Protein–RNA interactions for Protein: O15269

SPTLC1, Serine palmitoyltransferase 1, humanhuman

Predictions only

Length 473 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SPTLC1O15269 SLC35B2-207ENST00000619636 2063 ntTSL 1 (best) BASIC19.85■□□□□ 0.77
SPTLC1O15269 ULK1-201ENST00000321867 5310 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
SPTLC1O15269 ZNF655-203ENST00000357864 1370 ntTSL 2 BASIC19.84■□□□□ 0.77
SPTLC1O15269 BHLHE22-201ENST00000321870 3262 ntAPPRIS P1 BASIC19.84■□□□□ 0.77
SPTLC1O15269 WDR18-202ENST00000585809 1608 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
SPTLC1O15269 FA2H-201ENST00000219368 2424 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
SPTLC1O15269 PLCB2-204ENST00000557821 4517 ntAPPRIS ALT1 TSL 1 (best) BASIC19.84■□□□□ 0.77
SPTLC1O15269 ACOT4-201ENST00000326303 2362 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
SPTLC1O15269 AC020661.1-201ENST00000503052 1584 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
SPTLC1O15269 PLPBP-201ENST00000328195 2558 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
SPTLC1O15269 TLCD1-201ENST00000292090 1017 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
SPTLC1O15269 IFT27-201ENST00000340630 1113 ntAPPRIS P3 TSL 1 (best) BASIC19.84■□□□□ 0.77
SPTLC1O15269 INSL3-202ENST00000379695 899 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
SPTLC1O15269 SNHG7-203ENST00000436596 509 ntTSL 2 BASIC19.84■□□□□ 0.77
SPTLC1O15269 AP000777.3-201ENST00000538705 491 ntTSL 3 BASIC19.84■□□□□ 0.77
SPTLC1O15269 AL136038.4-201ENST00000603606 1261 ntBASIC19.84■□□□□ 0.77
SPTLC1O15269 EGFL7-204ENST00000406555 1529 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
SPTLC1O15269 ACADS-201ENST00000242592 1950 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
SPTLC1O15269 CA7-202ENST00000394069 1713 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
SPTLC1O15269 FARSA-202ENST00000423140 1720 ntTSL 2 BASIC19.84■□□□□ 0.77
SPTLC1O15269 SPAG1-206ENST00000520643 1723 ntTSL 2 BASIC19.84■□□□□ 0.77
SPTLC1O15269 PCCA-201ENST00000376279 2418 ntTSL 2 BASIC19.84■□□□□ 0.77
SPTLC1O15269 KHNYN-206ENST00000556842 2443 ntAPPRIS P1 TSL 2 BASIC19.84■□□□□ 0.77
SPTLC1O15269 SEMA3D-202ENST00000444867 1605 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
SPTLC1O15269 ZAR1L-202ENST00000533490 1564 ntAPPRIS P1 TSL 5 BASIC19.83■□□□□ 0.77
SPTLC1O15269 OBSL1-204ENST00000404537 5841 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
SPTLC1O15269 ELMOD1-202ENST00000443271 1990 ntAPPRIS P1 TSL 2 BASIC19.83■□□□□ 0.77
SPTLC1O15269 IDH3G-202ENST00000370092 1712 ntTSL 5 BASIC19.83■□□□□ 0.77
SPTLC1O15269 COBL-210ENST00000632460 1941 ntTSL 5 BASIC19.83■□□□□ 0.77
SPTLC1O15269 CASP9-210ENST00000546424 4463 ntAPPRIS ALT2 TSL 5 BASIC19.83■□□□□ 0.77
SPTLC1O15269 BCL2L10-201ENST00000260442 1249 ntAPPRIS P3 TSL 1 (best) BASIC19.83■□□□□ 0.77
SPTLC1O15269 PDLIM7-205ENST00000393551 1226 ntTSL 1 (best) BASIC19.83■□□□□ 0.77
