Protein–RNA interactions for Protein: A5YKK6

CNOT1, CCR4-NOT transcription complex subunit 1, humanhuman

Known RBP Predictions only

Length 2,376 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT1A5YKK6 SFT2D1-201ENST00000361731 1079 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
CNOT1A5YKK6 ATP5G3-202ENST00000392541 842 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
CNOT1A5YKK6 LINC00899-202ENST00000444890 493 ntTSL 3 BASIC17.68■□□□□ 0.42
CNOT1A5YKK6 TSPAN4-214ENST00000525201 834 ntTSL 5 BASIC17.68■□□□□ 0.42
CNOT1A5YKK6 LINC00668-203ENST00000579012 605 ntTSL 3 BASIC17.68■□□□□ 0.42
CNOT1A5YKK6 PDLIM3-202ENST00000284770 1766 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
CNOT1A5YKK6 TMEM104-202ENST00000417024 1781 ntTSL 2 BASIC17.68■□□□□ 0.42
CNOT1A5YKK6 STN1-201ENST00000224950 1417 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
CNOT1A5YKK6 TCP11-204ENST00000373979 1882 ntAPPRIS P3 TSL 5 BASIC17.68■□□□□ 0.42
CNOT1A5YKK6 PAQR6-215ENST00000623241 1961 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
CNOT1A5YKK6 RBM14-RBM4-201ENST00000412278 1566 ntAPPRIS P1 TSL 2 BASIC17.67■□□□□ 0.42
CNOT1A5YKK6 CCNL2-202ENST00000408918 1186 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
CNOT1A5YKK6 ATP6V0CP3-201ENST00000417255 467 ntBASIC17.67■□□□□ 0.42
CNOT1A5YKK6 AC093585.1-201ENST00000425183 428 ntTSL 2 BASIC17.67■□□□□ 0.42
CNOT1A5YKK6 LINC02123-201ENST00000514869 885 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
CNOT1A5YKK6 CHMP1A-208ENST00000550102 803 ntTSL 5 BASIC17.67■□□□□ 0.42
CNOT1A5YKK6 AC004130.1-202ENST00000603156 666 ntTSL 2 BASIC17.67■□□□□ 0.42
CNOT1A5YKK6 SLC35D3-201ENST00000331858 2359 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
CNOT1A5YKK6 HTD2-206ENST00000481972 1378 ntAPPRIS P1 TSL 2 BASIC17.67■□□□□ 0.42
CNOT1A5YKK6 NF2-201ENST00000334961 2020 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
CNOT1A5YKK6 CYP51A1P1-201ENST00000492267 1507 ntBASIC17.67■□□□□ 0.42
CNOT1A5YKK6 IGF2-207ENST00000434045 1583 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
CNOT1A5YKK6 SLC22A17-202ENST00000354772 2238 ntAPPRIS ALT2 TSL 1 (best) BASIC17.67■□□□□ 0.42
CNOT1A5YKK6 UBL4A-202ENST00000369660 2382 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
CNOT1A5YKK6 ECE2-203ENST00000359140 3147 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
CNOT1A5YKK6 ASAP2-201ENST00000281419 5712 ntAPPRIS P3 TSL 1 (best) BASIC17.67■□□□□ 0.42
CNOT1A5YKK6 DHRS12-201ENST00000218981 1970 ntTSL 2 BASIC17.67■□□□□ 0.42
CNOT1A5YKK6 RPS2P28-201ENST00000314255 741 ntBASIC17.67■□□□□ 0.42
CNOT1A5YKK6 ETNK1-202ENST00000335148 1083 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
CNOT1A5YKK6 WDR53-203ENST00000429115 683 ntTSL 2 BASIC17.67■□□□□ 0.42
CNOT1A5YKK6 COX20P2-201ENST00000452636 358 ntBASIC17.67■□□□□ 0.42
CNOT1A5YKK6 PYCR1-207ENST00000577756 1144 ntTSL 2 BASIC17.67■□□□□ 0.42
