Protein–RNA interactions for Protein: O43734

TRAF3IP2, Adapter protein CIKS, humanhuman

Predicted RBP Predictions only

Length 574 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF3IP2O43734 SERPINH1-215ENST00000533603 2299 ntAPPRIS P1 TSL 2 BASIC16.53■□□□□ 0.24
TRAF3IP2O43734 MAFG-202ENST00000392366 1743 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
TRAF3IP2O43734 KBTBD11-201ENST00000320248 6710 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
TRAF3IP2O43734 CDH23-212ENST00000616684 4814 ntTSL 5 BASIC16.53■□□□□ 0.24
TRAF3IP2O43734 ZCCHC17-205ENST00000615916 1652 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
TRAF3IP2O43734 RAX2-201ENST00000555633 2414 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
TRAF3IP2O43734 UBE3C-201ENST00000348165 5229 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
TRAF3IP2O43734 PDE6B-202ENST00000429163 2120 ntTSL 2 BASIC16.52■□□□□ 0.24
TRAF3IP2O43734 SIGIRR-220ENST00000531205 1649 ntTSL 2 BASIC16.52■□□□□ 0.24
TRAF3IP2O43734 RNF169-201ENST00000299563 7823 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
TRAF3IP2O43734 UBN1-201ENST00000262376 6252 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
TRAF3IP2O43734 SALRNA1-201ENST00000555871 2086 ntTSL 4 BASIC16.52■□□□□ 0.24
TRAF3IP2O43734 LARGE2-202ENST00000401752 2516 ntAPPRIS P3 TSL 1 (best) BASIC16.52■□□□□ 0.24
TRAF3IP2O43734 NPR3-204ENST00000434067 2715 ntTSL 5 BASIC16.52■□□□□ 0.24
TRAF3IP2O43734 MUTYH-202ENST00000355498 1776 ntAPPRIS ALT2 TSL 1 (best) BASIC16.52■□□□□ 0.24
TRAF3IP2O43734 NUDT4-202ENST00000415493 4839 ntAPPRIS ALT1 TSL 1 (best) BASIC16.52■□□□□ 0.24
TRAF3IP2O43734 LONP1-215ENST00000593119 2918 ntTSL 2 BASIC16.52■□□□□ 0.24
TRAF3IP2O43734 LRRC23-202ENST00000323702 1208 ntAPPRIS ALT2 TSL 1 (best) BASIC16.52■□□□□ 0.24
TRAF3IP2O43734 UXT-201ENST00000333119 574 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
TRAF3IP2O43734 CCK-201ENST00000334681 830 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
TRAF3IP2O43734 NME1-202ENST00000336097 986 ntTSL 1 (best) BASIC16.52■□□□□ 0.24
TRAF3IP2O43734 NME1-203ENST00000393196 940 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
TRAF3IP2O43734 MNX1-AS1-201ENST00000480284 1041 ntTSL 1 (best) BASIC16.52■□□□□ 0.24
TRAF3IP2O43734 DUT-205ENST00000558813 769 ntTSL 2 BASIC16.52■□□□□ 0.24
TRAF3IP2O43734 TMEM249-203ENST00000565365 975 ntAPPRIS P2 TSL 3 BASIC16.52■□□□□ 0.24
TRAF3IP2O43734 GRB10-205ENST00000401949 2627 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.23
TRAF3IP2O43734 ENDOV-225ENST00000522751 1475 ntTSL 5 BASIC16.52■□□□□ 0.23
TRAF3IP2O43734 PRRT1-201ENST00000211413 1909 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.23
TRAF3IP2O43734 RREB1-201ENST00000334984 5789 ntAPPRIS ALT2 TSL 1 (best) BASIC16.52■□□□□ 0.23
TRAF3IP2O43734 SLC2A11-204ENST00000398356 2388 ntTSL 1 (best) BASIC16.52■□□□□ 0.23
TRAF3IP2O43734 SEPT11-201ENST00000264893 5593 ntAPPRIS P2 TSL 1 (best) BASIC16.52■□□□□ 0.23
