Protein–RNA interactions for Protein: P09496

CLTA, Clathrin light chain A, humanhuman

Predictions only

Length 248 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLTAP09496 ZNF420-201ENST00000304239 1945 ntTSL 2 BASIC20.28■□□□□ 0.84
CLTAP09496 CTBP2-214ENST00000531469 1918 ntAPPRIS P1 TSL 2 BASIC20.28■□□□□ 0.84
CLTAP09496 LCE4A-202ENST00000368777 672 ntAPPRIS P1 TSL 2 BASIC20.28■□□□□ 0.84
CLTAP09496 YPEL3-201ENST00000398838 935 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
CLTAP09496 PLCB1-204ENST00000404098 1260 ntTSL 3 BASIC20.28■□□□□ 0.84
CLTAP09496 AL161452.1-201ENST00000415062 1117 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
CLTAP09496 TMA7-201ENST00000438607 561 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
CLTAP09496 AC013402.1-201ENST00000456999 561 ntTSL 4 BASIC20.28■□□□□ 0.84
CLTAP09496 DRAP1-205ENST00000527119 581 ntTSL 5 BASIC20.28■□□□□ 0.84
CLTAP09496 REEP1-207ENST00000535845 1196 ntTSL 2 BASIC20.28■□□□□ 0.84
CLTAP09496 TMEM220-AS1-201ENST00000579114 575 ntTSL 4 BASIC20.28■□□□□ 0.84
CLTAP09496 BVES-AS1-203ENST00000580511 853 ntTSL 5 BASIC20.28■□□□□ 0.84
CLTAP09496 DNAJB6-218ENST00000634080 1005 ntTSL 2 BASIC20.28■□□□□ 0.84
CLTAP09496 YPEL3-202ENST00000398841 1588 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
CLTAP09496 RBFOX1-204ENST00000422070 1684 ntTSL 2 BASIC20.28■□□□□ 0.84
CLTAP09496 SMARCC1-201ENST00000254480 6375 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
CLTAP09496 TULP1-201ENST00000229771 2162 ntAPPRIS P2 TSL 1 (best) BASIC20.28■□□□□ 0.84
CLTAP09496 AGTR1-201ENST00000349243 2356 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
CLTAP09496 CRADD-202ENST00000542893 1403 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
CLTAP09496 HOXB1-202ENST00000577092 1414 ntBASIC20.27■□□□□ 0.84
CLTAP09496 PLPP4-202ENST00000398250 1521 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
CLTAP09496 TOX2-205ENST00000423191 1709 ntTSL 2 BASIC20.27■□□□□ 0.84
CLTAP09496 MAGED2-213ENST00000627068 1811 ntAPPRIS ALT2 TSL 5 BASIC20.27■□□□□ 0.84
CLTAP09496 CMTM7-201ENST00000334983 2038 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
CLTAP09496 UNG-202ENST00000336865 2130 ntAPPRIS ALT2 TSL 1 (best) BASIC20.27■□□□□ 0.84
CLTAP09496 SEMA7A-203ENST00000543145 2304 ntTSL 2 BASIC20.27■□□□□ 0.84
CLTAP09496 FAM213B-205ENST00000444521 2827 ntAPPRIS ALT2 TSL 2 BASIC20.27■□□□□ 0.84
CLTAP09496 ZNF12-204ENST00000405858 5051 ntAPPRIS P4 TSL 1 (best) BASIC20.27■□□□□ 0.84
CLTAP09496 SMPD1-203ENST00000527275 2188 ntAPPRIS P3 TSL 2 BASIC20.27■□□□□ 0.84
CLTAP09496 P2RX5-203ENST00000547178 1998 ntAPPRIS ALT2 TSL 1 (best) BASIC20.27■□□□□ 0.84
CLTAP09496 NFYC-AS1-201ENST00000606277 1687 ntBASIC20.27■□□□□ 0.84
CLTAP09496 MFSD1-201ENST00000264266 1594 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
