Protein–RNA interactions for Protein: O43623

SNAI2, Zinc finger protein SNAI2, humanhuman

Predictions only

Length 268 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNAI2O43623 PARS2-201ENST00000371279 2347 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
SNAI2O43623 TFAP4-201ENST00000204517 2215 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
SNAI2O43623 PHF1-201ENST00000374512 2224 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
SNAI2O43623 MATN4-201ENST00000353917 1657 ntTSL 5 BASIC13.88□□□□□ -0.19
SNAI2O43623 ZCWPW1-201ENST00000360951 2110 ntAPPRIS ALT2 TSL 2 BASIC13.88□□□□□ -0.19
SNAI2O43623 HIBCH-202ENST00000392332 2463 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
SNAI2O43623 PKD1P5-201ENST00000532415 10291 ntBASIC13.88□□□□□ -0.19
SNAI2O43623 P2RY6-202ENST00000393590 2398 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
SNAI2O43623 COL18A1-203ENST00000359759 6586 ntAPPRIS ALT2 TSL 5 BASIC13.88□□□□□ -0.19
SNAI2O43623 KDM5C-202ENST00000375379 5245 ntAPPRIS ALT2 TSL 5 BASIC13.88□□□□□ -0.19
SNAI2O43623 FDXR-214ENST00000581530 1827 ntAPPRIS P3 TSL 1 (best) BASIC13.88□□□□□ -0.19
SNAI2O43623 ARHGAP27-201ENST00000290470 1376 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
SNAI2O43623 MID1IP1-201ENST00000336949 2536 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
SNAI2O43623 TMEM74-201ENST00000297459 1741 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
SNAI2O43623 ADAMTSL5-201ENST00000330475 2857 ntAPPRIS P1 TSL 2 BASIC13.88□□□□□ -0.19
SNAI2O43623 TPBG-203ENST00000543496 2881 ntAPPRIS P1 TSL 2 BASIC13.88□□□□□ -0.19
SNAI2O43623 RNFT2-204ENST00000407967 2415 ntTSL 5 BASIC13.88□□□□□ -0.19
SNAI2O43623 LINC00471-201ENST00000313064 1282 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
SNAI2O43623 HSD17B10-202ENST00000375298 823 ntTSL 3 BASIC13.88□□□□□ -0.19
SNAI2O43623 PYCR3-202ENST00000377579 985 ntTSL 2 BASIC13.88□□□□□ -0.19
SNAI2O43623 N4BP2L1-203ENST00000380133 903 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
SNAI2O43623 CHCHD10-201ENST00000401675 691 ntAPPRIS P1 TSL 5 BASIC13.88□□□□□ -0.19
SNAI2O43623 TUBB8P6-201ENST00000436895 1288 ntBASIC13.88□□□□□ -0.19
SNAI2O43623 AC006557.6-201ENST00000623071 864 ntBASIC13.88□□□□□ -0.19
SNAI2O43623 ARHGEF40-201ENST00000298694 5919 ntAPPRIS P1 TSL 2 BASIC13.88□□□□□ -0.19
SNAI2O43623 GBGT1-203ENST00000372040 1980 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
SNAI2O43623 CHUK-201ENST00000370397 3625 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
SNAI2O43623 CTSA-201ENST00000191018 1898 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
SNAI2O43623 PPP1R3G-201ENST00000405617 4907 ntAPPRIS P1 BASIC13.88□□□□□ -0.19
SNAI2O43623 STARD7-AS1-202ENST00000446816 1527 ntTSL 2 BASIC13.88□□□□□ -0.19
SNAI2O43623 HSPB2-C11orf52-202ENST00000534100 1521 ntAPPRIS ALT2 TSL 2 BASIC13.88□□□□□ -0.19
SNAI2O43623 CTDP1-201ENST00000075430 3538 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
