Protein–RNA interactions for Protein: A6NNA2

SRRM3, Serine/arginine repetitive matrix protein 3, humanhuman

Predicted RBP Predictions only

Length 597 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SRRM3A6NNA2 SNHG7-203ENST00000436596 509 ntTSL 2 BASIC19.23■□□□□ 0.67
SRRM3A6NNA2 ARHGDIA-207ENST00000580685 1201 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
SRRM3A6NNA2 C16orf74-207ENST00000602914 761 ntAPPRIS ALT2 TSL 2 BASIC19.23■□□□□ 0.67
SRRM3A6NNA2 ZNF584-209ENST00000599238 2288 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
SRRM3A6NNA2 HOOK2-202ENST00000397668 2513 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
SRRM3A6NNA2 RARA-206ENST00000425707 3041 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
SRRM3A6NNA2 NPBWR1-201ENST00000331251 2687 ntAPPRIS P1 BASIC19.23■□□□□ 0.67
SRRM3A6NNA2 TRIM15-207ENST00000376694 2214 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
SRRM3A6NNA2 CYP21A1P-202ENST00000354927 1481 ntBASIC19.22■□□□□ 0.67
SRRM3A6NNA2 MAST1-208ENST00000591495 1496 ntTSL 5 BASIC19.22■□□□□ 0.67
SRRM3A6NNA2 AC124067.4-201ENST00000519691 2379 ntBASIC19.22■□□□□ 0.67
SRRM3A6NNA2 RNF222-201ENST00000344001 2786 ntAPPRIS P1 BASIC19.22■□□□□ 0.67
SRRM3A6NNA2 NAF1-202ENST00000422287 1604 ntAPPRIS ALT2 TSL 1 (best) BASIC19.22■□□□□ 0.67
SRRM3A6NNA2 ANKRD65-204ENST00000520296 1632 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
SRRM3A6NNA2 DENND1A-203ENST00000373624 5010 ntAPPRIS P4 TSL 5 BASIC19.22■□□□□ 0.67
SRRM3A6NNA2 ULK1-201ENST00000321867 5310 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
SRRM3A6NNA2 CSAD-209ENST00000453446 1774 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
SRRM3A6NNA2 WIPF1-206ENST00000409891 2568 ntAPPRIS ALT2 TSL 1 (best) BASIC19.22■□□□□ 0.67
SRRM3A6NNA2 CD72-201ENST00000259633 1548 ntAPPRIS P2 TSL 1 (best) BASIC19.22■□□□□ 0.67
SRRM3A6NNA2 TOR3A-203ENST00000367627 2724 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
SRRM3A6NNA2 PDE2A-226ENST00000544570 3119 ntTSL 5 BASIC19.22■□□□□ 0.67
SRRM3A6NNA2 POMZP3-201ENST00000275569 1259 ntTSL 2 BASIC19.22■□□□□ 0.67
SRRM3A6NNA2 LIN28AP1-201ENST00000429574 405 ntBASIC19.22■□□□□ 0.67
SRRM3A6NNA2 CCK-203ENST00000434608 747 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
SRRM3A6NNA2 C16orf91-201ENST00000442039 978 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
SRRM3A6NNA2 AC009947.2-201ENST00000444014 672 ntBASIC19.22■□□□□ 0.67
SRRM3A6NNA2 ABHD11-207ENST00000458339 890 ntTSL 3 BASIC19.22■□□□□ 0.67
SRRM3A6NNA2 AK2-204ENST00000467905 880 ntAPPRIS ALT1 TSL 2 BASIC19.22■□□□□ 0.67
SRRM3A6NNA2 ZNF575-205ENST00000601282 1086 ntAPPRIS P1 TSL 2 BASIC19.22■□□□□ 0.67
SRRM3A6NNA2 AC073195.1-201ENST00000607241 877 ntBASIC19.22■□□□□ 0.67
SRRM3A6NNA2 AC018445.1-201ENST00000621571 568 ntTSL 4 BASIC19.22■□□□□ 0.67
SRRM3A6NNA2 AC083906.6-201ENST00000641366 219 ntBASIC19.22■□□□□ 0.67
