Protein–RNA interactions for Protein: O75487

GPC4, Glypican-4, humanhuman

Predictions only

Length 556 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GPC4O75487 SLC25A29-215ENST00000556505 1540 ntTSL 2 BASIC18.62■□□□□ 0.57
GPC4O75487 ZBTB8A-201ENST00000316459 1943 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
GPC4O75487 NUDT10-202ENST00000376006 2001 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
GPC4O75487 MCCC1-214ENST00000610757 2410 ntTSL 5 BASIC18.62■□□□□ 0.57
GPC4O75487 AL390961.4-201ENST00000623958 2535 ntBASIC18.62■□□□□ 0.57
GPC4O75487 SEC14L2-215ENST00000617837 2632 ntTSL 2 BASIC18.62■□□□□ 0.57
GPC4O75487 URI1-202ENST00000392271 3444 ntAPPRIS P3 TSL 1 (best) BASIC18.62■□□□□ 0.57
GPC4O75487 BMP2K-208ENST00000628286 3848 ntAPPRIS ALT2 TSL 5 BASIC18.62■□□□□ 0.57
GPC4O75487 SLC8A3-202ENST00000356921 5250 ntAPPRIS P3 TSL 1 (best) BASIC18.62■□□□□ 0.57
GPC4O75487 ASXL1-212ENST00000620121 5374 ntAPPRIS ALT2 TSL 5 BASIC18.62■□□□□ 0.57
GPC4O75487 ITGA7-201ENST00000257879 4120 ntAPPRIS P3 TSL 1 (best) BASIC18.61■□□□□ 0.57
GPC4O75487 FAM222A-202ENST00000538780 3294 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
GPC4O75487 SLCO4A1-201ENST00000217159 2776 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
GPC4O75487 NPTX2-201ENST00000265634 2700 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
GPC4O75487 MEPCE-202ENST00000414441 2261 ntTSL 2 BASIC18.61■□□□□ 0.57
GPC4O75487 PSMD3-201ENST00000264639 2158 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
GPC4O75487 NUP50-AS1-201ENST00000426282 2076 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
GPC4O75487 FUCA1-201ENST00000374479 2047 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
GPC4O75487 NUMBL-202ENST00000540131 1931 ntAPPRIS ALT2 TSL 2 BASIC18.61■□□□□ 0.57
GPC4O75487 IDH3G-202ENST00000370092 1712 ntTSL 5 BASIC18.61■□□□□ 0.57
GPC4O75487 AC093525.10-201ENST00000625130 1569 ntBASIC18.61■□□□□ 0.57
GPC4O75487 CCDC106-201ENST00000308964 1546 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
GPC4O75487 FCMR-202ENST00000442471 1441 ntTSL 2 BASIC18.61■□□□□ 0.57
GPC4O75487 AL445686.2-201ENST00000577528 1445 ntTSL 3 BASIC18.61■□□□□ 0.57
GPC4O75487 HBA1-201ENST00000320868 577 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
GPC4O75487 GPM6B-204ENST00000398361 1033 ntTSL 2 BASIC18.61■□□□□ 0.57
GPC4O75487 AL162231.1-203ENST00000416454 465 ntAPPRIS ALT2 TSL 2 BASIC18.61■□□□□ 0.57
GPC4O75487 TSTD3-202ENST00000636394 336 ntAPPRIS ALT2 TSL 3 BASIC18.61■□□□□ 0.57
GPC4O75487 KIFC3-201ENST00000379655 3427 ntAPPRIS P3 TSL 1 (best) BASIC18.61■□□□□ 0.57
GPC4O75487 CCNJL-203ENST00000393977 3320 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
GPC4O75487 LONRF1-208ENST00000533751 3043 ntTSL 5 BASIC18.61■□□□□ 0.57
GPC4O75487 PTPRF-209ENST00000438120 6377 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
GPC4O75487 PDLIM4-201ENST00000253754 2282 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
GPC4O75487 CD177-203ENST00000618265 2222 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
GPC4O75487 TCTN1-223ENST00000550703 2149 ntTSL 2 BASIC18.61■□□□□ 0.57
GPC4O75487 NFKBIZ-201ENST00000326151 2058 ntTSL 2 BASIC18.61■□□□□ 0.57
GPC4O75487 FBF1-205ENST00000586717 4825 ntAPPRIS ALT2 TSL 5 BASIC18.61■□□□□ 0.57
GPC4O75487 DHX33-201ENST00000225296 5618 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
GPC4O75487 UTP18-201ENST00000225298 1894 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
GPC4O75487 ATP6V1D-201ENST00000216442 1845 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
GPC4O75487 QPCTL-202ENST00000366382 1814 ntTSL 2 BASIC18.6■□□□□ 0.57
GPC4O75487 CERS4-201ENST00000251363 1797 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
GPC4O75487 CLEC10A-201ENST00000254868 1797 ntAPPRIS P3 TSL 1 (best) BASIC18.6■□□□□ 0.57
GPC4O75487 TMEM74-201ENST00000297459 1741 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
GPC4O75487 APCDD1-201ENST00000355285 3809 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
GPC4O75487 CNOT9-209ENST00000627282 1621 ntTSL 2 BASIC18.6■□□□□ 0.57
GPC4O75487 ZNF746-202ENST00000458143 3797 ntAPPRIS ALT2 TSL 2 BASIC18.6■□□□□ 0.57
GPC4O75487 ANKS3-201ENST00000304283 2662 ntAPPRIS P1 TSL 2 BASIC18.6■□□□□ 0.57
GPC4O75487 ZHX3-212ENST00000558993 1528 ntTSL 5 BASIC18.6■□□□□ 0.57
GPC4O75487 RABEP1-202ENST00000537505 5365 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
