Protein–RNA interactions for Protein: P05166

PCCB, Propionyl-CoA carboxylase beta chain, mitochondrial, humanhuman

Predictions only

Length 539 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCCBP05166 AC020661.1-201ENST00000503052 1584 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
PCCBP05166 SLC25A47-201ENST00000361529 1738 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
PCCBP05166 LDHAL6A-202ENST00000396213 1716 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
PCCBP05166 REEP2-201ENST00000254901 2099 ntAPPRIS P3 TSL 1 (best) BASIC18.37■□□□□ 0.53
PCCBP05166 SNAI3-AS1-205ENST00000568633 2096 ntBASIC18.37■□□□□ 0.53
PCCBP05166 TTC3-203ENST00000399010 2115 ntTSL 5 BASIC18.37■□□□□ 0.53
PCCBP05166 AIPL1-209ENST00000575265 2111 ntAPPRIS ALT2 TSL 1 (best) BASIC18.37■□□□□ 0.53
PCCBP05166 OLFM1-205ENST00000371796 2492 ntTSL 2 BASIC18.37■□□□□ 0.53
PCCBP05166 SMAD7-201ENST00000262158 3087 ntAPPRIS P3 TSL 1 (best) BASIC18.36■□□□□ 0.53
PCCBP05166 KCNC3-203ENST00000477616 3176 ntAPPRIS P2 TSL 1 (best) BASIC18.36■□□□□ 0.53
PCCBP05166 ANKRD24-201ENST00000262970 3711 ntAPPRIS ALT2 TSL 5 BASIC18.36■□□□□ 0.53
PCCBP05166 CPQ-201ENST00000220763 1947 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
PCCBP05166 OGFOD2-201ENST00000228922 1780 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
PCCBP05166 IMPAD1-201ENST00000262644 7199 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
PCCBP05166 INSM1-201ENST00000310227 2829 ntAPPRIS P1 BASIC18.36■□□□□ 0.53
PCCBP05166 CD55-201ENST00000314754 2220 ntAPPRIS ALT2 TSL 1 (best) BASIC18.36■□□□□ 0.53
PCCBP05166 ZFAND2A-201ENST00000316495 860 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
PCCBP05166 SEPT6-202ENST00000354228 1576 ntAPPRIS P4 TSL 1 (best) BASIC18.36■□□□□ 0.53
PCCBP05166 NTMT1-203ENST00000372483 1315 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
PCCBP05166 CNTNAP3B-203ENST00000377561 5379 ntAPPRIS P2 TSL 1 (best) BASIC18.36■□□□□ 0.53
PCCBP05166 INSL3-202ENST00000379695 899 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
PCCBP05166 KCNIP4-205ENST00000382152 1767 ntTSL 5 BASIC18.36■□□□□ 0.53
PCCBP05166 LAT-204ENST00000395461 1448 ntAPPRIS ALT2 TSL 1 (best) BASIC18.36■□□□□ 0.53
PCCBP05166 ZFAND2A-203ENST00000401903 968 ntTSL 3 BASIC18.36■□□□□ 0.53
PCCBP05166 RBFOX1-204ENST00000422070 1684 ntTSL 2 BASIC18.36■□□□□ 0.53
PCCBP05166 AC022424.1-201ENST00000512155 889 ntTSL 3 BASIC18.36■□□□□ 0.53
PCCBP05166 FAM53C-211ENST00000513056 923 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
PCCBP05166 MMAB-204ENST00000537236 1342 ntTSL 3 BASIC18.36■□□□□ 0.53
PCCBP05166 SRRM2-AS1-203ENST00000571305 1344 ntTSL 2 BASIC18.36■□□□□ 0.53
PCCBP05166 MRPS7-204ENST00000579761 1717 ntTSL 2 BASIC18.36■□□□□ 0.53
PCCBP05166 AC020558.2-201ENST00000582325 795 ntTSL 3 BASIC18.36■□□□□ 0.53
PCCBP05166 METTL23-204ENST00000586752 904 ntTSL 2 BASIC18.36■□□□□ 0.53
PCCBP05166 AC034238.1-212ENST00000596137 723 ntTSL 5 BASIC18.36■□□□□ 0.53
PCCBP05166 CDH23-212ENST00000616684 4814 ntTSL 5 BASIC18.36■□□□□ 0.53
PCCBP05166 SPEG-225ENST00000617028 815 ntTSL 5 BASIC18.36■□□□□ 0.53
PCCBP05166 TEPSIN-213ENST00000637944 1782 ntAPPRIS ALT2 TSL 5 BASIC18.36■□□□□ 0.53
PCCBP05166 DLK1-202ENST00000341267 4722 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
PCCBP05166 NECTIN3-206ENST00000485303 3664 ntAPPRIS P3 TSL 1 (best) BASIC18.36■□□□□ 0.53
PCCBP05166 SHANK1-202ENST00000359082 6459 ntTSL 5 BASIC18.36■□□□□ 0.53
PCCBP05166 TRIM58-201ENST00000366481 3225 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
PCCBP05166 MXD3-202ENST00000427908 2269 ntTSL 2 BASIC18.35■□□□□ 0.53
PCCBP05166 GLYCTK-202ENST00000436784 1982 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
PCCBP05166 SLC26A11-212ENST00000572725 1862 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
PCCBP05166 PRKCSH-209ENST00000589838 1898 ntAPPRIS P3 TSL 1 (best) BASIC18.35■□□□□ 0.53
PCCBP05166 CLN3-206ENST00000360019 1840 ntTSL 2 BASIC18.35■□□□□ 0.53
PCCBP05166 WDR34-201ENST00000372715 1755 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
PCCBP05166 ABHD13-201ENST00000375898 5338 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
PCCBP05166 FKBP3-201ENST00000216330 1684 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
PCCBP05166 THNSL2-205ENST00000449349 1616 ntTSL 5 BASIC18.35■□□□□ 0.53
PCCBP05166 WDR18-202ENST00000585809 1608 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