SRRM3A6NNA2 MARK1-202ENST00000366918 5169 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
SRRM3A6NNA2 MAP7-203ENST00000438100 2633 ntAPPRIS ALT2 TSL 2 BASIC19.22■□□□□ 0.67
SRRM3A6NNA2 ULK3-201ENST00000440863 2623 ntAPPRIS P3 TSL 2 BASIC19.22■□□□□ 0.67
SRRM3A6NNA2 PANX1-201ENST00000227638 2769 ntAPPRIS P2 TSL 1 (best) BASIC19.22■□□□□ 0.67
SRRM3A6NNA2 MTHFD2L-203ENST00000395759 2354 ntAPPRIS P2 TSL 5 BASIC19.22■□□□□ 0.67
SRRM3A6NNA2 GOLGA7-204ENST00000520817 1984 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
SRRM3A6NNA2 AC004982.2-201ENST00000609497 1578 ntTSL 2 BASIC19.22■□□□□ 0.67
SRRM3A6NNA2 GABRD-205ENST00000638771 1707 ntAPPRIS ALT2 TSL 3 BASIC19.22■□□□□ 0.67
SRRM3A6NNA2 MARC2-201ENST00000359316 1335 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
SRRM3A6NNA2 RTKN-203ENST00000305557 2646 ntAPPRIS P3 TSL 5 BASIC19.21■□□□□ 0.67
SRRM3A6NNA2 TNIP1-221ENST00000610874 2629 ntTSL 5 BASIC19.21■□□□□ 0.67
SRRM3A6NNA2 INTS11-209ENST00000450926 1839 ntTSL 5 BASIC19.21■□□□□ 0.67
SRRM3A6NNA2 PRKAR1B-204ENST00000406797 2553 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
SRRM3A6NNA2 XXYLT1-201ENST00000310380 2727 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
SRRM3A6NNA2 TMEM171-201ENST00000287773 1247 ntAPPRIS ALT1 TSL 5 BASIC19.21■□□□□ 0.67
SRRM3A6NNA2 MRGPRG-201ENST00000332314 870 ntAPPRIS P1 BASIC19.21■□□□□ 0.67
SRRM3A6NNA2 ZGPAT-202ENST00000355969 1871 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
SRRM3A6NNA2 MFSD14A-201ENST00000370152 2777 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
SRRM3A6NNA2 SCO2-202ENST00000395693 992 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
SRRM3A6NNA2 TTTY14-205ENST00000454875 544 ntTSL 2 BASIC19.21■□□□□ 0.67
SRRM3A6NNA2 EXOSC4-202ENST00000525936 606 ntTSL 3 BASIC19.21■□□□□ 0.67
SRRM3A6NNA2 LCE1C-202ENST00000607093 644 ntAPPRIS P2 BASIC19.21■□□□□ 0.67
SRRM3A6NNA2 PYCR1-216ENST00000619204 1904 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
SRRM3A6NNA2 CMPK2-201ENST00000256722 2884 ntAPPRIS P3 TSL 1 (best) BASIC19.21■□□□□ 0.67
SRRM3A6NNA2 ZNF302-201ENST00000423823 2590 ntAPPRIS P3 TSL 1 (best) BASIC19.21■□□□□ 0.67
SRRM3A6NNA2 TCP11-228ENST00000611141 2130 ntAPPRIS ALT2 TSL 1 (best) BASIC19.21■□□□□ 0.67
SRRM3A6NNA2 HDAC10-202ENST00000349505 1950 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
SRRM3A6NNA2 CFAP100-203ENST00000505024 1994 ntAPPRIS ALT2 TSL 1 (best) BASIC19.21■□□□□ 0.67
SRRM3A6NNA2 ZNF346-208ENST00000511834 2306 ntTSL 5 BASIC19.2■□□□□ 0.66
SRRM3A6NNA2 C2CD2L-205ENST00000528586 2320 ntTSL 2 BASIC19.2■□□□□ 0.66
SRRM3A6NNA2 B4GALT1-202ENST00000535206 1535 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
SRRM3A6NNA2 TMEM132A-201ENST00000005286 3480 ntAPPRIS P3 TSL 5 BASIC19.2■□□□□ 0.66
SRRM3A6NNA2 SPHK2-213ENST00000601712 1394 ntAPPRIS ALT2 TSL 5 BASIC19.2■□□□□ 0.66
SRRM3A6NNA2 WWC3-201ENST00000380861 6647 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