TRAF3IP2O43734 PTTG1IP-204ENST00000445724 2497 ntTSL 2 BASIC16.52■□□□□ 0.23
TRAF3IP2O43734 GAS2L1-210ENST00000621062 2483 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.23
TRAF3IP2O43734 C6orf118-201ENST00000230301 1812 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.23
TRAF3IP2O43734 TRIM41-202ENST00000351937 2696 ntTSL 1 (best) BASIC16.52■□□□□ 0.23
TRAF3IP2O43734 KBTBD2-201ENST00000304056 3745 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.23
TRAF3IP2O43734 CACNA1A-215ENST00000635727 7536 ntAPPRIS ALT2 TSL 5 BASIC16.51■□□□□ 0.23
TRAF3IP2O43734 FCER2-201ENST00000346664 1596 ntAPPRIS P2 TSL 1 (best) BASIC16.51■□□□□ 0.23
TRAF3IP2O43734 FCER2-205ENST00000597921 1560 ntAPPRIS P2 TSL 1 (best) BASIC16.51■□□□□ 0.23
TRAF3IP2O43734 DOC2A-208ENST00000564944 1782 ntAPPRIS P1 TSL 5 BASIC16.51■□□□□ 0.23
TRAF3IP2O43734 TMTC1-203ENST00000539277 2758 ntAPPRIS P2 TSL 1 (best) BASIC16.51■□□□□ 0.23
TRAF3IP2O43734 PCED1A-201ENST00000356872 1706 ntTSL 2 BASIC16.51■□□□□ 0.23
TRAF3IP2O43734 FAM110A-203ENST00000381939 1737 ntAPPRIS P1 TSL 3 BASIC16.51■□□□□ 0.23
TRAF3IP2O43734 NDN-201ENST00000331837 1931 ntAPPRIS P1 BASIC16.51■□□□□ 0.23
TRAF3IP2O43734 CPEB2-207ENST00000507071 2103 ntAPPRIS ALT2 TSL 1 (best) BASIC16.51■□□□□ 0.23
TRAF3IP2O43734 CADPS2-201ENST00000313070 6065 ntTSL 5 BASIC16.51■□□□□ 0.23
TRAF3IP2O43734 CHRAC1-201ENST00000220913 2488 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
TRAF3IP2O43734 FAM182B-201ENST00000376403 1681 ntAPPRIS P5 TSL 1 (best) BASIC16.51■□□□□ 0.23
TRAF3IP2O43734 MPG-201ENST00000219431 1193 ntAPPRIS P4 TSL 3 BASIC16.51■□□□□ 0.23
TRAF3IP2O43734 CFL1-201ENST00000308162 1234 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
TRAF3IP2O43734 INSIG1-202ENST00000342407 1127 ntTSL 2 BASIC16.51■□□□□ 0.23
TRAF3IP2O43734 S100A16-203ENST00000368705 956 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
TRAF3IP2O43734 LTB-210ENST00000429299 897 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
TRAF3IP2O43734 KRT18P23-201ENST00000435622 1283 ntBASIC16.51■□□□□ 0.23
TRAF3IP2O43734 AC002467.1-201ENST00000457510 657 ntTSL 3 BASIC16.51■□□□□ 0.23
TRAF3IP2O43734 CCNJL-205ENST00000519673 940 ntTSL 2 BASIC16.51■□□□□ 0.23
TRAF3IP2O43734 SLC39A11-207ENST00000579732 1004 ntTSL 2 BASIC16.51■□□□□ 0.23
TRAF3IP2O43734 AC012306.2-201ENST00000609350 630 ntBASIC16.51■□□□□ 0.23
TRAF3IP2O43734 AC008735.6-201ENST00000635964 1292 ntAPPRIS P1 TSL 2 BASIC16.51■□□□□ 0.23
TRAF3IP2O43734 HOXC11-201ENST00000243082 2039 ntTSL 3 BASIC16.51■□□□□ 0.23
TRAF3IP2O43734 UBE2I-203ENST00000397514 2976 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
TRAF3IP2O43734 TXNRD3-203ENST00000524230 2950 ntAPPRIS ALT2 TSL 1 (best) BASIC16.51■□□□□ 0.23
TRAF3IP2O43734 ZNF74-203ENST00000403682 2789 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
TRAF3IP2O43734 MLX-201ENST00000246912 2586 ntAPPRIS P3 TSL 1 (best) BASIC16.51■□□□□ 0.23
TRAF3IP2O43734 KRT8P7-201ENST00000533003 1432 ntBASIC16.51■□□□□ 0.23
TRAF3IP2O43734 THOC3-212ENST00000628318 1442 ntTSL 5 BASIC16.51■□□□□ 0.23