CNOT1A5YKK6 RAB34-226ENST00000636772 1180 ntTSL 5 BASIC17.67■□□□□ 0.42
CNOT1A5YKK6 WDSUB1-202ENST00000359774 1912 ntAPPRIS P1 TSL 5 BASIC17.66■□□□□ 0.42
CNOT1A5YKK6 HHIPL1-202ENST00000357223 2241 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
CNOT1A5YKK6 SOX12-201ENST00000342665 4630 ntAPPRIS P1 BASIC17.66■□□□□ 0.42
CNOT1A5YKK6 FIGLA-201ENST00000332372 722 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
CNOT1A5YKK6 TMEM179B-201ENST00000333449 1023 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
CNOT1A5YKK6 GUK1-210ENST00000391865 990 ntAPPRIS ALT1 TSL 1 (best) BASIC17.66■□□□□ 0.42
CNOT1A5YKK6 MSRA-206ENST00000521209 814 ntTSL 3 BASIC17.66■□□□□ 0.42
CNOT1A5YKK6 COPE-211ENST00000600932 1144 ntTSL 5 BASIC17.66■□□□□ 0.42
CNOT1A5YKK6 AL356309.3-201ENST00000624132 1934 ntBASIC17.66■□□□□ 0.42
CNOT1A5YKK6 SRSF4-201ENST00000373795 2387 ntAPPRIS P2 TSL 1 (best) BASIC17.66■□□□□ 0.42
CNOT1A5YKK6 HS3ST4-201ENST00000331351 3203 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
CNOT1A5YKK6 FAM102B-201ENST00000370035 5600 ntAPPRIS P2 TSL 1 (best) BASIC17.66■□□□□ 0.42
CNOT1A5YKK6 PCDHAC2-203ENST00000615316 3011 ntBASIC17.66■□□□□ 0.42
CNOT1A5YKK6 KCNQ5-213ENST00000629977 2830 ntAPPRIS ALT2 TSL 1 (best) BASIC17.66■□□□□ 0.42
CNOT1A5YKK6 GRAMD1A-201ENST00000317991 2695 ntAPPRIS P3 TSL 1 (best) BASIC17.66■□□□□ 0.42
CNOT1A5YKK6 TAF7-201ENST00000313368 2334 ntAPPRIS P1 BASIC17.66■□□□□ 0.42
CNOT1A5YKK6 KLRG2-201ENST00000340940 2197 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
CNOT1A5YKK6 ORAI1-202ENST00000617316 2138 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
CNOT1A5YKK6 TOR1A-201ENST00000351698 2076 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
CNOT1A5YKK6 DOK2-201ENST00000276420 1936 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
CNOT1A5YKK6 RAB5C-202ENST00000393860 1912 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
CNOT1A5YKK6 NECTIN3-211ENST00000493615 1876 ntAPPRIS ALT2 TSL 2 BASIC17.66■□□□□ 0.42
CNOT1A5YKK6 TMEM25-225ENST00000533102 1410 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
CNOT1A5YKK6 SCAND1-203ENST00000615116 1371 ntAPPRIS P1 TSL 5 BASIC17.66■□□□□ 0.42
CNOT1A5YKK6 KNOP1-205ENST00000568230 1311 ntAPPRIS ALT2 TSL 5 BASIC17.66■□□□□ 0.42
CNOT1A5YKK6 TOR3A-201ENST00000352445 1182 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
CNOT1A5YKK6 XXYLT1-204ENST00000429994 865 ntTSL 3 BASIC17.66■□□□□ 0.42
CNOT1A5YKK6 LHX6-205ENST00000464484 666 ntTSL 2 BASIC17.66■□□□□ 0.42
CNOT1A5YKK6 MRFAP1-203ENST00000507420 563 ntAPPRIS P1 TSL 4 BASIC17.66■□□□□ 0.42
CNOT1A5YKK6 AC105339.3-201ENST00000560043 636 ntBASIC17.66■□□□□ 0.42
CNOT1A5YKK6 ICAM2-205ENST00000578379 1064 ntTSL 5 BASIC17.66■□□□□ 0.42
CNOT1A5YKK6 ICAM2-206ENST00000578892 1056 ntTSL 3 BASIC17.66■□□□□ 0.42
CNOT1A5YKK6 NAT14-202ENST00000587400 416 ntTSL 5 BASIC17.66■□□□□ 0.42
