Protein–RNA interactions for Protein: A6NHL2

TUBAL3, Tubulin alpha chain-like 3, humanhuman

Predictions only

Length 446 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TUBAL3A6NHL2 PCDHA2-203ENST00000526136 5254 ntAPPRIS P2 TSL 1 (best) BASIC16.67■□□□□ 0.26
TUBAL3A6NHL2 ABCG4-206ENST00000622721 2553 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
TUBAL3A6NHL2 VLDLR-AS1-205ENST00000599229 1346 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
TUBAL3A6NHL2 SNAP91-211ENST00000520213 2168 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
TUBAL3A6NHL2 JPT1-203ENST00000409753 1605 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
TUBAL3A6NHL2 POLR3E-209ENST00000564209 2464 ntTSL 2 BASIC16.67■□□□□ 0.26
TUBAL3A6NHL2 IL17RC-201ENST00000295981 2621 ntAPPRIS P4 TSL 2 BASIC16.66■□□□□ 0.26
TUBAL3A6NHL2 GTF3C5-201ENST00000342018 1905 ntTSL 5 BASIC16.66■□□□□ 0.26
TUBAL3A6NHL2 GTF2IRD2B-210ENST00000629105 1910 ntTSL 5 BASIC16.66■□□□□ 0.26
TUBAL3A6NHL2 ZNF200-202ENST00000396870 2373 ntAPPRIS ALT2 TSL 1 (best) BASIC16.66■□□□□ 0.26
TUBAL3A6NHL2 CDKN1B-201ENST00000228872 2657 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
TUBAL3A6NHL2 PRKCB-202ENST00000321728 2689 ntAPPRIS ALT1 TSL 1 (best) BASIC16.66■□□□□ 0.26
TUBAL3A6NHL2 CAMKK1-202ENST00000348335 3563 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
TUBAL3A6NHL2 COMP-202ENST00000425807 2292 ntTSL 2 BASIC16.66■□□□□ 0.26
TUBAL3A6NHL2 CADPS2-202ENST00000334010 6045 ntAPPRIS ALT2 TSL 5 BASIC16.66■□□□□ 0.26
TUBAL3A6NHL2 MPG-201ENST00000219431 1193 ntAPPRIS P4 TSL 3 BASIC16.66■□□□□ 0.26
TUBAL3A6NHL2 FAM57A-201ENST00000301324 2013 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
TUBAL3A6NHL2 DHRS4-201ENST00000313250 1443 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
TUBAL3A6NHL2 SCO2-202ENST00000395693 992 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
TUBAL3A6NHL2 LINC01819-201ENST00000422351 2156 ntTSL 5 BASIC16.66■□□□□ 0.26
TUBAL3A6NHL2 UBE2E1-AS1-201ENST00000426702 778 ntTSL 3 BASIC16.66■□□□□ 0.26
TUBAL3A6NHL2 APBB3-216ENST00000511201 1014 ntTSL 5 BASIC16.66■□□□□ 0.26
TUBAL3A6NHL2 TMEM41B-203ENST00000527813 803 ntTSL 5 BASIC16.66■□□□□ 0.26
TUBAL3A6NHL2 C17orf49-208ENST00000552402 760 ntTSL 2 BASIC16.66■□□□□ 0.26
TUBAL3A6NHL2 FAM104A-205ENST00000581110 512 ntTSL 2 BASIC16.66■□□□□ 0.26
TUBAL3A6NHL2 AC093458.2-201ENST00000623150 629 ntBASIC16.66■□□□□ 0.26
TUBAL3A6NHL2 TLK2-203ENST00000346027 3449 ntAPPRIS P3 TSL 1 (best) BASIC16.66■□□□□ 0.26
TUBAL3A6NHL2 DOK2-201ENST00000276420 1936 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
TUBAL3A6NHL2 CIRBP-201ENST00000320936 1328 ntAPPRIS P3 TSL 1 (best) BASIC16.66■□□□□ 0.26
TUBAL3A6NHL2 PEX16-202ENST00000378750 1335 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
TUBAL3A6NHL2 CIRBP-207ENST00000586472 1303 ntAPPRIS P3 TSL 3 BASIC16.66■□□□□ 0.26
TUBAL3A6NHL2 UBE2F-205ENST00000414443 2100 ntTSL 2 BASIC16.66■□□□□ 0.26
