Protein–RNA interactions for Protein: O00635

TRIM38, E3 ubiquitin-protein ligase TRIM38, humanhuman

Predictions only

Length 465 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM38O00635 CATIP-AS1-202ENST00000441749 480 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
TRIM38O00635 REPIN1-217ENST00000518514 478 ntTSL 3 BASIC18.67■□□□□ 0.58
TRIM38O00635 LCE1C-202ENST00000607093 644 ntAPPRIS P2 BASIC18.67■□□□□ 0.58
TRIM38O00635 ANKS3-201ENST00000304283 2662 ntAPPRIS P1 TSL 2 BASIC18.67■□□□□ 0.58
TRIM38O00635 SLC52A2-209ENST00000530047 1757 ntAPPRIS P1 TSL 2 BASIC18.67■□□□□ 0.58
TRIM38O00635 SLC23A3-201ENST00000295738 2037 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
TRIM38O00635 MZT1-201ENST00000377818 2299 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
TRIM38O00635 ANKS3-202ENST00000446014 2265 ntTSL 5 BASIC18.67■□□□□ 0.58
TRIM38O00635 VLDLR-AS1-205ENST00000599229 1346 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
TRIM38O00635 MAGED2-203ENST00000375053 2066 ntAPPRIS P2 TSL 1 (best) BASIC18.67■□□□□ 0.58
TRIM38O00635 PCDHA2-203ENST00000526136 5254 ntAPPRIS P2 TSL 1 (best) BASIC18.67■□□□□ 0.58
TRIM38O00635 ACAP3-202ENST00000354700 3896 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
TRIM38O00635 PEX16-210ENST00000532681 1639 ntTSL 3 BASIC18.67■□□□□ 0.58
TRIM38O00635 CORO1A-216ENST00000570045 1622 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
TRIM38O00635 CNOT9-209ENST00000627282 1621 ntTSL 2 BASIC18.67■□□□□ 0.58
TRIM38O00635 LRRC25-201ENST00000339007 2415 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
TRIM38O00635 NADK-201ENST00000341426 3235 ntAPPRIS P3 TSL 2 BASIC18.66■□□□□ 0.58
TRIM38O00635 UNKL-202ENST00000301712 1431 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
TRIM38O00635 PRSS23-201ENST00000280258 4015 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
TRIM38O00635 ERLIN2-202ENST00000335171 1742 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
TRIM38O00635 FAM213B-205ENST00000444521 2827 ntAPPRIS ALT2 TSL 2 BASIC18.66■□□□□ 0.58
TRIM38O00635 AL031658.1-201ENST00000449519 2013 ntTSL 2 BASIC18.66■□□□□ 0.58
TRIM38O00635 DSCC1-201ENST00000313655 2314 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
TRIM38O00635 MMP9-201ENST00000372330 2336 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
TRIM38O00635 KIAA1324L-208ENST00000450689 6841 ntAPPRIS ALT2 TSL 5 BASIC18.66■□□□□ 0.58
TRIM38O00635 TXNRD3-205ENST00000640797 1824 ntAPPRIS ALT2 TSL 2 BASIC18.66■□□□□ 0.58
TRIM38O00635 KCNQ5-203ENST00000355635 6623 ntAPPRIS ALT1 TSL 5 BASIC18.66■□□□□ 0.58
TRIM38O00635 GPR32-201ENST00000270590 1269 ntAPPRIS P1 BASIC18.66■□□□□ 0.58
TRIM38O00635 SMIM19-202ENST00000416469 691 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
TRIM38O00635 LINC01293-201ENST00000453951 1266 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
TRIM38O00635 MVB12A-204ENST00000528515 686 ntTSL 5 BASIC18.66■□□□□ 0.58