PCCBP05166 BTG3-201ENST00000339775 1485 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
PCCBP05166 ZNF554-201ENST00000317243 2736 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
PCCBP05166 UXT-201ENST00000333119 574 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
PCCBP05166 HLA-F-217ENST00000334668 1283 ntAPPRIS ALT2 BASIC18.35■□□□□ 0.53
PCCBP05166 HLA-F-220ENST00000434407 884 ntBASIC18.35■□□□□ 0.53
PCCBP05166 CBR1-203ENST00000439427 1024 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
PCCBP05166 KLHL21-204ENST00000467612 1056 ntTSL 3 BASIC18.35■□□□□ 0.53
PCCBP05166 MYD88-211ENST00000495303 976 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
PCCBP05166 AC069148.1-201ENST00000608741 768 ntBASIC18.35■□□□□ 0.53
PCCBP05166 NHLH2-201ENST00000320238 2512 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
PCCBP05166 KCNH2-202ENST00000330883 3267 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
PCCBP05166 CRMP1-201ENST00000324989 3146 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
PCCBP05166 HIC1-201ENST00000322941 3053 ntAPPRIS P1 TSL 5 BASIC18.35■□□□□ 0.53
PCCBP05166 SORBS3-221ENST00000523965 2028 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
PCCBP05166 CCDC63-202ENST00000545036 1887 ntAPPRIS ALT2 TSL 2 BASIC18.35■□□□□ 0.53
PCCBP05166 LINC01356-201ENST00000401018 1819 ntTSL 2 BASIC18.35■□□□□ 0.53
PCCBP05166 MAPK8IP3-202ENST00000356010 4456 ntTSL 5 BASIC18.35■□□□□ 0.53
PCCBP05166 WRB-201ENST00000333781 1616 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
PCCBP05166 PTN-201ENST00000348225 1614 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
PCCBP05166 CENPT-215ENST00000564817 1638 ntAPPRIS ALT2 TSL 5 BASIC18.34■□□□□ 0.53
PCCBP05166 EFHD2-201ENST00000375980 2419 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
PCCBP05166 LPCAT3-201ENST00000261407 2268 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
PCCBP05166 TCF7-201ENST00000342854 3045 ntAPPRIS P2 TSL 1 (best) BASIC18.34■□□□□ 0.53
PCCBP05166 PBK-203ENST00000522944 1499 ntTSL 2 BASIC18.34■□□□□ 0.53
PCCBP05166 ZFC3H1-211ENST00000552037 1484 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
PCCBP05166 KCTD18-201ENST00000359878 2940 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
PCCBP05166 TWIST2-202ENST00000612363 1404 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
PCCBP05166 SCAND1-203ENST00000615116 1371 ntAPPRIS P1 TSL 5 BASIC18.34■□□□□ 0.53
PCCBP05166 DMWD-201ENST00000270223 3305 ntAPPRIS P2 TSL 1 (best) BASIC18.34■□□□□ 0.53
PCCBP05166 HSD17B10-201ENST00000168216 960 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
PCCBP05166 BEX1-201ENST00000372728 864 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
PCCBP05166 PDLIM7-205ENST00000393551 1226 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
PCCBP05166 HOXB-AS3-203ENST00000465846 434 ntTSL 3 BASIC18.34■□□□□ 0.53
PCCBP05166 ANKRD34C-AS1-201ENST00000557790 594 ntTSL 3 BASIC18.34■□□□□ 0.53
PCCBP05166 METRN-205ENST00000568415 612 ntAPPRIS ALT2 TSL 3 BASIC18.34■□□□□ 0.53
PCCBP05166 AC138207.7-201ENST00000584499 668 ntTSL 5 BASIC18.34■□□□□ 0.53
PCCBP05166 PAFAH1B2-202ENST00000419197 2517 ntTSL 2 BASIC18.34■□□□□ 0.53
PCCBP05166 SLC27A3-214ENST00000624995 2413 ntAPPRIS P2 TSL 1 (best) BASIC18.34■□□□□ 0.53
PCCBP05166 LRRC4B-202ENST00000599957 3019 ntAPPRIS P1 TSL 3 BASIC18.34■□□□□ 0.53
PCCBP05166 TYMS-203ENST00000323274 1662 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
PCCBP05166 MEF2B-201ENST00000409224 1683 ntTSL 2 BASIC18.34■□□□□ 0.53
PCCBP05166 AC009041.2-204ENST00000568394 3343 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
PCCBP05166 PITX2-203ENST00000355080 2100 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
PCCBP05166 ZC3H12D-201ENST00000409806 5791 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
PCCBP05166 ZAR1L-202ENST00000533490 1564 ntAPPRIS P1 TSL 5 BASIC18.34■□□□□ 0.53
PCCBP05166 SDF4-201ENST00000263741 2079 ntAPPRIS P3 TSL 1 (best) BASIC18.34■□□□□ 0.53
PCCBP05166 HCN4-201ENST00000261917 7228 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
PCCBP05166 DHRSX-201ENST00000334651 2571 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
PCCBP05166 SNX17-201ENST00000233575 2044 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
PCCBP05166 HMCES-201ENST00000383463 2515 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
Retrieved 100 of 98,524 protein–RNA pairs in 23.8 ms