CNOT1A5YKK6 WNT7B-204ENST00000410089 2202 ntTSL 5 BASIC17.65■□□□□ 0.42
CNOT1A5YKK6 GNA12-201ENST00000275364 4378 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
CNOT1A5YKK6 NPR3-203ENST00000415167 1753 ntAPPRIS P3 TSL 1 (best) BASIC17.65■□□□□ 0.42
CNOT1A5YKK6 AL162377.1-201ENST00000618844 1793 ntBASIC17.65■□□□□ 0.42
CNOT1A5YKK6 ABHD14B-202ENST00000361143 1636 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
CNOT1A5YKK6 PSMD8-201ENST00000215071 1553 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
CNOT1A5YKK6 DBNL-213ENST00000452943 1513 ntTSL 2 BASIC17.65■□□□□ 0.42
CNOT1A5YKK6 HTD2-201ENST00000461393 1508 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
CNOT1A5YKK6 LCA10-201ENST00000618311 1392 ntTSL 2 BASIC17.65■□□□□ 0.42
CNOT1A5YKK6 PDCD2L-201ENST00000246535 1171 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
CNOT1A5YKK6 DUSP15-204ENST00000398083 1212 ntTSL 5 BASIC17.65■□□□□ 0.42
CNOT1A5YKK6 LINC02387-201ENST00000541749 868 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
CNOT1A5YKK6 AC106028.4-201ENST00000614509 607 ntBASIC17.65■□□□□ 0.42
CNOT1A5YKK6 AL139288.1-201ENST00000623748 933 ntBASIC17.65■□□□□ 0.42
CNOT1A5YKK6 EBLN3P-205ENST00000629870 958 ntTSL 3 BASIC17.65■□□□□ 0.42
CNOT1A5YKK6 TOP2B-204ENST00000435706 5389 ntAPPRIS P3 TSL 1 (best) BASIC17.65■□□□□ 0.42
CNOT1A5YKK6 TMEM128-201ENST00000254742 1737 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
CNOT1A5YKK6 EARS2-206ENST00000563232 1709 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
CNOT1A5YKK6 ACBD6-201ENST00000367595 1670 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
CNOT1A5YKK6 AKT2-206ENST00000392038 5300 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
CNOT1A5YKK6 ACTL6A-201ENST00000392662 1899 ntTSL 2 BASIC17.65■□□□□ 0.42
CNOT1A5YKK6 FIP1L1-207ENST00000507922 1335 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
CNOT1A5YKK6 DHRS7-212ENST00000611054 1321 ntTSL 5 BASIC17.65■□□□□ 0.42
CNOT1A5YKK6 IGLL1-202ENST00000330377 901 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
CNOT1A5YKK6 C6orf226-201ENST00000408925 552 ntAPPRIS P1 BASIC17.65■□□□□ 0.42
CNOT1A5YKK6 AL121672.1-201ENST00000439423 1181 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
CNOT1A5YKK6 AL589182.1-202ENST00000548416 533 ntTSL 4 BASIC17.65■□□□□ 0.42
CNOT1A5YKK6 GRTP1-205ENST00000620217 1073 ntTSL 2 BASIC17.65■□□□□ 0.42
CNOT1A5YKK6 LCK-214ENST00000619559 2099 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.42
CNOT1A5YKK6 EXOSC6-201ENST00000435634 5153 ntAPPRIS P1 BASIC17.64■□□□□ 0.42
CNOT1A5YKK6 MATN4-204ENST00000372756 2077 ntAPPRIS P2 TSL 1 (best) BASIC17.64■□□□□ 0.41
CNOT1A5YKK6 RCN1P2-201ENST00000398357 915 ntBASIC17.64■□□□□ 0.41
CNOT1A5YKK6 SLC26A4-AS1-202ENST00000449741 586 ntTSL 4 BASIC17.64■□□□□ 0.41
CNOT1A5YKK6 CHRNA5-203ENST00000559554 1051 ntTSL 3 BASIC17.64■□□□□ 0.41
Retrieved 100 of 98,524 protein–RNA pairs in 29.9 ms