Protein–RNA interactions for Protein: O14562

UBFD1, Ubiquitin domain-containing protein UBFD1, humanhuman

Known RBP Predictions only

Length 309 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBFD1O14562 GPAT2P1-201ENST00000444924 1672 ntBASIC18.02■□□□□ 0.47
UBFD1O14562 SMN2-202ENST00000380742 1388 ntAPPRIS ALT2 TSL 5 BASIC18.02■□□□□ 0.47
UBFD1O14562 WDTC1-201ENST00000319394 4819 ntAPPRIS ALT1 TSL 1 (best) BASIC18.02■□□□□ 0.47
UBFD1O14562 MED9-201ENST00000268711 2228 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.47
UBFD1O14562 TOR2A-205ENST00000463577 2211 ntTSL 1 (best) BASIC18.02■□□□□ 0.47
UBFD1O14562 FRS3-201ENST00000259748 2094 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.47
UBFD1O14562 FERMT2-204ENST00000399304 2082 ntTSL 1 (best) BASIC18.02■□□□□ 0.47
UBFD1O14562 RNF135-201ENST00000324689 1905 ntTSL 1 (best) BASIC18.02■□□□□ 0.47
UBFD1O14562 SNAPC3-207ENST00000610884 2453 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
UBFD1O14562 NUDT17-201ENST00000334513 1473 ntAPPRIS P1 TSL 5 BASIC18.01■□□□□ 0.47
UBFD1O14562 FSCN1P1-201ENST00000568912 1481 ntBASIC18.01■□□□□ 0.47
UBFD1O14562 ZNF416-201ENST00000196489 2561 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
UBFD1O14562 GFY-201ENST00000576655 1876 ntAPPRIS P1 TSL 5 BASIC18.01■□□□□ 0.47
UBFD1O14562 AC116565.2-201ENST00000637674 1854 ntTSL 2 BASIC18.01■□□□□ 0.47
UBFD1O14562 HOTTIP-202ENST00000472494 2285 ntTSL 2 BASIC18.01■□□□□ 0.47
UBFD1O14562 RABEP2-202ENST00000358201 2821 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
UBFD1O14562 ETS1-207ENST00000531611 2134 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
UBFD1O14562 PSMD8-207ENST00000592035 1581 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
UBFD1O14562 UBAP1-203ENST00000379186 2524 ntTSL 5 BASIC18.01■□□□□ 0.47
UBFD1O14562 AC099343.3-201ENST00000605834 2503 ntBASIC18.01■□□□□ 0.47
UBFD1O14562 ADAMTS19-AS1-201ENST00000502827 786 ntTSL 4 BASIC18.01■□□□□ 0.47
UBFD1O14562 AC007493.2-201ENST00000568427 478 ntTSL 3 BASIC18.01■□□□□ 0.47
UBFD1O14562 OAZ1-211ENST00000602676 1148 ntAPPRIS P3 TSL 5 BASIC18.01■□□□□ 0.47
UBFD1O14562 ASRGL1-211ENST00000628829 1161 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
UBFD1O14562 AC004706.3-201ENST00000634558 1009 ntTSL 5 BASIC18.01■□□□□ 0.47
UBFD1O14562 ALDH3A1-206ENST00000457500 1925 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
UBFD1O14562 AC139491.1-201ENST00000512675 1516 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
UBFD1O14562 TRIM50-201ENST00000333149 2047 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
UBFD1O14562 HDAC10-201ENST00000216271 2687 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
UBFD1O14562 CD40-201ENST00000372276 1623 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
UBFD1O14562 C9orf66-201ENST00000382387 2918 ntAPPRIS P1 BASIC18.01■□□□□ 0.47