GPC4O75487 CABIN1-202ENST00000337989 2422 ntAPPRIS ALT2 TSL 1 (best) BASIC18.6■□□□□ 0.57
GPC4O75487 CRYBB2P1-202ENST00000382734 1364 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
GPC4O75487 AC135050.7-201ENST00000624508 2218 ntBASIC18.6■□□□□ 0.57
GPC4O75487 PODXL2-201ENST00000342480 2186 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
GPC4O75487 EMC6-201ENST00000248378 653 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
GPC4O75487 ID1-202ENST00000376112 994 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
GPC4O75487 AC026412.1-201ENST00000507290 1033 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
GPC4O75487 C12orf76-208ENST00000551185 496 ntTSL 2 BASIC18.6■□□□□ 0.57
GPC4O75487 FOXN3-AS1-201ENST00000555562 1077 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
GPC4O75487 FITM1-202ENST00000559294 800 ntBASIC18.6■□□□□ 0.57
GPC4O75487 AP000525.1-201ENST00000608286 694 ntBASIC18.6■□□□□ 0.57
GPC4O75487 GTPBP2-202ENST00000307126 2933 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
GPC4O75487 MYO1B-204ENST00000392318 5082 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
GPC4O75487 IL4I1-202ENST00000391826 1863 ntAPPRIS ALT2 TSL 1 (best) BASIC18.6■□□□□ 0.57
GPC4O75487 ABCC5-204ENST00000392579 1848 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
GPC4O75487 CAPS-201ENST00000452990 1789 ntTSL 5 BASIC18.6■□□□□ 0.57
GPC4O75487 AC018470.1-201ENST00000624790 3129 ntBASIC18.6■□□□□ 0.57
GPC4O75487 WNT6-201ENST00000233948 1703 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
GPC4O75487 MYBL2-202ENST00000396863 2704 ntTSL 2 BASIC18.59■□□□□ 0.57
GPC4O75487 NEUROD2-201ENST00000302584 2041 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
GPC4O75487 KRT8P3-201ENST00000519669 1449 ntBASIC18.59■□□□□ 0.57
GPC4O75487 TSGA10IP-203ENST00000532620 1925 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
GPC4O75487 JAKMIP1-208ENST00000637373 1362 ntTSL 5 BASIC18.59■□□□□ 0.57
GPC4O75487 SLC37A2-203ENST00000403796 2910 ntAPPRIS ALT1 TSL 2 BASIC18.59■□□□□ 0.57
GPC4O75487 CHD1L-204ENST00000431239 2907 ntTSL 5 BASIC18.59■□□□□ 0.57
GPC4O75487 STMN3-202ENST00000540534 2351 ntTSL 2 BASIC18.59■□□□□ 0.57
GPC4O75487 TBC1D20-201ENST00000354200 4466 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
GPC4O75487 NOMO3-201ENST00000263012 3911 ntAPPRIS ALT2 TSL 1 (best) BASIC18.59■□□□□ 0.57
GPC4O75487 SSNA1-201ENST00000322310 896 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
GPC4O75487 PRR31-201ENST00000371629 978 ntTSL 2 BASIC18.59■□□□□ 0.57
GPC4O75487 TRPT1-203ENST00000394547 865 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
GPC4O75487 POLR2D-202ENST00000409698 806 ntTSL 2 BASIC18.59■□□□□ 0.57
GPC4O75487 CRYGFP-201ENST00000418459 633 ntBASIC18.59■□□□□ 0.57
GPC4O75487 GCFC2-207ENST00000470503 1066 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
GPC4O75487 SIVA1-207ENST00000556195 674 ntTSL 3 BASIC18.59■□□□□ 0.57
GPC4O75487 TYROBP-209ENST00000589517 415 ntAPPRIS ALT1 TSL 1 (best) BASIC18.59■□□□□ 0.57
GPC4O75487 CROCCP2-205ENST00000639481 1296 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
GPC4O75487 RELA-202ENST00000406246 2700 ntAPPRIS P3 TSL 1 (best) BASIC18.59■□□□□ 0.57
GPC4O75487 CCDC17-209ENST00000528266 2181 ntAPPRIS P3 TSL 2 BASIC18.59■□□□□ 0.57
GPC4O75487 BAG3-201ENST00000369085 2571 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
GPC4O75487 CAMK4-210ENST00000512453 1640 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
GPC4O75487 MB21D2-201ENST00000392452 3368 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
GPC4O75487 KLF3-201ENST00000261438 5122 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
GPC4O75487 TMPRSS5-209ENST00000544634 1524 ntTSL 2 BASIC18.59■□□□□ 0.57
GPC4O75487 ZNF205-206ENST00000620094 2309 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.57
GPC4O75487 CRYZL1-203ENST00000381540 1482 ntTSL 2 BASIC18.58■□□□□ 0.57
GPC4O75487 ETV2-203ENST00000402764 1487 ntAPPRIS P3 TSL 1 (best) BASIC18.58■□□□□ 0.57
GPC4O75487 SEMA6B-201ENST00000586582 3986 ntAPPRIS P2 TSL 1 (best) BASIC18.58■□□□□ 0.57
GPC4O75487 PFN2-203ENST00000452853 1780 ntAPPRIS ALT1 TSL 1 (best) BASIC18.58■□□□□ 0.57
GPC4O75487 PLCB3-204ENST00000540288 4469 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.57
Retrieved 100 of 98,524 protein–RNA pairs in 31.8 ms