Protein–RNA interactions for Protein: O60939

SCN2B, Sodium channel subunit beta-2, humanhuman

Predictions only

Length 215 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SCN2BO60939 RNF169-201ENST00000299563 7823 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
SCN2BO60939 ENTPD6-209ENST00000433259 2654 ntTSL 5 BASIC17.62■□□□□ 0.41
SCN2BO60939 IDUA-210ENST00000514224 2130 ntTSL 2 BASIC17.62■□□□□ 0.41
SCN2BO60939 INTS11-249ENST00000618806 1523 ntTSL 2 BASIC17.62■□□□□ 0.41
SCN2BO60939 RAB4A-205ENST00000618010 2799 ntTSL 3 BASIC17.62■□□□□ 0.41
SCN2BO60939 PARP15-202ENST00000464300 2156 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
SCN2BO60939 AL590648.2-201ENST00000427949 2225 ntTSL 2 BASIC17.62■□□□□ 0.41
SCN2BO60939 ZNF419-201ENST00000221735 2309 ntAPPRIS ALT2 TSL 1 (best) BASIC17.61■□□□□ 0.41
SCN2BO60939 SHC3-202ENST00000375835 9768 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
SCN2BO60939 P2RY6-208ENST00000540124 2351 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
SCN2BO60939 NOV-201ENST00000259526 2522 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
SCN2BO60939 BICRA-201ENST00000396720 5739 ntAPPRIS P2 TSL 5 BASIC17.61■□□□□ 0.41
SCN2BO60939 STXBP2-203ENST00000441779 1914 ntTSL 2 BASIC17.61■□□□□ 0.41
SCN2BO60939 ITGB5-201ENST00000296181 4372 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
SCN2BO60939 EFHC1-206ENST00000635760 2030 ntTSL 5 BASIC17.61■□□□□ 0.41
SCN2BO60939 C1QBP-201ENST00000225698 1169 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
SCN2BO60939 MCAT-202ENST00000327555 1134 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
SCN2BO60939 HP1BP3-202ENST00000375000 928 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
SCN2BO60939 LINC00595-207ENST00000476909 792 ntTSL 2 BASIC17.61■□□□□ 0.41
SCN2BO60939 PSMB5-205ENST00000493471 1117 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
SCN2BO60939 UBE2K-204ENST00000503368 891 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
SCN2BO60939 DENND3-207ENST00000518347 850 ntTSL 2 BASIC17.61■□□□□ 0.41
SCN2BO60939 AP002433.1-201ENST00000525548 964 ntTSL 3 BASIC17.61■□□□□ 0.41
SCN2BO60939 KDM2B-217ENST00000543852 1188 ntTSL 5 BASIC17.61■□□□□ 0.41
SCN2BO60939 AC004771.5-201ENST00000575985 542 ntTSL 4 BASIC17.61■□□□□ 0.41
SCN2BO60939 TCP11-228ENST00000611141 2130 ntAPPRIS ALT2 TSL 1 (best) BASIC17.61■□□□□ 0.41
SCN2BO60939 TSTD3-202ENST00000636394 336 ntAPPRIS ALT2 TSL 3 BASIC17.61■□□□□ 0.41
SCN2BO60939 ATP10A-201ENST00000356865 6680 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
SCN2BO60939 TRPV4-208ENST00000544971 2295 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
SCN2BO60939 ZNF385B-204ENST00000410066 3288 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
SCN2BO60939 ATP2A2-201ENST00000308664 4453 ntAPPRIS ALT1 TSL 1 (best) BASIC17.61■□□□□ 0.41