CLTAP09496 ARHGAP8-202ENST00000356099 1584 ntAPPRIS P3 TSL 1 (best) BASIC20.27■□□□□ 0.84
CLTAP09496 ZMYM5-202ENST00000382905 1382 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
CLTAP09496 PEX11G-201ENST00000221480 1062 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
CLTAP09496 UBL5-201ENST00000358666 513 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
CLTAP09496 GUK1-204ENST00000366721 689 ntTSL 3 BASIC20.27■□□□□ 0.84
CLTAP09496 KRTAP5-10-201ENST00000398531 1176 ntAPPRIS P1 BASIC20.27■□□□□ 0.84
CLTAP09496 DMKN-208ENST00000424570 1293 ntAPPRIS ALT2 TSL 1 (best) BASIC20.27■□□□□ 0.84
CLTAP09496 AL136307.1-201ENST00000454882 411 ntTSL 2 BASIC20.27■□□□□ 0.84
CLTAP09496 AC004080.5-201ENST00000498652 368 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
CLTAP09496 AC008825.1-201ENST00000504398 452 ntTSL 3 BASIC20.27■□□□□ 0.84
CLTAP09496 KRT18P35-201ENST00000510488 1269 ntBASIC20.27■□□□□ 0.84
CLTAP09496 AC021739.3-201ENST00000557908 855 ntTSL 2 BASIC20.27■□□□□ 0.84
CLTAP09496 DCTN5-208ENST00000568589 772 ntTSL 2 BASIC20.27■□□□□ 0.84
CLTAP09496 NTF6B-201ENST00000591913 560 ntBASIC20.27■□□□□ 0.84
CLTAP09496 AL445228.2-201ENST00000605589 952 ntBASIC20.27■□□□□ 0.84
CLTAP09496 AC024243.1-201ENST00000609234 778 ntBASIC20.27■□□□□ 0.84
CLTAP09496 MCTP1-218ENST00000515393 5396 ntAPPRIS P3 TSL 1 (best) BASIC20.27■□□□□ 0.84
CLTAP09496 TMEM179-201ENST00000341595 2513 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
CLTAP09496 CTNNBL1-201ENST00000361383 1925 ntAPPRIS P2 TSL 1 (best) BASIC20.27■□□□□ 0.84
CLTAP09496 PGAM1-201ENST00000334828 1830 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
CLTAP09496 AC034236.2-201ENST00000606662 1610 ntBASIC20.27■□□□□ 0.83
CLTAP09496 NCF1B-201ENST00000423083 1516 ntTSL 2 BASIC20.27■□□□□ 0.83
CLTAP09496 MTMR9LP-203ENST00000426597 1545 ntBASIC20.27■□□□□ 0.83
CLTAP09496 BDKRB1-202ENST00000553356 1526 ntTSL 1 (best) BASIC20.27■□□□□ 0.83
CLTAP09496 ADCY5-202ENST00000462833 7311 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.83
CLTAP09496 P2RY6-212ENST00000618468 2431 ntAPPRIS P1 TSL 3 BASIC20.26■□□□□ 0.83
CLTAP09496 ZDHHC20-201ENST00000320220 1351 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
CLTAP09496 CROCCP3-202ENST00000420820 1947 ntBASIC20.26■□□□□ 0.83
CLTAP09496 AL357033.4-201ENST00000617703 1807 ntBASIC20.26■□□□□ 0.83
CLTAP09496 LCE3D-201ENST00000368787 613 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
CLTAP09496 ST6GALNAC4P1-201ENST00000435385 499 ntBASIC20.26■□□□□ 0.83
CLTAP09496 KRT18P23-201ENST00000435622 1283 ntBASIC20.26■□□□□ 0.83
CLTAP09496 AL445472.1-201ENST00000452532 1007 ntTSL 2 BASIC20.26■□□□□ 0.83
CLTAP09496 CCNG1-211ENST00000512163 919 ntTSL 2 BASIC20.26■□□□□ 0.83
CLTAP09496 AZIN1-AS1-214ENST00000522850 473 ntTSL 3 BASIC20.26■□□□□ 0.83
