Protein–RNA interactions for Protein: A8MV65

VGLL3, Transcription cofactor vestigial-like protein 3, humanhuman

Predictions only

Length 326 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VGLL3A8MV65 TPD52L2-204ENST00000351424 2302 ntAPPRIS P4 TSL 2 BASIC18.2■□□□□ 0.5
VGLL3A8MV65 COPS3-212ENST00000539941 1699 ntTSL 2 BASIC18.2■□□□□ 0.5
VGLL3A8MV65 DCTPP1-201ENST00000319285 1222 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
VGLL3A8MV65 MTURN-203ENST00000409688 843 ntTSL 2 BASIC18.2■□□□□ 0.5
VGLL3A8MV65 CCDC189-211ENST00000545825 1046 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
VGLL3A8MV65 ZNF584-205ENST00000596281 575 ntTSL 2 BASIC18.2■□□□□ 0.5
VGLL3A8MV65 AL139246.5-201ENST00000606645 996 ntBASIC18.2■□□□□ 0.5
VGLL3A8MV65 SHISA9-205ENST00000639941 1135 ntAPPRIS ALT2 TSL 5 BASIC18.2■□□□□ 0.5
VGLL3A8MV65 ELN-208ENST00000380575 3043 ntAPPRIS ALT2 TSL 1 (best) BASIC18.2■□□□□ 0.5
VGLL3A8MV65 GDPD1-201ENST00000284116 1821 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
VGLL3A8MV65 NAE1-201ENST00000290810 1837 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
VGLL3A8MV65 INTS11-202ENST00000411962 1832 ntTSL 5 BASIC18.2■□□□□ 0.5
VGLL3A8MV65 CASK-203ENST00000378163 4411 ntAPPRIS ALT1 TSL 5 BASIC18.2■□□□□ 0.5
VGLL3A8MV65 TSNARE1-208ENST00000524325 1963 ntAPPRIS P3 TSL 2 BASIC18.2■□□□□ 0.5
VGLL3A8MV65 SIX5-203ENST00000560168 1975 ntTSL 4 BASIC18.2■□□□□ 0.5
VGLL3A8MV65 EIF3J-202ENST00000424492 1550 ntTSL 4 BASIC18.2■□□□□ 0.5
VGLL3A8MV65 CNPY1-203ENST00000636372 2259 ntAPPRIS ALT2 TSL 5 BASIC18.2■□□□□ 0.5
VGLL3A8MV65 GGT5-203ENST00000398292 2408 ntAPPRIS ALT2 TSL 1 (best) BASIC18.2■□□□□ 0.5
VGLL3A8MV65 HTR7-202ENST00000336152 3126 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
VGLL3A8MV65 RBM26-203ENST00000438737 4132 ntTSL 5 BASIC18.2■□□□□ 0.5
VGLL3A8MV65 FMNL1-201ENST00000328118 2330 ntTSL 2 BASIC18.2■□□□□ 0.5
VGLL3A8MV65 LINC00574-201ENST00000420557 2318 ntTSL 2 BASIC18.2■□□□□ 0.5
VGLL3A8MV65 BCAR3-201ENST00000260502 3171 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
VGLL3A8MV65 DR1-201ENST00000370267 1647 ntAPPRIS P1 TSL 2 BASIC18.2■□□□□ 0.5
VGLL3A8MV65 ADCY1-204ENST00000621543 1647 ntTSL 5 BASIC18.2■□□□□ 0.5
VGLL3A8MV65 P3H4-202ENST00000393928 2601 ntAPPRIS P2 TSL 1 (best) BASIC18.19■□□□□ 0.5
VGLL3A8MV65 MC1R-202ENST00000555147 3099 ntAPPRIS P1 BASIC18.19■□□□□ 0.5
VGLL3A8MV65 LRIT1-201ENST00000372105 2228 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
VGLL3A8MV65 YY1AP1-206ENST00000359205 2690 ntAPPRIS ALT2 TSL 1 (best) BASIC18.19■□□□□ 0.5
VGLL3A8MV65 ZNF622-201ENST00000308683 1699 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
VGLL3A8MV65 PKIB-206ENST00000392490 1811 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
VGLL3A8MV65 HYLS1-203ENST00000526028 1803 ntAPPRIS P1 TSL 5 BASIC18.19■□□□□ 0.5
VGLL3A8MV65 HPGD-202ENST00000296522 3027 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
