Protein–RNA interactions for Protein: A2A3K4

PTPDC1, Protein tyrosine phosphatase domain-containing protein 1, humanhuman

Predictions only

Length 754 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTPDC1A2A3K4 CHD1L-204ENST00000431239 2907 ntTSL 5 BASIC21.83■■□□□ 1.09
PTPDC1A2A3K4 SNHG10-201ENST00000500370 1531 ntTSL 2 BASIC21.83■■□□□ 1.09
PTPDC1A2A3K4 CHRND-201ENST00000258385 2112 ntAPPRIS P1 TSL 1 (best) BASIC21.83■■□□□ 1.08
PTPDC1A2A3K4 PHKA1-204ENST00000373545 6173 ntTSL 5 BASIC21.83■■□□□ 1.08
PTPDC1A2A3K4 RPS6KB1-204ENST00000443572 1913 ntTSL 2 BASIC21.82■■□□□ 1.08
PTPDC1A2A3K4 CRHR2-207ENST00000471646 2530 ntAPPRIS P1 TSL 1 (best) BASIC21.82■■□□□ 1.08
PTPDC1A2A3K4 KRT8P45-201ENST00000414328 1447 ntBASIC21.82■■□□□ 1.08
PTPDC1A2A3K4 BEGAIN-202ENST00000443071 2744 ntTSL 1 (best) BASIC21.82■■□□□ 1.08
PTPDC1A2A3K4 GPR75-201ENST00000394705 2115 ntAPPRIS P1 TSL 1 (best) BASIC21.82■■□□□ 1.08
PTPDC1A2A3K4 KRBOX1-AS1-201ENST00000447834 2134 ntTSL 2 BASIC21.82■■□□□ 1.08
PTPDC1A2A3K4 NPNT-203ENST00000427316 2481 ntAPPRIS ALT2 TSL 2 BASIC21.82■■□□□ 1.08
PTPDC1A2A3K4 MATN4-203ENST00000372754 2200 ntAPPRIS ALT2 TSL 5 BASIC21.82■■□□□ 1.08
PTPDC1A2A3K4 TESMIN-201ENST00000255087 2579 ntAPPRIS P1 TSL 1 (best) BASIC21.82■■□□□ 1.08
PTPDC1A2A3K4 BRMS1L-201ENST00000216807 2657 ntAPPRIS P1 TSL 1 (best) BASIC21.82■■□□□ 1.08
PTPDC1A2A3K4 OCIAD2-201ENST00000273860 636 ntTSL 1 (best) BASIC21.82■■□□□ 1.08
PTPDC1A2A3K4 CFL1-201ENST00000308162 1234 ntAPPRIS P1 TSL 1 (best) BASIC21.82■■□□□ 1.08
PTPDC1A2A3K4 ROMO1-202ENST00000374072 350 ntTSL 5 BASIC21.82■■□□□ 1.08
PTPDC1A2A3K4 TSPY5P-201ENST00000426936 936 ntBASIC21.82■■□□□ 1.08
PTPDC1A2A3K4 MUC1-212ENST00000457295 1161 ntAPPRIS ALT2 TSL 2 BASIC21.82■■□□□ 1.08
PTPDC1A2A3K4 NDUFV2-207ENST00000497577 868 ntTSL 2 BASIC21.82■■□□□ 1.08
PTPDC1A2A3K4 IGHMBP2-205ENST00000539224 785 ntTSL 3 BASIC21.82■■□□□ 1.08
PTPDC1A2A3K4 OCIAD2-210ENST00000620187 697 ntTSL 3 BASIC21.82■■□□□ 1.08
PTPDC1A2A3K4 SMPD1-203ENST00000527275 2188 ntAPPRIS P3 TSL 2 BASIC21.82■■□□□ 1.08
PTPDC1A2A3K4 HOXC10-201ENST00000303460 1936 ntAPPRIS P1 TSL 1 (best) BASIC21.82■■□□□ 1.08
PTPDC1A2A3K4 SAMD11-210ENST00000616016 2391 ntTSL 5 BASIC21.82■■□□□ 1.08
PTPDC1A2A3K4 SAMD11-215ENST00000618779 2368 ntAPPRIS ALT2 TSL 5 BASIC21.82■■□□□ 1.08
PTPDC1A2A3K4 ST3GAL3-201ENST00000262915 2470 ntTSL 5 BASIC21.82■■□□□ 1.08
PTPDC1A2A3K4 CHPF-201ENST00000243776 3013 ntAPPRIS P1 TSL 1 (best) BASIC21.82■■□□□ 1.08
PTPDC1A2A3K4 NAPRT-202ENST00000426292 1654 ntTSL 1 (best) BASIC21.82■■□□□ 1.08
PTPDC1A2A3K4 PIF1-205ENST00000559239 2677 ntAPPRIS P1 TSL 1 (best) BASIC21.82■■□□□ 1.08