TRAF3IP2O43734 CLN8-211ENST00000636934 1790 ntTSL 5 BASIC16.51■□□□□ 0.23
TRAF3IP2O43734 FAM90A1-201ENST00000307435 2342 ntAPPRIS P1 TSL 2 BASIC16.51■□□□□ 0.23
TRAF3IP2O43734 TYRO3-201ENST00000263798 8207 ntAPPRIS P3 TSL 1 (best) BASIC16.51■□□□□ 0.23
TRAF3IP2O43734 UBP1-202ENST00000283629 4148 ntAPPRIS P3 TSL 1 (best) BASIC16.51■□□□□ 0.23
TRAF3IP2O43734 SLC16A13-201ENST00000308027 1748 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
TRAF3IP2O43734 CD19-206ENST00000567541 1707 ntAPPRIS ALT2 TSL 1 (best) BASIC16.5■□□□□ 0.23
TRAF3IP2O43734 CHPF-203ENST00000535926 2634 ntTSL 2 BASIC16.5■□□□□ 0.23
TRAF3IP2O43734 CARHSP1-219ENST00000618335 2972 ntAPPRIS P1 TSL 4 BASIC16.5■□□□□ 0.23
TRAF3IP2O43734 STEAP1B-201ENST00000404369 1515 ntAPPRIS ALT2 TSL 1 (best) BASIC16.5■□□□□ 0.23
TRAF3IP2O43734 EGFL7-204ENST00000406555 1529 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
TRAF3IP2O43734 CYP51A1P1-201ENST00000492267 1507 ntBASIC16.5■□□□□ 0.23
TRAF3IP2O43734 AC140125.2-201ENST00000502515 1517 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
TRAF3IP2O43734 GAS7-210ENST00000579158 1528 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
TRAF3IP2O43734 PNKP-224ENST00000631020 1545 ntTSL 5 BASIC16.5■□□□□ 0.23
TRAF3IP2O43734 KCNA3-201ENST00000369769 2569 ntAPPRIS P1 BASIC16.5■□□□□ 0.23
TRAF3IP2O43734 CUTC-202ENST00000370476 1346 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
TRAF3IP2O43734 VLDLR-AS1-205ENST00000599229 1346 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
TRAF3IP2O43734 DMRT3-201ENST00000190165 2183 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
TRAF3IP2O43734 FAM3A-201ENST00000322269 1815 ntTSL 5 BASIC16.5■□□□□ 0.23
TRAF3IP2O43734 TRPM4-213ENST00000599628 1829 ntTSL 2 BASIC16.5■□□□□ 0.23
TRAF3IP2O43734 BTBD1-202ENST00000379403 1467 ntTSL 5 BASIC16.5■□□□□ 0.23
TRAF3IP2O43734 RARRES1-201ENST00000237696 1952 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
TRAF3IP2O43734 SCD5-201ENST00000273908 1995 ntTSL 2 BASIC16.5■□□□□ 0.23
TRAF3IP2O43734 TMEM214-203ENST00000404032 2830 ntTSL 2 BASIC16.5■□□□□ 0.23
TRAF3IP2O43734 DGCR6L-201ENST00000248879 1154 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
TRAF3IP2O43734 TMEM234-201ENST00000309777 1082 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
TRAF3IP2O43734 FAM212A-201ENST00000333323 1040 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
TRAF3IP2O43734 FAHD2CP-202ENST00000443258 893 ntTSL 3 BASIC16.5■□□□□ 0.23
TRAF3IP2O43734 AC009947.2-201ENST00000444014 672 ntBASIC16.5■□□□□ 0.23
TRAF3IP2O43734 REPIN1-210ENST00000482680 1029 ntTSL 2 BASIC16.5■□□□□ 0.23
TRAF3IP2O43734 AL512604.3-201ENST00000569583 964 ntBASIC16.5■□□□□ 0.23
TRAF3IP2O43734 NT5C-210ENST00000582160 860 ntTSL 2 BASIC16.5■□□□□ 0.23
TRAF3IP2O43734 GPX4-207ENST00000589115 812 ntTSL 2 BASIC16.5■□□□□ 0.23
TRAF3IP2O43734 AC022154.1-201ENST00000600303 766 ntTSL 3 BASIC16.5■□□□□ 0.23
Retrieved 100 of 98,524 protein–RNA pairs in 26.8 ms