TUBAL3A6NHL2 MYEOV-202ENST00000441339 1996 ntAPPRIS P3 TSL 2 BASIC16.66■□□□□ 0.26
TUBAL3A6NHL2 ELAC2-202ENST00000395962 2924 ntTSL 2 BASIC16.66■□□□□ 0.26
TUBAL3A6NHL2 FAM117B-201ENST00000392238 5763 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
TUBAL3A6NHL2 ST3GAL4-205ENST00000449406 1669 ntTSL 5 BASIC16.65■□□□□ 0.26
TUBAL3A6NHL2 AC124066.1-201ENST00000581122 1660 ntTSL 5 BASIC16.65■□□□□ 0.26
TUBAL3A6NHL2 UBE3C-201ENST00000348165 5229 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
TUBAL3A6NHL2 WNT5B-201ENST00000310594 2184 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
TUBAL3A6NHL2 FAM228B-210ENST00000615575 1357 ntAPPRIS P3 TSL 5 BASIC16.65■□□□□ 0.26
TUBAL3A6NHL2 ZDHHC3-205ENST00000424952 2687 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
TUBAL3A6NHL2 DEDD2-204ENST00000595337 1894 ntAPPRIS P3 TSL 3 BASIC16.65■□□□□ 0.26
TUBAL3A6NHL2 WIPF2-202ENST00000394103 2378 ntAPPRIS ALT2 TSL 5 BASIC16.65■□□□□ 0.26
TUBAL3A6NHL2 PML-204ENST00000359928 1726 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
TUBAL3A6NHL2 DNAJC11-201ENST00000294401 2210 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
TUBAL3A6NHL2 ZNF446-203ENST00000594369 2238 ntAPPRIS P2 TSL 1 (best) BASIC16.65■□□□□ 0.26
TUBAL3A6NHL2 AC127496.1-202ENST00000573602 2091 ntTSL 2 BASIC16.65■□□□□ 0.26
TUBAL3A6NHL2 GABBR1-204ENST00000377016 4299 ntTSL 5 BASIC16.65■□□□□ 0.26
TUBAL3A6NHL2 HNRNPLL-202ENST00000358367 2779 ntTSL 5 BASIC16.65■□□□□ 0.26
TUBAL3A6NHL2 ULK3-220ENST00000569437 2611 ntAPPRIS ALT1 TSL 1 (best) BASIC16.65■□□□□ 0.26
TUBAL3A6NHL2 SMIM19-202ENST00000416469 691 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
TUBAL3A6NHL2 CCNJL-205ENST00000519673 940 ntTSL 2 BASIC16.65■□□□□ 0.26
TUBAL3A6NHL2 AC004080.2-201ENST00000523331 556 ntTSL 4 BASIC16.65■□□□□ 0.26
TUBAL3A6NHL2 GPHA2-202ENST00000532246 466 ntTSL 3 BASIC16.65■□□□□ 0.26
TUBAL3A6NHL2 AC022509.3-202ENST00000545819 566 ntTSL 3 BASIC16.65■□□□□ 0.26
TUBAL3A6NHL2 AL133352.1-203ENST00000557395 1234 ntAPPRIS P5 TSL 2 BASIC16.65■□□□□ 0.26
TUBAL3A6NHL2 MTHFS-202ENST00000559722 948 ntTSL 2 BASIC16.65■□□□□ 0.26
TUBAL3A6NHL2 NEK4P2-201ENST00000580004 1012 ntBASIC16.65■□□□□ 0.26
TUBAL3A6NHL2 SNAP47-201ENST00000315781 2367 ntAPPRIS P3 TSL 1 (best) BASIC16.65■□□□□ 0.26
TUBAL3A6NHL2 TEX13A-202ENST00000609007 1349 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
TUBAL3A6NHL2 PHB2-203ENST00000535923 1515 ntAPPRIS P2 TSL 5 BASIC16.65■□□□□ 0.26
TUBAL3A6NHL2 ADAD1-202ENST00000388724 1912 ntTSL 1 (best) BASIC16.64■□□□□ 0.26
TUBAL3A6NHL2 EIF2B1-201ENST00000424014 2477 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.26
TUBAL3A6NHL2 PABPC1L-204ENST00000255136 2129 ntAPPRIS P1 TSL 5 BASIC16.64■□□□□ 0.25
TUBAL3A6NHL2 DUT-201ENST00000331200 2147 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
TUBAL3A6NHL2 RBM14-RBM4-201ENST00000412278 1566 ntAPPRIS P1 TSL 2 BASIC16.64■□□□□ 0.25