VGLL3A8MV65 CDC42BPG-201ENST00000342711 5742 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
VGLL3A8MV65 CDCP1-201ENST00000296129 6006 ntAPPRIS P3 TSL 1 (best) BASIC18.19■□□□□ 0.5
VGLL3A8MV65 HES4-201ENST00000304952 899 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
VGLL3A8MV65 PLPP1-202ENST00000307259 1597 ntAPPRIS ALT1 TSL 1 (best) BASIC18.19■□□□□ 0.5
VGLL3A8MV65 AC007128.1-201ENST00000424460 1853 ntTSL 5 BASIC18.19■□□□□ 0.5
VGLL3A8MV65 AC096719.1-201ENST00000510705 1874 ntTSL 5 BASIC18.19■□□□□ 0.5
VGLL3A8MV65 DUX4L19-201ENST00000557448 1267 ntBASIC18.19■□□□□ 0.5
VGLL3A8MV65 PPP1R14A-204ENST00000591291 433 ntTSL 5 BASIC18.19■□□□□ 0.5
VGLL3A8MV65 ENC1-207ENST00000618628 5657 ntAPPRIS P1 TSL 5 BASIC18.19■□□□□ 0.5
VGLL3A8MV65 TBK1-201ENST00000331710 3256 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
VGLL3A8MV65 MYCL-203ENST00000397332 3256 ntAPPRIS ALT2 TSL 1 (best) BASIC18.19■□□□□ 0.5
VGLL3A8MV65 HYAL1-201ENST00000266031 2517 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
VGLL3A8MV65 TOM1-204ENST00000411850 2390 ntAPPRIS ALT1 TSL 1 (best) BASIC18.19■□□□□ 0.5
VGLL3A8MV65 SLC29A2-207ENST00000619145 2380 ntTSL 5 BASIC18.19■□□□□ 0.5
VGLL3A8MV65 CADPS2-205ENST00000449022 4073 ntTSL 5 BASIC18.19■□□□□ 0.5
VGLL3A8MV65 KREMEN1-201ENST00000327813 2719 ntAPPRIS P3 TSL 2 BASIC18.19■□□□□ 0.5
VGLL3A8MV65 ZMYND15-202ENST00000433935 2411 ntAPPRIS P1 TSL 2 BASIC18.19■□□□□ 0.5
VGLL3A8MV65 ZC3H14-223ENST00000557607 1983 ntTSL 5 BASIC18.19■□□□□ 0.5
VGLL3A8MV65 TRMT2A-202ENST00000403707 2928 ntAPPRIS P3 TSL 1 (best) BASIC18.19■□□□□ 0.5
VGLL3A8MV65 IGSF1-204ENST00000370903 4594 ntAPPRIS ALT2 TSL 1 (best) BASIC18.18■□□□□ 0.5
VGLL3A8MV65 FAM227B-201ENST00000299338 2008 ntAPPRIS P3 TSL 2 BASIC18.18■□□□□ 0.5
VGLL3A8MV65 NFATC4-228ENST00000556759 2025 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
VGLL3A8MV65 HAND1-201ENST00000231121 1738 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
VGLL3A8MV65 ATG4B-205ENST00000404914 2878 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
VGLL3A8MV65 SLC35B2-207ENST00000619636 2063 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
VGLL3A8MV65 PPP3CB-201ENST00000342558 2418 ntTSL 5 BASIC18.18■□□□□ 0.5
VGLL3A8MV65 PMAIP1-202ENST00000316660 1948 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
VGLL3A8MV65 PLD3-201ENST00000356508 1906 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
VGLL3A8MV65 ANAPC2-201ENST00000323927 2632 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
VGLL3A8MV65 SLC37A4-217ENST00000545985 2606 ntAPPRIS P1 TSL 5 BASIC18.18■□□□□ 0.5
VGLL3A8MV65 NALT1-201ENST00000429224 738 ntTSL 5 BASIC18.18■□□□□ 0.5
VGLL3A8MV65 KRTAP5-4-202ENST00000616115 660 ntAPPRIS ALT2 TSL 5 BASIC18.18■□□□□ 0.5
VGLL3A8MV65 AC241377.3-202ENST00000626088 1088 ntBASIC18.18■□□□□ 0.5
VGLL3A8MV65 AC241585.3-202ENST00000628937 1088 ntBASIC18.18■□□□□ 0.5