SRRM3A6NNA2 DENND2A-201ENST00000275884 3735 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
SRRM3A6NNA2 ETNK2-202ENST00000367201 2431 ntAPPRIS ALT2 TSL 2 BASIC19.2■□□□□ 0.66
SRRM3A6NNA2 RASSF1-201ENST00000327761 1757 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
SRRM3A6NNA2 ZFC3H1-206ENST00000548100 1771 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
SRRM3A6NNA2 TBC1D7-202ENST00000356436 1116 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
SRRM3A6NNA2 TBC1D7-204ENST00000379300 1276 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
SRRM3A6NNA2 PLEKHG5-207ENST00000400913 4698 ntAPPRIS P3 TSL 5 BASIC19.2■□□□□ 0.66
SRRM3A6NNA2 FITM1-202ENST00000559294 800 ntBASIC19.2■□□□□ 0.66
SRRM3A6NNA2 RBPJL-203ENST00000372743 1623 ntAPPRIS ALT1 TSL 1 (best) BASIC19.2■□□□□ 0.66
SRRM3A6NNA2 AIFM3-203ENST00000405089 2333 ntAPPRIS ALT1 TSL 2 BASIC19.2■□□□□ 0.66
SRRM3A6NNA2 FDXR-214ENST00000581530 1827 ntAPPRIS P3 TSL 1 (best) BASIC19.2■□□□□ 0.66
SRRM3A6NNA2 PTPRE-201ENST00000254667 5331 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
SRRM3A6NNA2 HPS3-202ENST00000460120 2745 ntTSL 2 BASIC19.2■□□□□ 0.66
SRRM3A6NNA2 SEPHS1-202ENST00000378614 2387 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
SRRM3A6NNA2 MICU3-201ENST00000318063 3992 ntAPPRIS P2 TSL 1 (best) BASIC19.2■□□□□ 0.66
SRRM3A6NNA2 SPTBN4-207ENST00000595535 6105 ntTSL 5 BASIC19.2■□□□□ 0.66
SRRM3A6NNA2 BMP2K-208ENST00000628286 3848 ntAPPRIS ALT2 TSL 5 BASIC19.2■□□□□ 0.66
SRRM3A6NNA2 CDK16-223ENST00000622098 2968 ntTSL 2 BASIC19.2■□□□□ 0.66
SRRM3A6NNA2 SOCS2-210ENST00000551556 1716 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
SRRM3A6NNA2 KSR1-201ENST00000268763 2806 ntAPPRIS ALT2 TSL 5 BASIC19.2■□□□□ 0.66
SRRM3A6NNA2 VEGFB-201ENST00000309422 1380 ntAPPRIS P3 TSL 1 (best) BASIC19.19■□□□□ 0.66
SRRM3A6NNA2 VPS26A-202ENST00000373382 3229 ntAPPRIS P1 TSL 5 BASIC19.19■□□□□ 0.66
SRRM3A6NNA2 IDUA-210ENST00000514224 2130 ntTSL 2 BASIC19.19■□□□□ 0.66
SRRM3A6NNA2 PSRC1-202ENST00000369904 1584 ntAPPRIS ALT2 TSL 1 (best) BASIC19.19■□□□□ 0.66
SRRM3A6NNA2 NFIX-202ENST00000360105 5459 ntTSL 5 BASIC19.19■□□□□ 0.66
SRRM3A6NNA2 POU5F1-201ENST00000259915 1420 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
SRRM3A6NNA2 SNX27-204ENST00000458013 6403 ntAPPRIS ALT1 TSL 5 BASIC19.19■□□□□ 0.66
SRRM3A6NNA2 SQSTM1-202ENST00000389805 2986 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
SRRM3A6NNA2 CARNS1-205ENST00000531040 2968 ntTSL 5 BASIC19.19■□□□□ 0.66
SRRM3A6NNA2 RGS14-201ENST00000408923 2415 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
SRRM3A6NNA2 PMS1-206ENST00000418224 3018 ntTSL 5 BASIC19.19■□□□□ 0.66
SRRM3A6NNA2 RHEBL1-201ENST00000301068 1210 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
SRRM3A6NNA2 ATP5G1P1-201ENST00000448724 379 ntBASIC19.19■□□□□ 0.66
SRRM3A6NNA2 KRT16P5-201ENST00000455284 522 ntBASIC19.19■□□□□ 0.66
Retrieved 100 of 98,524 protein–RNA pairs in 25.7 ms