TRIM38O00635 TOLLIP-AS1-201ENST00000530897 939 ntBASIC18.66■□□□□ 0.58
TRIM38O00635 ANKRD34C-AS1-203ENST00000559225 528 ntTSL 4 BASIC18.66■□□□□ 0.58
TRIM38O00635 NT5C-210ENST00000582160 860 ntTSL 2 BASIC18.66■□□□□ 0.58
TRIM38O00635 AC215522.2-202ENST00000633163 1143 ntTSL 5 BASIC18.66■□□□□ 0.58
TRIM38O00635 AC005332.8-201ENST00000622750 2735 ntBASIC18.66■□□□□ 0.58
TRIM38O00635 ACSF2-201ENST00000300441 2235 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
TRIM38O00635 AC135050.7-201ENST00000624508 2218 ntBASIC18.66■□□□□ 0.58
TRIM38O00635 CALHM3-201ENST00000369783 1652 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
TRIM38O00635 EDEM1-204ENST00000445686 1363 ntTSL 2 BASIC18.66■□□□□ 0.58
TRIM38O00635 HMBS-221ENST00000544387 1351 ntTSL 2 BASIC18.66■□□□□ 0.58
TRIM38O00635 RPS6KB2-201ENST00000312629 1733 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
TRIM38O00635 ANKRD10-201ENST00000267339 2495 ntAPPRIS P1 TSL 2 BASIC18.65■□□□□ 0.58
TRIM38O00635 AC011416.4-201ENST00000639283 2195 ntTSL 5 BASIC18.65■□□□□ 0.58
TRIM38O00635 ACTL6A-201ENST00000392662 1899 ntTSL 2 BASIC18.65■□□□□ 0.58
TRIM38O00635 EWSR1-207ENST00000406548 2207 ntAPPRIS ALT2 TSL 1 (best) BASIC18.65■□□□□ 0.58
TRIM38O00635 MRPL2-202ENST00000388752 1588 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
TRIM38O00635 COMP-202ENST00000425807 2292 ntTSL 2 BASIC18.65■□□□□ 0.58
TRIM38O00635 PKN1-201ENST00000242783 3069 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
TRIM38O00635 MADCAM1-203ENST00000382683 603 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
TRIM38O00635 KRTAP5-10-201ENST00000398531 1176 ntAPPRIS P1 BASIC18.65■□□□□ 0.58
TRIM38O00635 SNX5-210ENST00000481323 562 ntTSL 3 BASIC18.65■□□□□ 0.58
TRIM38O00635 TMEM41B-203ENST00000527813 803 ntTSL 5 BASIC18.65■□□□□ 0.58
TRIM38O00635 AP000777.3-201ENST00000538705 491 ntTSL 3 BASIC18.65■□□□□ 0.58
TRIM38O00635 MRPL46-202ENST00000558531 1002 ntTSL 2 BASIC18.65■□□□□ 0.58
TRIM38O00635 DHRS2-210ENST00000611765 1287 ntAPPRIS ALT2 TSL 2 BASIC18.65■□□□□ 0.58
TRIM38O00635 AC093458.2-201ENST00000623150 629 ntBASIC18.65■□□□□ 0.58
TRIM38O00635 CPEB2-202ENST00000345451 2013 ntAPPRIS ALT2 TSL 1 (best) BASIC18.65■□□□□ 0.58
TRIM38O00635 AC005332.1-201ENST00000577698 1310 ntBASIC18.65■□□□□ 0.58
TRIM38O00635 FAM91A1-201ENST00000334705 5511 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
TRIM38O00635 ACY1-206ENST00000476351 1409 ntTSL 3 BASIC18.65■□□□□ 0.58
TRIM38O00635 PAOX-201ENST00000278060 1858 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
TRIM38O00635 CORO1B-201ENST00000341356 1881 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
TRIM38O00635 GCDH-216ENST00000591470 1867 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
TRIM38O00635 SPAG4-201ENST00000374273 1453 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
TRIM38O00635 MAN1A1-201ENST00000368468 5014 ntAPPRIS P1 TSL 2 BASIC18.64■□□□□ 0.58
TRIM38O00635 ANKRD18DP-204ENST00000455355 1975 ntBASIC18.64■□□□□ 0.58