SPTLC1O15269 TTC3-203ENST00000399010 2115 ntTSL 5 BASIC19.83■□□□□ 0.77
SPTLC1O15269 AC138207.7-201ENST00000584499 668 ntTSL 5 BASIC19.83■□□□□ 0.77
SPTLC1O15269 NDUFV2-AS1-203ENST00000608008 779 ntBASIC19.83■□□□□ 0.77
SPTLC1O15269 IFNL4-202ENST00000616270 1132 ntAPPRIS ALT2 TSL 1 (best) BASIC19.83■□□□□ 0.77
SPTLC1O15269 CADM1-222ENST00000616271 1246 ntTSL 5 BASIC19.83■□□□□ 0.77
SPTLC1O15269 AL807752.6-202ENST00000622933 765 ntAPPRIS P5 TSL 3 BASIC19.83■□□□□ 0.77
SPTLC1O15269 LUC7L-201ENST00000293872 1456 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.76
SPTLC1O15269 BTG3-201ENST00000339775 1485 ntTSL 1 (best) BASIC19.83■□□□□ 0.76
SPTLC1O15269 AC099343.3-201ENST00000605834 2503 ntBASIC19.83■□□□□ 0.76
SPTLC1O15269 MEF2B-201ENST00000409224 1683 ntTSL 2 BASIC19.83■□□□□ 0.76
SPTLC1O15269 SLC2A14-214ENST00000542505 1650 ntTSL 1 (best) BASIC19.83■□□□□ 0.76
SPTLC1O15269 MORC4-201ENST00000255495 2940 ntAPPRIS ALT2 TSL 1 (best) BASIC19.83■□□□□ 0.76
SPTLC1O15269 OSM-201ENST00000215781 1854 ntAPPRIS P3 TSL 1 (best) BASIC19.83■□□□□ 0.76
SPTLC1O15269 NAGPA-AS1-202ENST00000632058 2265 ntTSL 2 BASIC19.83■□□□□ 0.76
SPTLC1O15269 UNKL-202ENST00000301712 1431 ntTSL 1 (best) BASIC19.83■□□□□ 0.76
SPTLC1O15269 TEKT5-201ENST00000283025 1612 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.76
SPTLC1O15269 WRB-201ENST00000333781 1616 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.76
SPTLC1O15269 CASC2-205ENST00000454781 2216 ntTSL 1 (best) BASIC19.83■□□□□ 0.76
SPTLC1O15269 CCDC88B-202ENST00000356786 4915 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.76
SPTLC1O15269 FOXL2-201ENST00000330315 2917 ntAPPRIS P1 BASIC19.82■□□□□ 0.76
SPTLC1O15269 PCED1A-201ENST00000356872 1706 ntTSL 2 BASIC19.82■□□□□ 0.76
SPTLC1O15269 ZACN-201ENST00000334586 1335 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
SPTLC1O15269 NTMT1-203ENST00000372483 1315 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
SPTLC1O15269 CAPZB-202ENST00000264203 2068 ntTSL 2 BASIC19.82■□□□□ 0.76
SPTLC1O15269 TYMS-203ENST00000323274 1662 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
SPTLC1O15269 MRGPRF-AS1-201ENST00000538407 1490 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
SPTLC1O15269 CNP-204ENST00000472031 1019 ntTSL 2 BASIC19.82■□□□□ 0.76
SPTLC1O15269 AC116353.4-201ENST00000507279 576 ntTSL 4 BASIC19.82■□□□□ 0.76
SPTLC1O15269 PTN-201ENST00000348225 1614 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
SPTLC1O15269 LAT-204ENST00000395461 1448 ntAPPRIS ALT2 TSL 1 (best) BASIC19.82■□□□□ 0.76
SPTLC1O15269 SLC31A2-201ENST00000259392 1785 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
SPTLC1O15269 PLEKHH3-204ENST00000591022 2983 ntAPPRIS P2 TSL 1 (best) BASIC19.82■□□□□ 0.76
SPTLC1O15269 OSMR-202ENST00000502536 1740 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
SPTLC1O15269 ERCC2-205ENST00000485403 1538 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