TUBAL3A6NHL2 KIF1BP-204ENST00000626493 2337 ntTSL 5 BASIC16.64■□□□□ 0.25
TUBAL3A6NHL2 PRR5-ARHGAP8-201ENST00000352766 2043 ntAPPRIS P1 TSL 2 BASIC16.64■□□□□ 0.25
TUBAL3A6NHL2 APTR-204ENST00000440088 2029 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
TUBAL3A6NHL2 AL133373.2-201ENST00000623187 2828 ntBASIC16.64■□□□□ 0.25
TUBAL3A6NHL2 UPK3B-201ENST00000257632 1296 ntAPPRIS P5 TSL 2 BASIC16.64■□□□□ 0.25
TUBAL3A6NHL2 TMEM171-201ENST00000287773 1247 ntAPPRIS ALT1 TSL 5 BASIC16.64■□□□□ 0.25
TUBAL3A6NHL2 MED30-201ENST00000297347 985 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
TUBAL3A6NHL2 TSPAN14-202ENST00000341863 1037 ntTSL 5 BASIC16.64■□□□□ 0.25
TUBAL3A6NHL2 AP002433.1-201ENST00000525548 964 ntTSL 3 BASIC16.64■□□□□ 0.25
TUBAL3A6NHL2 AC239803.1-201ENST00000594189 1278 ntTSL 5 BASIC16.64■□□□□ 0.25
TUBAL3A6NHL2 DHRS2-210ENST00000611765 1287 ntAPPRIS ALT2 TSL 2 BASIC16.64■□□□□ 0.25
TUBAL3A6NHL2 MORF4L1-215ENST00000559345 1468 ntTSL 2 BASIC16.64■□□□□ 0.25
TUBAL3A6NHL2 SLC9A6-202ENST00000370698 4631 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
TUBAL3A6NHL2 CDH23-212ENST00000616684 4814 ntTSL 5 BASIC16.64■□□□□ 0.25
TUBAL3A6NHL2 CCM2-202ENST00000381112 1881 ntAPPRIS ALT2 TSL 2 BASIC16.64■□□□□ 0.25
TUBAL3A6NHL2 THAP12-201ENST00000260045 3300 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
TUBAL3A6NHL2 RSAD1-201ENST00000258955 2528 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
TUBAL3A6NHL2 AC107959.1-202ENST00000502083 1945 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
TUBAL3A6NHL2 RTN1-202ENST00000342503 1703 ntAPPRIS ALT1 TSL 1 (best) BASIC16.64■□□□□ 0.25
TUBAL3A6NHL2 CXorf49-202ENST00000535490 1715 ntAPPRIS P1 TSL 5 BASIC16.64■□□□□ 0.25
TUBAL3A6NHL2 CXorf49B-202ENST00000542739 1715 ntAPPRIS P1 TSL 5 BASIC16.64■□□□□ 0.25
TUBAL3A6NHL2 CD151-201ENST00000322008 1548 ntAPPRIS P2 TSL 1 (best) BASIC16.64■□□□□ 0.25
TUBAL3A6NHL2 CYSTM1-201ENST00000261811 1336 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
TUBAL3A6NHL2 GXYLT1-202ENST00000398675 7497 ntAPPRIS P4 TSL 1 (best) BASIC16.64■□□□□ 0.25
TUBAL3A6NHL2 SEPT8-216ENST00000620483 4335 ntTSL 5 BASIC16.64■□□□□ 0.25
TUBAL3A6NHL2 FZD10-202ENST00000539839 3282 ntBASIC16.64■□□□□ 0.25
TUBAL3A6NHL2 FAM213A-206ENST00000615554 2213 ntAPPRIS P1 TSL 5 BASIC16.64■□□□□ 0.25
TUBAL3A6NHL2 POMT2-201ENST00000261534 4876 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
TUBAL3A6NHL2 PALM3-201ENST00000340790 2262 ntAPPRIS P2 TSL 5 BASIC16.63■□□□□ 0.25
TUBAL3A6NHL2 CNOT9-209ENST00000627282 1621 ntTSL 2 BASIC16.63■□□□□ 0.25
TUBAL3A6NHL2 EFCAB11-202ENST00000538485 1870 ntTSL 2 BASIC16.63■□□□□ 0.25
TUBAL3A6NHL2 RIN1-205ENST00000530056 2122 ntTSL 2 BASIC16.63■□□□□ 0.25
TUBAL3A6NHL2 RRN3-205ENST00000563559 2128 ntTSL 5 BASIC16.63■□□□□ 0.25
TUBAL3A6NHL2 CACNA1A-247ENST00000637769 8648 ntAPPRIS ALT2 TSL 1 (best) BASIC16.63■□□□□ 0.25
Retrieved 100 of 98,524 protein–RNA pairs in 16.5 ms