SNAI2O43623 PPFIA3-201ENST00000334186 4733 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
SNAI2O43623 STX5-202ENST00000377897 1785 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
SNAI2O43623 PPAN-P2RY11-201ENST00000393796 2385 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
SNAI2O43623 HIC2-201ENST00000407464 6798 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
SNAI2O43623 SMO-201ENST00000249373 3738 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
SNAI2O43623 NOP9-202ENST00000396802 1942 ntTSL 5 BASIC13.88□□□□□ -0.19
SNAI2O43623 TACC3-201ENST00000313288 2781 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
SNAI2O43623 SCAP-201ENST00000265565 4394 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
SNAI2O43623 POLR2C-201ENST00000219252 2057 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
SNAI2O43623 CTNNBL1-204ENST00000405275 2076 ntTSL 5 BASIC13.87□□□□□ -0.19
SNAI2O43623 SDCBP-202ENST00000413219 2086 ntAPPRIS P3 TSL 2 BASIC13.87□□□□□ -0.19
SNAI2O43623 TCTN1-225ENST00000551590 2309 ntAPPRIS ALT2 TSL 1 (best) BASIC13.87□□□□□ -0.19
SNAI2O43623 CTIF-201ENST00000256413 5750 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
SNAI2O43623 TSC2-204ENST00000401874 5421 ntAPPRIS ALT2 TSL 1 (best) BASIC13.87□□□□□ -0.19
SNAI2O43623 PCDHA8-201ENST00000378123 2616 ntAPPRIS ALT2 BASIC13.87□□□□□ -0.19
SNAI2O43623 SYNE3-202ENST00000553340 2615 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
SNAI2O43623 BABAM1-213ENST00000601043 1366 ntAPPRIS P3 TSL 2 BASIC13.87□□□□□ -0.19
SNAI2O43623 TRIL-201ENST00000539664 4935 ntAPPRIS P1 BASIC13.87□□□□□ -0.19
SNAI2O43623 HOXC11-201ENST00000243082 2039 ntTSL 3 BASIC13.87□□□□□ -0.19
SNAI2O43623 TUBGCP6-204ENST00000439308 6078 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
SNAI2O43623 BEND4-201ENST00000502486 8765 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
SNAI2O43623 GCC2-AS1-201ENST00000322353 558 ntTSL 2 BASIC13.87□□□□□ -0.19
SNAI2O43623 PGPEP1L-201ENST00000378919 995 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
SNAI2O43623 EIF5A-205ENST00000419711 1271 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
SNAI2O43623 AC007285.1-201ENST00000422239 893 ntTSL 5 BASIC13.87□□□□□ -0.19
SNAI2O43623 AC104986.2-201ENST00000521696 380 ntTSL 2 BASIC13.87□□□□□ -0.19
SNAI2O43623 CKLF-CMTM1-204ENST00000532838 587 ntAPPRIS ALT2 TSL 4 BASIC13.87□□□□□ -0.19
SNAI2O43623 AC007786.1-201ENST00000587859 709 ntTSL 2 BASIC13.87□□□□□ -0.19
SNAI2O43623 DCAKD-205ENST00000588499 990 ntAPPRIS P1 TSL 2 BASIC13.87□□□□□ -0.19
SNAI2O43623 JOSD2-202ENST00000595669 733 ntTSL 2 BASIC13.87□□□□□ -0.19
SNAI2O43623 MARS-234ENST00000630571 216 ntTSL 5 BASIC13.87□□□□□ -0.19
SNAI2O43623 MARS-235ENST00000630803 183 ntTSL 3 BASIC13.87□□□□□ -0.19
SNAI2O43623 HSD17B12-213ENST00000637401 866 ntTSL 4 BASIC13.87□□□□□ -0.19
SNAI2O43623 ETNK2-203ENST00000367202 2434 ntAPPRIS P3 TSL 1 (best) BASIC13.87□□□□□ -0.19