UBFD1O14562 RTN4-207ENST00000402434 1456 ntTSL 5 BASIC18.01■□□□□ 0.47
UBFD1O14562 TOX2-205ENST00000423191 1709 ntTSL 2 BASIC18.01■□□□□ 0.47
UBFD1O14562 MATN4-205ENST00000537548 1991 ntAPPRIS ALT2 TSL 5 BASIC18■□□□□ 0.47
UBFD1O14562 TRIM15-207ENST00000376694 2214 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
UBFD1O14562 PIGZ-202ENST00000412723 2701 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
UBFD1O14562 KIF26A-202ENST00000423312 5649 ntAPPRIS P2 TSL 5 BASIC18■□□□□ 0.47
UBFD1O14562 MOAP1-201ENST00000298894 2441 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
UBFD1O14562 PRRT1-201ENST00000211413 1909 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
UBFD1O14562 PNLDC1-207ENST00000610273 1940 ntTSL 1 (best) BASIC18■□□□□ 0.47
UBFD1O14562 SCYL1-202ENST00000279270 1659 ntTSL 5 BASIC18■□□□□ 0.47
UBFD1O14562 AC012615.6-201ENST00000593201 1697 ntTSL 2 BASIC18■□□□□ 0.47
UBFD1O14562 NAT8L-201ENST00000331662 5571 ntTSL 1 (best) BASIC18■□□□□ 0.47
UBFD1O14562 HEXIM2-201ENST00000307275 1528 ntAPPRIS P1 TSL 2 BASIC18■□□□□ 0.47
UBFD1O14562 EFEMP2-210ENST00000528176 1504 ntTSL 5 BASIC18■□□□□ 0.47
UBFD1O14562 MCAT-202ENST00000327555 1134 ntTSL 1 (best) BASIC18■□□□□ 0.47
UBFD1O14562 BSX-201ENST00000343035 830 ntAPPRIS P1 TSL 5 BASIC18■□□□□ 0.47
UBFD1O14562 S100A14-203ENST00000368701 1080 ntAPPRIS P1 TSL 2 BASIC18■□□□□ 0.47
UBFD1O14562 HOTAIRM1-203ENST00000429611 722 ntTSL 1 (best) BASIC18■□□□□ 0.47
UBFD1O14562 FAM86C2P-201ENST00000525180 435 ntTSL 4 BASIC18■□□□□ 0.47
UBFD1O14562 SPIB-206ENST00000596074 847 ntTSL 2 BASIC18■□□□□ 0.47
UBFD1O14562 NTAN1-211ENST00000622833 1049 ntTSL 2 BASIC18■□□□□ 0.47
UBFD1O14562 NTAN1-212ENST00000624579 1115 ntTSL 2 BASIC18■□□□□ 0.47
UBFD1O14562 KRT16P6-201ENST00000417510 1873 ntTSL 5 BASIC18■□□□□ 0.47
UBFD1O14562 TPRA1-204ENST00000450633 1865 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
UBFD1O14562 AC134043.2-201ENST00000624206 2238 ntBASIC18■□□□□ 0.47
UBFD1O14562 PRSS36-201ENST00000268281 2840 ntAPPRIS P3 TSL 1 (best) BASIC18■□□□□ 0.47
UBFD1O14562 SPAST-203ENST00000615843 5212 ntAPPRIS P4 TSL 1 (best) BASIC18■□□□□ 0.47
UBFD1O14562 ZNF211-203ENST00000299871 2577 ntAPPRIS ALT2 TSL 3 BASIC18■□□□□ 0.47
UBFD1O14562 AC096733.2-201ENST00000609937 1394 ntBASIC18■□□□□ 0.47
UBFD1O14562 NMRK1-203ENST00000376811 2050 ntTSL 2 BASIC18■□□□□ 0.47
UBFD1O14562 FAM53A-205ENST00000472884 2086 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
UBFD1O14562 PCDHA8-201ENST00000378123 2616 ntAPPRIS ALT2 BASIC18■□□□□ 0.47
UBFD1O14562 LTB4R2-202ENST00000528054 3092 ntBASIC18■□□□□ 0.47
UBFD1O14562 XXYLT1-201ENST00000310380 2727 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
UBFD1O14562 HNRNPK-202ENST00000360384 2038 ntAPPRIS ALT1 TSL 1 (best) BASIC17.99■□□□□ 0.47