SCN2BO60939 KRT5-201ENST00000252242 2531 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
SCN2BO60939 TICAM1-202ENST00000621756 1650 ntTSL 5 BASIC17.61■□□□□ 0.41
SCN2BO60939 PCBP4-210ENST00000471622 1784 ntTSL 5 BASIC17.61■□□□□ 0.41
SCN2BO60939 SEC61A2-201ENST00000298428 1893 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
SCN2BO60939 AC093677.2-201ENST00000600169 1863 ntBASIC17.61■□□□□ 0.41
SCN2BO60939 GTF2IRD2-207ENST00000625377 1910 ntTSL 5 BASIC17.6■□□□□ 0.41
SCN2BO60939 AGFG1-201ENST00000310078 8668 ntAPPRIS P3 TSL 1 (best) BASIC17.6■□□□□ 0.41
SCN2BO60939 GATAD1-201ENST00000287957 3361 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
SCN2BO60939 SLC6A17-201ENST00000331565 6427 ntAPPRIS P1 TSL 2 BASIC17.6■□□□□ 0.41
SCN2BO60939 SNX11-201ENST00000359238 2315 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
SCN2BO60939 CHPF-202ENST00000373891 1079 ntTSL 2 BASIC17.6■□□□□ 0.41
SCN2BO60939 ANKRD54-204ENST00000411961 946 ntTSL 5 BASIC17.6■□□□□ 0.41
SCN2BO60939 CCK-203ENST00000434608 747 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
SCN2BO60939 SMG1P1-207ENST00000446662 852 ntTSL 5 BASIC17.6■□□□□ 0.41
SCN2BO60939 MAGI2-AS3-211ENST00000451809 707 ntTSL 3 BASIC17.6■□□□□ 0.41
SCN2BO60939 ASRGL1-211ENST00000628829 1161 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
SCN2BO60939 SRI-203ENST00000419179 1307 ntTSL 2 BASIC17.6■□□□□ 0.41
SCN2BO60939 PRSS50-202ENST00000315170 1372 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
SCN2BO60939 AC096733.2-201ENST00000609937 1394 ntBASIC17.6■□□□□ 0.41
SCN2BO60939 KHDC1-202ENST00000370384 1430 ntAPPRIS ALT2 TSL 1 (best) BASIC17.6■□□□□ 0.41
SCN2BO60939 ETV2-203ENST00000402764 1487 ntAPPRIS P3 TSL 1 (best) BASIC17.6■□□□□ 0.41
SCN2BO60939 COQ9-210ENST00000567072 1482 ntTSL 3 BASIC17.6■□□□□ 0.41
SCN2BO60939 FSCN1P1-201ENST00000568912 1481 ntBASIC17.6■□□□□ 0.41
SCN2BO60939 IMMP2L-202ENST00000405709 1522 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
SCN2BO60939 MINOS1-NBL1-204ENST00000602662 1623 ntAPPRIS P1 TSL 2 BASIC17.6■□□□□ 0.41
SCN2BO60939 CDK4-202ENST00000312990 1650 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
SCN2BO60939 AC087500.1-202ENST00000571689 1715 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
SCN2BO60939 PDIA5-201ENST00000316218 1799 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
SCN2BO60939 KRCC1-201ENST00000347055 1753 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
SCN2BO60939 AC063977.6-201ENST00000600074 1763 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
SCN2BO60939 AC127496.1-202ENST00000573602 2091 ntTSL 2 BASIC17.6■□□□□ 0.41
SCN2BO60939 SCOC-208ENST00000510586 2193 ntAPPRIS ALT1 TSL 5 BASIC17.6■□□□□ 0.41
SCN2BO60939 ASXL1-202ENST00000375687 7031 ntAPPRIS P2 TSL 5 BASIC17.6■□□□□ 0.41
SCN2BO60939 BEGAIN-211ENST00000637646 2911 ntTSL 5 BASIC17.6■□□□□ 0.41