VGLL3A8MV65 AC245100.8-202ENST00000629247 1058 ntBASIC18.18■□□□□ 0.5
VGLL3A8MV65 SLC35A3-216ENST00000639221 1032 ntTSL 5 BASIC18.18■□□□□ 0.5
VGLL3A8MV65 SNUPN-207ENST00000567134 1641 ntAPPRIS P1 TSL 5 BASIC18.18■□□□□ 0.5
VGLL3A8MV65 TMEM109-202ENST00000536171 1959 ntAPPRIS P1 TSL 2 BASIC18.18■□□□□ 0.5
VGLL3A8MV65 TSC2-204ENST00000401874 5421 ntAPPRIS ALT2 TSL 1 (best) BASIC18.18■□□□□ 0.5
VGLL3A8MV65 TUBA4A-201ENST00000248437 2162 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
VGLL3A8MV65 CIZ1-226ENST00000629610 2855 ntAPPRIS ALT2 TSL 2 BASIC18.18■□□□□ 0.5
VGLL3A8MV65 MTFR1L-203ENST00000374303 2004 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
VGLL3A8MV65 ADGRB2-206ENST00000398556 4879 ntAPPRIS ALT2 TSL 5 BASIC18.18■□□□□ 0.5
VGLL3A8MV65 BEND4-202ENST00000504360 8692 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
VGLL3A8MV65 HECTD2-204ENST00000446394 4939 ntTSL 2 BASIC18.18■□□□□ 0.5
VGLL3A8MV65 EFR3B-203ENST00000402191 3685 ntTSL 5 BASIC18.18■□□□□ 0.5
VGLL3A8MV65 SPG21-202ENST00000416889 1533 ntTSL 2 BASIC18.18■□□□□ 0.5
VGLL3A8MV65 EPHA10-201ENST00000319637 2050 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
VGLL3A8MV65 PRMT9-201ENST00000322396 3528 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
VGLL3A8MV65 FGFR4-207ENST00000502906 2638 ntAPPRIS P4 TSL 1 (best) BASIC18.18■□□□□ 0.5
VGLL3A8MV65 TCP10-201ENST00000366827 2250 ntAPPRIS ALT2 TSL 5 BASIC18.18■□□□□ 0.5
VGLL3A8MV65 NPHP4-211ENST00000622020 3004 ntTSL 5 BASIC18.17■□□□□ 0.5
VGLL3A8MV65 ACSL1-205ENST00000504900 1583 ntTSL 5 BASIC18.17■□□□□ 0.5
VGLL3A8MV65 TMEM40-202ENST00000314124 2308 ntAPPRIS P3 TSL 2 BASIC18.17■□□□□ 0.5
VGLL3A8MV65 SLC35C1-202ENST00000442528 1756 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
VGLL3A8MV65 KDELR3-202ENST00000409006 931 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
VGLL3A8MV65 CHTF8-208ENST00000522091 863 ntTSL 2 BASIC18.17■□□□□ 0.5
VGLL3A8MV65 ARHGDIA-217ENST00000584461 886 ntTSL 2 BASIC18.17■□□□□ 0.5
VGLL3A8MV65 RPRD1A-207ENST00000588737 1264 ntTSL 2 BASIC18.17■□□□□ 0.5
VGLL3A8MV65 UBAP1L-203ENST00000559089 1694 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
VGLL3A8MV65 RALGPS1-203ENST00000373434 2466 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
VGLL3A8MV65 TJP3-207ENST00000589378 3068 ntAPPRIS ALT2 TSL 2 BASIC18.17■□□□□ 0.5
VGLL3A8MV65 CYB561D1-205ENST00000430195 5077 ntTSL 2 BASIC18.17■□□□□ 0.5
VGLL3A8MV65 MARCH1-203ENST00000503008 5877 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
VGLL3A8MV65 ZNF512B-201ENST00000369888 5919 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
VGLL3A8MV65 KIAA1841-201ENST00000295031 3116 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
VGLL3A8MV65 AANAT-201ENST00000250615 1913 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
Retrieved 100 of 98,524 protein–RNA pairs in 23.9 ms