CLTAP09496 CD81-212ENST00000526072 1172 ntTSL 5 BASIC20.26■□□□□ 0.83
CLTAP09496 YIPF2-209ENST00000590329 958 ntTSL 5 BASIC20.26■□□□□ 0.83
CLTAP09496 PTGIR-204ENST00000596260 1009 ntTSL 2 BASIC20.26■□□□□ 0.83
CLTAP09496 C10orf142-201ENST00000619243 1110 ntAPPRIS P2 TSL 2 BASIC20.26■□□□□ 0.83
CLTAP09496 SSC5D-201ENST00000389623 4845 ntAPPRIS P3 TSL 1 (best) BASIC20.26■□□□□ 0.83
CLTAP09496 AIRE-201ENST00000291582 2257 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
CLTAP09496 PTPRE-201ENST00000254667 5331 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
CLTAP09496 CACNA1B-203ENST00000371355 9647 ntAPPRIS ALT2 TSL 5 BASIC20.26■□□□□ 0.83
CLTAP09496 TMEM176A-210ENST00000484928 1530 ntAPPRIS P2 TSL 5 BASIC20.26■□□□□ 0.83
CLTAP09496 PNKP-224ENST00000631020 1545 ntTSL 5 BASIC20.26■□□□□ 0.83
CLTAP09496 AZIN1-201ENST00000337198 4721 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
CLTAP09496 RAB29-205ENST00000446390 1441 ntTSL 2 BASIC20.26■□□□□ 0.83
CLTAP09496 KLHDC4-227ENST00000622456 1422 ntTSL 5 BASIC20.26■□□□□ 0.83
CLTAP09496 ISYNA1-206ENST00000578963 1691 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
CLTAP09496 ZNF394-203ENST00000426306 2017 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
CLTAP09496 ADAMTS8-201ENST00000257359 4010 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
CLTAP09496 MIB2-203ENST00000378712 2890 ntTSL 2 BASIC20.25■□□□□ 0.83
CLTAP09496 LTBP1-203ENST00000404816 6333 ntAPPRIS P4 TSL 5 BASIC20.25■□□□□ 0.83
CLTAP09496 SEMA3D-202ENST00000444867 1605 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
CLTAP09496 RILPL2-201ENST00000280571 6141 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
CLTAP09496 PYDC1-201ENST00000302964 813 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
CLTAP09496 COMTD1-201ENST00000372538 976 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
CLTAP09496 AC114763.1-202ENST00000414911 867 ntTSL 3 BASIC20.25■□□□□ 0.83
CLTAP09496 HDAC11-AS1-201ENST00000424112 515 ntTSL 2 BASIC20.25■□□□□ 0.83
CLTAP09496 MAGI2-AS3-203ENST00000424477 520 ntTSL 4 BASIC20.25■□□□□ 0.83
CLTAP09496 SEC1P-202ENST00000473944 940 ntBASIC20.25■□□□□ 0.83
CLTAP09496 C12orf43-206ENST00000537817 1270 ntAPPRIS ALT2 TSL 1 (best) BASIC20.25■□□□□ 0.83
CLTAP09496 ZNF534-205ENST00000617900 1085 ntTSL 2 BASIC20.25■□□□□ 0.83
CLTAP09496 IRS2-201ENST00000375856 8138 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
CLTAP09496 TAPT1-201ENST00000405303 4591 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
CLTAP09496 SLC27A4-202ENST00000372870 1557 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
CLTAP09496 SYBU-232ENST00000533171 2498 ntAPPRIS ALT2 TSL 2 BASIC20.25■□□□□ 0.83
CLTAP09496 LDHD-202ENST00000450168 1966 ntAPPRIS ALT2 TSL 1 (best) BASIC20.25■□□□□ 0.83
Retrieved 100 of 98,524 protein–RNA pairs in 24.4 ms