SCN2BO60939 NFKB2-201ENST00000189444 3011 ntAPPRIS ALT1 TSL 1 (best) BASIC17.6■□□□□ 0.41
SCN2BO60939 NECTIN3-206ENST00000485303 3664 ntAPPRIS P3 TSL 1 (best) BASIC17.59■□□□□ 0.41
SCN2BO60939 POC1B-GALNT4-201ENST00000547474 2207 ntTSL 2 BASIC17.59■□□□□ 0.41
SCN2BO60939 SLC39A5-201ENST00000266980 2031 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
SCN2BO60939 NPEPL1-204ENST00000525967 1917 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
SCN2BO60939 RTN4-207ENST00000402434 1456 ntTSL 5 BASIC17.59■□□□□ 0.41
SCN2BO60939 TEX13A-202ENST00000609007 1349 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
SCN2BO60939 PHOSPHO2-201ENST00000359744 1125 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
SCN2BO60939 LINC01122-201ENST00000422723 675 ntTSL 3 BASIC17.59■□□□□ 0.41
SCN2BO60939 TMEM240-202ENST00000425828 717 ntAPPRIS P1 TSL 2 BASIC17.59■□□□□ 0.41
SCN2BO60939 AC073050.1-201ENST00000442316 462 ntTSL 3 BASIC17.59■□□□□ 0.41
SCN2BO60939 AC004706.3-201ENST00000634558 1009 ntTSL 5 BASIC17.59■□□□□ 0.41
SCN2BO60939 BAZ1B-201ENST00000339594 6102 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
SCN2BO60939 CD276-203ENST00000537340 2439 ntTSL 2 BASIC17.59■□□□□ 0.41
SCN2BO60939 LRRC27-201ENST00000344079 1809 ntAPPRIS ALT2 TSL 2 BASIC17.58■□□□□ 0.41
SCN2BO60939 MSI2-203ENST00000416426 1714 ntTSL 2 BASIC17.58■□□□□ 0.41
SCN2BO60939 OSMR-202ENST00000502536 1740 ntTSL 1 (best) BASIC17.58■□□□□ 0.41
SCN2BO60939 TMC6-203ENST00000392467 2833 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.41
SCN2BO60939 RUBCN-206ENST00000449205 1603 ntTSL 1 (best) BASIC17.58■□□□□ 0.41
SCN2BO60939 IGSF9-206ENST00000611023 2663 ntTSL 1 (best) BASIC17.58■□□□□ 0.41
SCN2BO60939 MYLKP1-201ENST00000509077 1580 ntBASIC17.58■□□□□ 0.41
SCN2BO60939 MAN2A1-201ENST00000261483 4667 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.41
SCN2BO60939 STEAP1B-201ENST00000404369 1515 ntAPPRIS ALT2 TSL 1 (best) BASIC17.58■□□□□ 0.41
SCN2BO60939 CCDC157-201ENST00000338306 3001 ntAPPRIS P3 TSL 5 BASIC17.58■□□□□ 0.4
SCN2BO60939 BOLA1-203ENST00000369153 1096 ntAPPRIS P1 TSL 3 BASIC17.58■□□□□ 0.4
SCN2BO60939 FAM197Y1-201ENST00000421178 764 ntBASIC17.58■□□□□ 0.4
SCN2BO60939 FAM131A-208ENST00000453072 1038 ntTSL 2 BASIC17.58■□□□□ 0.4
SCN2BO60939 SFXN1-203ENST00000502393 637 ntTSL 2 BASIC17.58■□□□□ 0.4
SCN2BO60939 ADAMTS19-AS1-201ENST00000502827 786 ntTSL 4 BASIC17.58■□□□□ 0.4
SCN2BO60939 AL691442.1-201ENST00000505139 1042 ntAPPRIS P1 TSL 2 BASIC17.58■□□□□ 0.4
SCN2BO60939 AC116562.2-201ENST00000507042 360 ntBASIC17.58■□□□□ 0.4
SCN2BO60939 ITM2C-210ENST00000620962 501 ntBASIC17.58■□□□□ 0.4
SCN2BO60939 AC008764.6-201ENST00000595909 2069 ntBASIC17.58■□□□□ 0.4
SCN2BO60939 CERCAM-202ENST00000372842 5201 ntAPPRIS ALT2 TSL 5 BASIC17.58■□□□□ 0.4
SCN2BO60939 FZR1-203ENST00000441788 5212 ntAPPRIS P3 TSL 1 (best) BASIC17.58■□□□□ 0.4
Retrieved 100 of 98,524 protein–RNA pairs in 31.2 ms