 ntTSL 5 BASIC17.24■□□□□ 0.35
HNRNPCL4P0DMR1 FAM222A-202ENST00000538780 3294 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
HNRNPCL4P0DMR1 MINPP1-201ENST00000371994 2183 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
HNRNPCL4P0DMR1 ENTPD6-202ENST00000360031 2766 ntAPPRIS ALT2 TSL 1 (best) BASIC17.23■□□□□ 0.35
HNRNPCL4P0DMR1 GUCA1A-205ENST00000541991 1921 ntTSL 5 BASIC17.23■□□□□ 0.35
HNRNPCL4P0DMR1 SEMA6C-210ENST00000621728 1918 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
HNRNPCL4P0DMR1 DENND2A-201ENST00000275884 3735 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
HNRNPCL4P0DMR1 CDK4-202ENST00000312990 1650 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
HNRNPCL4P0DMR1 SEC14L2-215ENST00000617837 2632 ntTSL 2 BASIC17.23■□□□□ 0.35
HNRNPCL4P0DMR1 ESPN-216ENST00000636330 4731 ntAPPRIS ALT2 TSL 5 BASIC17.23■□□□□ 0.35
HNRNPCL4P0DMR1 CCK-202ENST00000396169 1527 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
HNRNPCL4P0DMR1 PACSIN2-203ENST00000402229 1883 ntAPPRIS P1 TSL 5 BASIC17.23■□□□□ 0.35
HNRNPCL4P0DMR1 RASA4B-201ENST00000306682 2589 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
HNRNPCL4P0DMR1 WIPF1-206ENST00000409891 2568 ntAPPRIS ALT2 TSL 1 (best) BASIC17.23■□□□□ 0.35
HNRNPCL4P0DMR1 PPM1G-201ENST00000344034 2311 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
HNRNPCL4P0DMR1 HARBI1-201ENST00000326737 1967 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
HNRNPCL4P0DMR1 AL360181.5-201ENST00000368554 1044 ntAPPRIS P1 TSL 2 BASIC17.23■□□□□ 0.35
HNRNPCL4P0DMR1 TMEM240-201ENST00000378733 718 ntAPPRIS P1 TSL 2 BASIC17.23■□□□□ 0.35
HNRNPCL4P0DMR1 CCDC74B-204ENST00000409234 871 ntAPPRIS ALT2 TSL 1 (best) BASIC17.23■□□□□ 0.35
HNRNPCL4P0DMR1 AC012618.2-201ENST00000428058 849 ntBASIC17.23■□□□□ 0.35
HNRNPCL4P0DMR1 MCCD1P1-208ENST00000445732 328 ntBASIC17.23■□□□□ 0.35
HNRNPCL4P0DMR1 USP46-AS1-201ENST00000503051 1048 ntTSL 3 BASIC17.23■□□□□ 0.35
HNRNPCL4P0DMR1 AC097488.1-201ENST00000507834 756 ntBASIC17.23■□□□□ 0.35
HNRNPCL4P0DMR1 AC117500.4-201ENST00000542797 617 ntTSL 3 BASIC17.23■□□□□ 0.35
HNRNPCL4P0DMR1 CIRBP-217ENST00000588230 1013 ntTSL 5 BASIC17.23■□□□□ 0.35
HNRNPCL4P0DMR1 PCDH7-201ENST00000361762 6403 ntAPPRIS P3 TSL 1 (best) BASIC17.23■□□□□ 0.35
HNRNPCL4P0DMR1 PRMT1-201ENST00000391851 1393 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
HNRNPCL4P0DMR1 AVL9-209ENST00000640103 1367 ntTSL 5 BASIC17.23■□□□□ 0.35
HNRNPCL4P0DMR1 ACAP3-202ENST00000354700 3896 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
HNRNPCL4P0DMR1 VMAC-201ENST00000339485 2254 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
HNRNPCL4P0DMR1 NUDT17-201ENST00000334513 1473 ntAPPRIS P1 TSL 5 BASIC17.23■□□□□ 0.35
HNRNPCL4P0DMR1 C12orf65-202ENST00000366329 1901 ntAPPRIS P2 TSL 2 BASIC17.23■□□□□ 0.35
HNRNPCL4P0DMR1 NOP9-202ENST00000396802 1942 ntTSL 5 BASIC17.23■□□□□ 0.35
HNRNPCL4P0DMR1 ASCC2-202ENST00000397771 2823 ntAPPRIS P1 TSL 5 BASIC17.23■□□□□ 0.35
HNRNPCL4P0DMR1 PGR-201ENST00000263463 2496 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
HNRNPCL4P0DMR1 SPART-209ENST00000494062 3018 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
HNRNPCL4P0DMR1 IAH1-202ENST00000470914 2137 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
HNRNPCL4P0DMR1 INO80E-207ENST00000563197 2103 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
HNRNPCL4P0DMR1 C19orf25-207ENST00000588871 2128 ntTSL 5 BASIC17.23■□□□□ 0.35
HNRNPCL4P0DMR1 RAPH1-211ENST00000457812 2673 ntAPPRIS ALT2 TSL 2 BASIC17.23■□□□□ 0.35
HNRNPCL4P0DMR1 TTLL3-209ENST00000426895 2767 ntAPPRIS P2 TSL 2 BASIC17.23■□□□□ 0.35
HNRNPCL4P0DMR1 CDK10-202ENST00000353379 1798 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
HNRNPCL4P0DMR1 ADGRG2-209ENST00000379876 4779 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
HNRNPCL4P0DMR1 CIRBP-202ENST00000413636 1606 ntTSL 2 BASIC17.22■□□□□ 0.35
HNRNPCL4P0DMR1 FBXL15-201ENST00000224862 2362 ntAPPRIS P2 TSL 1 (best) BASIC17.22■□□□□ 0.35
HNRNPCL4P0DMR1 PPP1R7-201ENST00000234038 2386 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
HNRNPCL4P0DMR1 EGFL6-202ENST00000380602 2385 ntAPPRIS ALT2 TSL 1 (best) BASIC17.22■□□□□ 0.35
HNRNPCL4P0DMR1 AC087500.1-202ENST00000571689 1715 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
Retrieved 100 of 98,524 protein–RNA pairs in 35.4 ms