SNAI2O43623 KLC1-217ENST00000554280 2426 ntTSL 5 BASIC13.87□□□□□ -0.19
SNAI2O43623 AD000671.2-201ENST00000589807 1925 ntAPPRIS P1 TSL 2 BASIC13.87□□□□□ -0.19
SNAI2O43623 KIF16B-203ENST00000408042 4640 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
SNAI2O43623 PMS1-213ENST00000441310 3225 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
SNAI2O43623 VSX2-201ENST00000261980 2995 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
SNAI2O43623 DDHD2-201ENST00000397166 4921 ntAPPRIS P1 TSL 2 BASIC13.87□□□□□ -0.19
SNAI2O43623 SALRNA1-201ENST00000555871 2086 ntTSL 4 BASIC13.87□□□□□ -0.19
SNAI2O43623 ZBTB47-202ENST00000505904 2456 ntTSL 5 BASIC13.87□□□□□ -0.19
SNAI2O43623 RDH10-201ENST00000240285 3949 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
SNAI2O43623 ANKRD13D-201ENST00000308440 2219 ntTSL 2 BASIC13.87□□□□□ -0.19
SNAI2O43623 MAPK8IP1-202ENST00000395629 3180 ntTSL 5 BASIC13.87□□□□□ -0.19
SNAI2O43623 CD58-203ENST00000457047 1328 ntAPPRIS ALT2 TSL 1 (best) BASIC13.87□□□□□ -0.19
SNAI2O43623 PRR23B-201ENST00000329447 1896 ntAPPRIS P1 BASIC13.87□□□□□ -0.19
SNAI2O43623 RHBDL1-202ENST00000352681 1463 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
SNAI2O43623 IL6R-208ENST00000622330 1496 ntAPPRIS ALT2 TSL 1 (best) BASIC13.87□□□□□ -0.19
SNAI2O43623 EPOR-201ENST00000222139 2411 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
SNAI2O43623 NDRG1-202ENST00000414097 3755 ntAPPRIS P1 TSL 2 BASIC13.86□□□□□ -0.19
SNAI2O43623 MAPKAP1-208ENST00000394063 2977 ntTSL 5 BASIC13.86□□□□□ -0.19
SNAI2O43623 PDE2A-226ENST00000544570 3119 ntTSL 5 BASIC13.86□□□□□ -0.19
SNAI2O43623 AC006064.2-201ENST00000501075 2196 ntTSL 2 BASIC13.86□□□□□ -0.19
SNAI2O43623 ZBTB9-201ENST00000395064 2716 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
SNAI2O43623 MAP4K3-201ENST00000263881 4362 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
SNAI2O43623 SLC35B2-207ENST00000619636 2063 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
SNAI2O43623 P4HB-203ENST00000439918 1502 ntTSL 5 BASIC13.86□□□□□ -0.19
SNAI2O43623 NTMT1-210ENST00000613644 1501 ntAPPRIS P1 TSL 3 BASIC13.86□□□□□ -0.19
SNAI2O43623 TMEM198B-203ENST00000482378 2230 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
SNAI2O43623 YTHDF3-212ENST00000621413 2370 ntTSL 5 BASIC13.86□□□□□ -0.19
SNAI2O43623 ADAMTS16-203ENST00000511368 2682 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
SNAI2O43623 TTC22-201ENST00000371274 2149 ntTSL 2 BASIC13.86□□□□□ -0.19
SNAI2O43623 BX276092.2-201ENST00000417668 665 ntBASIC13.86□□□□□ -0.19
SNAI2O43623 CSF1-205ENST00000420111 1083 ntTSL 5 BASIC13.86□□□□□ -0.19
SNAI2O43623 OCIAD2-205ENST00000508632 1163 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
SNAI2O43623 PHB2-213ENST00000546111 858 ntTSL 2 BASIC13.86□□□□□ -0.19
SNAI2O43623 AL929601.1-201ENST00000551565 573 ntTSL 4 BASIC13.86□□□□□ -0.19
Retrieved 100 of 98,524 protein–RNA pairs in 21.4 ms