TRIM38O00635 MTFR1L-202ENST00000374301 2099 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
TRIM38O00635 ATF5-201ENST00000423777 2069 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
TRIM38O00635 AR-209ENST00000613054 3532 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
TRIM38O00635 WNT8B-201ENST00000343737 2112 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
TRIM38O00635 MARC2-202ENST00000366913 2134 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
TRIM38O00635 FAM187A-202ENST00000412523 1748 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
TRIM38O00635 LGI3-201ENST00000306317 3272 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
TRIM38O00635 PDIA5-201ENST00000316218 1799 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
TRIM38O00635 DEF8-211ENST00000563795 1767 ntTSL 5 BASIC18.64■□□□□ 0.57
TRIM38O00635 MALL-203ENST00000427178 1070 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
TRIM38O00635 PHB2-202ENST00000440277 996 ntTSL 5 BASIC18.64■□□□□ 0.57
TRIM38O00635 HIGD1A-204ENST00000452906 585 ntTSL 2 BASIC18.64■□□□□ 0.57
TRIM38O00635 NPM2-204ENST00000518119 1190 ntAPPRIS P2 TSL 1 (best) BASIC18.64■□□□□ 0.57
TRIM38O00635 TMEM218-206ENST00000527766 812 ntAPPRIS P1 TSL 3 BASIC18.64■□□□□ 0.57
TRIM38O00635 IGHMBP2-205ENST00000539224 785 ntTSL 3 BASIC18.64■□□□□ 0.57
TRIM38O00635 AC027682.5-201ENST00000567122 530 ntTSL 3 BASIC18.64■□□□□ 0.57
TRIM38O00635 AC138207.7-201ENST00000584499 668 ntTSL 5 BASIC18.64■□□□□ 0.57
TRIM38O00635 AC239803.1-201ENST00000594189 1278 ntTSL 5 BASIC18.64■□□□□ 0.57
TRIM38O00635 AL807752.6-202ENST00000622933 765 ntAPPRIS P5 TSL 3 BASIC18.64■□□□□ 0.57
TRIM38O00635 DFFB-212ENST00000625756 649 ntTSL 5 BASIC18.64■□□□□ 0.57
TRIM38O00635 FOXI3-201ENST00000428390 2804 ntAPPRIS P1 TSL 3 BASIC18.64■□□□□ 0.57
TRIM38O00635 TLX1-201ENST00000370196 2906 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
TRIM38O00635 DBN1-210ENST00000512501 1878 ntTSL 3 BASIC18.64■□□□□ 0.57
TRIM38O00635 GTF3C5-201ENST00000342018 1905 ntTSL 5 BASIC18.64■□□□□ 0.57
TRIM38O00635 NUMBL-202ENST00000540131 1931 ntAPPRIS ALT2 TSL 2 BASIC18.64■□□□□ 0.57
TRIM38O00635 KLHL40-201ENST00000287777 2517 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
TRIM38O00635 DHRS4-201ENST00000313250 1443 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
TRIM38O00635 P3H4-202ENST00000393928 2601 ntAPPRIS P2 TSL 1 (best) BASIC18.64■□□□□ 0.57
TRIM38O00635 STARD3-201ENST00000336308 2132 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
TRIM38O00635 ZNF302-206ENST00000505242 2849 ntAPPRIS P3 TSL 1 (best) BASIC18.64■□□□□ 0.57
TRIM38O00635 AIRE-201ENST00000291582 2257 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
TRIM38O00635 USP49-202ENST00000373010 2446 ntTSL 5 BASIC18.63■□□□□ 0.57
TRIM38O00635 WDR34-201ENST00000372715 1755 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Retrieved 100 of 98,524 protein–RNA pairs in 44.3 ms