SPTLC1O15269 RNF212-202ENST00000382968 2335 ntAPPRIS P3 TSL 1 (best) BASIC19.81■□□□□ 0.76
SPTLC1O15269 RIMBP3B-201ENST00000620804 6105 ntAPPRIS P1 BASIC19.81■□□□□ 0.76
SPTLC1O15269 MARK1-203ENST00000402574 5273 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
SPTLC1O15269 ITPKB-202ENST00000366784 3146 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
SPTLC1O15269 CDK13-202ENST00000340829 5066 ntAPPRIS ALT1 TSL 1 (best) BASIC19.81■□□□□ 0.76
SPTLC1O15269 NAF1-202ENST00000422287 1604 ntAPPRIS ALT2 TSL 1 (best) BASIC19.81■□□□□ 0.76
SPTLC1O15269 HOXC10-201ENST00000303460 1936 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
SPTLC1O15269 PXMP4-201ENST00000217398 979 ntTSL 2 BASIC19.81■□□□□ 0.76
SPTLC1O15269 BEX1-201ENST00000372728 864 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
SPTLC1O15269 MIR3180-4-201ENST00000582223 153 ntBASIC19.81■□□□□ 0.76
SPTLC1O15269 CCDC106-206ENST00000591241 1153 ntTSL 3 BASIC19.81■□□□□ 0.76
SPTLC1O15269 AC093458.2-201ENST00000623150 629 ntBASIC19.81■□□□□ 0.76
SPTLC1O15269 TRIM61-201ENST00000329314 1582 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
SPTLC1O15269 EOMES-202ENST00000449599 2829 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
SPTLC1O15269 PRSS33-201ENST00000293851 1694 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
SPTLC1O15269 RHOBTB2-201ENST00000251822 5451 ntAPPRIS P3 TSL 1 (best) BASIC19.81■□□□□ 0.76
SPTLC1O15269 KCNH2-202ENST00000330883 3267 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
SPTLC1O15269 NEK2-205ENST00000540251 1318 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
SPTLC1O15269 WFDC1-203ENST00000568638 1319 ntAPPRIS P1 TSL 2 BASIC19.8■□□□□ 0.76
SPTLC1O15269 RETREG2-203ENST00000430297 4618 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
SPTLC1O15269 LURAP1-201ENST00000371980 1854 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
SPTLC1O15269 GUCA1A-201ENST00000053469 1874 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
SPTLC1O15269 COL4A3BP-201ENST00000261415 2262 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
SPTLC1O15269 C20orf196-201ENST00000303142 1154 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
SPTLC1O15269 RNF216P1-205ENST00000406089 807 ntTSL 5 BASIC19.8■□□□□ 0.76
SPTLC1O15269 AL645929.1-201ENST00000420084 975 ntBASIC19.8■□□□□ 0.76
SPTLC1O15269 HCG4P8-203ENST00000443049 980 ntBASIC19.8■□□□□ 0.76
SPTLC1O15269 IFI27L1-206ENST00000554562 571 ntTSL 3 BASIC19.8■□□□□ 0.76
SPTLC1O15269 TBC1D9B-220ENST00000630103 303 ntTSL 5 BASIC19.8■□□□□ 0.76
SPTLC1O15269 PHKA1-204ENST00000373545 6173 ntTSL 5 BASIC19.8■□□□□ 0.76
SPTLC1O15269 EML3-217ENST00000531557 2509 ntTSL 5 BASIC19.8■□□□□ 0.76
SPTLC1O15269 PDLIM3-212ENST00000620787 2352 ntTSL 4 BASIC19.8■□□□□ 0.76
SPTLC1O15269 ARFRP1-207ENST00000612157 1698 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
SPTLC1O15269 SDF4-201ENST00000263741 2079 ntAPPRIS P3 TSL 1 (best) BASIC19.8■□□□□ 0.76
Retrieved 100 of 98,524 protein–RNA pairs in 25.3 ms