UBFD1O14562 POLD3-203ENST00000527458 2122 ntTSL 1 (best) BASIC17.99■□□□□ 0.47
UBFD1O14562 ASCL5-202ENST00000458416 1420 ntAPPRIS P1 BASIC17.99■□□□□ 0.47
UBFD1O14562 TBC1D2B-202ENST00000409931 6086 ntAPPRIS P3 TSL 1 (best) BASIC17.99■□□□□ 0.47
UBFD1O14562 WDR25-202ENST00000402312 1969 ntAPPRIS P1 TSL 2 BASIC17.99■□□□□ 0.47
UBFD1O14562 TCF7-204ENST00000395029 3330 ntAPPRIS ALT2 TSL 5 BASIC17.99■□□□□ 0.47
UBFD1O14562 ZNRF3-203ENST00000544604 6851 ntAPPRIS ALT2 TSL 1 (best) BASIC17.99■□□□□ 0.47
UBFD1O14562 RELA-226ENST00000612991 2266 ntTSL 1 (best) BASIC17.99■□□□□ 0.47
UBFD1O14562 NDUFA12-201ENST00000327772 635 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
UBFD1O14562 ABHD17AP1-201ENST00000358206 933 ntBASIC17.99■□□□□ 0.47
UBFD1O14562 LINC01122-201ENST00000422723 675 ntTSL 3 BASIC17.99■□□□□ 0.47
UBFD1O14562 TMEM240-202ENST00000425828 717 ntAPPRIS P1 TSL 2 BASIC17.99■□□□□ 0.47
UBFD1O14562 AC073050.1-201ENST00000442316 462 ntTSL 3 BASIC17.99■□□□□ 0.47
UBFD1O14562 SMG1P1-207ENST00000446662 852 ntTSL 5 BASIC17.99■□□□□ 0.47
UBFD1O14562 MAGI2-AS3-211ENST00000451809 707 ntTSL 3 BASIC17.99■□□□□ 0.47
UBFD1O14562 BNIP3L-206ENST00000523515 915 ntTSL 2 BASIC17.99■□□□□ 0.47
UBFD1O14562 CD177P1-201ENST00000606252 935 ntBASIC17.99■□□□□ 0.47
UBFD1O14562 NFIX-202ENST00000360105 5459 ntTSL 5 BASIC17.99■□□□□ 0.47
UBFD1O14562 ZNF200-202ENST00000396870 2373 ntAPPRIS ALT2 TSL 1 (best) BASIC17.99■□□□□ 0.47
UBFD1O14562 PRMT1-201ENST00000391851 1393 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
UBFD1O14562 ARMC10-209ENST00000454559 2347 ntTSL 1 (best) BASIC17.99■□□□□ 0.47
UBFD1O14562 TNFAIP1-202ENST00000544907 1656 ntTSL 2 BASIC17.99■□□□□ 0.47
UBFD1O14562 SLCO6A1-201ENST00000379807 2437 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
UBFD1O14562 RIMKLB-202ENST00000357529 5830 ntAPPRIS P1 TSL 5 BASIC17.99■□□□□ 0.47
UBFD1O14562 SRI-203ENST00000419179 1307 ntTSL 2 BASIC17.98■□□□□ 0.47
UBFD1O14562 SYT15-205ENST00000503753 1331 ntAPPRIS ALT2 TSL 1 (best) BASIC17.98■□□□□ 0.47
UBFD1O14562 TMEM191C-214ENST00000621561 1337 ntAPPRIS P2 TSL 5 BASIC17.98■□□□□ 0.47
UBFD1O14562 CYP2D6-201ENST00000359033 1433 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
UBFD1O14562 TMEM234-203ENST00000373593 1411 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
UBFD1O14562 NARFL-218ENST00000568545 2486 ntTSL 2 BASIC17.98■□□□□ 0.47
UBFD1O14562 RIC8A-208ENST00000527696 2565 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
UBFD1O14562 DLG3-202ENST00000374355 5074 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
UBFD1O14562 RPL32-202ENST00000396953 1734 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
UBFD1O14562 ANKRD6-204ENST00000447838 2968 ntAPPRIS P3 TSL 1 (best) BASIC17.98■□□□□ 0.47
UBFD1O14562 GRAMD2B-218ENST00000542322 2977 ntTSL 2 BASIC17.98■□□□□ 0.47
Retrieved 100 of 98,524 protein–RNA pairs in 30.5 ms