PTPDC1A2A3K4 MTMR12-201ENST00000264934 2215 ntTSL 2 BASIC21.82■■□□□ 1.08
PTPDC1A2A3K4 AKAP17A-201ENST00000313871 3204 ntAPPRIS P2 TSL 1 (best) BASIC21.82■■□□□ 1.08
PTPDC1A2A3K4 ZNF668-208ENST00000538906 2865 ntAPPRIS P1 TSL 2 BASIC21.81■■□□□ 1.08
PTPDC1A2A3K4 AC096719.1-201ENST00000510705 1874 ntTSL 5 BASIC21.81■■□□□ 1.08
PTPDC1A2A3K4 FAM222A-202ENST00000538780 3294 ntAPPRIS P1 TSL 1 (best) BASIC21.81■■□□□ 1.08
PTPDC1A2A3K4 CXorf40A-208ENST00000434353 1524 ntAPPRIS ALT1 TSL 5 BASIC21.81■■□□□ 1.08
PTPDC1A2A3K4 C22orf39-205ENST00000542103 1523 ntTSL 1 (best) BASIC21.81■■□□□ 1.08
PTPDC1A2A3K4 COMP-202ENST00000425807 2292 ntTSL 2 BASIC21.81■■□□□ 1.08
PTPDC1A2A3K4 C16orf58-202ENST00000430477 2471 ntAPPRIS P2 TSL 1 (best) BASIC21.81■■□□□ 1.08
PTPDC1A2A3K4 CHTOP-207ENST00000614256 1840 ntTSL 3 BASIC21.81■■□□□ 1.08
PTPDC1A2A3K4 RAPH1-201ENST00000308091 2768 ntAPPRIS ALT2 TSL 1 (best) BASIC21.81■■□□□ 1.08
PTPDC1A2A3K4 NARFL-201ENST00000251588 2112 ntAPPRIS P1 TSL 1 (best) BASIC21.81■■□□□ 1.08
PTPDC1A2A3K4 TCAP-201ENST00000309889 2123 ntAPPRIS P1 TSL 1 (best) BASIC21.81■■□□□ 1.08
PTPDC1A2A3K4 PIEZO1-202ENST00000327397 1246 ntTSL 2 BASIC21.81■■□□□ 1.08
PTPDC1A2A3K4 ANKRD20A18P-201ENST00000359341 492 ntBASIC21.81■■□□□ 1.08
PTPDC1A2A3K4 PBXIP1-201ENST00000368460 1175 ntAPPRIS ALT2 TSL 3 BASIC21.81■■□□□ 1.08
PTPDC1A2A3K4 AC092647.4-201ENST00000457211 535 ntBASIC21.81■■□□□ 1.08
PTPDC1A2A3K4 LINC01385-201ENST00000512310 780 ntTSL 4 BASIC21.81■■□□□ 1.08
PTPDC1A2A3K4 DIO1-206ENST00000525202 558 ntTSL 1 (best) BASIC21.81■■□□□ 1.08
PTPDC1A2A3K4 DCTN5-208ENST00000568589 772 ntTSL 2 BASIC21.81■■□□□ 1.08
PTPDC1A2A3K4 EEF2KMT-206ENST00000587133 873 ntAPPRIS ALT2 TSL 3 BASIC21.81■■□□□ 1.08
PTPDC1A2A3K4 GEMIN7-203ENST00000591607 848 ntAPPRIS P1 TSL 3 BASIC21.81■■□□□ 1.08
PTPDC1A2A3K4 C16orf74-207ENST00000602914 761 ntAPPRIS ALT2 TSL 2 BASIC21.81■■□□□ 1.08
PTPDC1A2A3K4 AC011558.1-201ENST00000623459 338 ntBASIC21.81■■□□□ 1.08
PTPDC1A2A3K4 SREBF2-209ENST00000612482 5365 ntTSL 5 BASIC21.81■■□□□ 1.08
PTPDC1A2A3K4 MED25-212ENST00000618715 1467 ntTSL 5 BASIC21.81■■□□□ 1.08
PTPDC1A2A3K4 SETMAR-206ENST00000430981 1671 ntTSL 1 (best) BASIC21.81■■□□□ 1.08
PTPDC1A2A3K4 SERPINA4-201ENST00000298841 1784 ntAPPRIS P1 TSL 1 (best) BASIC21.81■■□□□ 1.08
PTPDC1A2A3K4 TMEM104-202ENST00000417024 1781 ntTSL 2 BASIC21.81■■□□□ 1.08
PTPDC1A2A3K4 MAPK9-201ENST00000343111 4369 ntTSL 5 BASIC21.81■■□□□ 1.08
PTPDC1A2A3K4 RELL2-202ENST00000444782 2154 ntAPPRIS P1 TSL 1 (best) BASIC21.81■■□□□ 1.08
PTPDC1A2A3K4 TMEM206-201ENST00000261455 2475 ntAPPRIS P1 TSL 1 (best) BASIC21.81■■□□□ 1.08
PTPDC1A2A3K4 GMDS-208ENST00000530927 1440 ntAPPRIS ALT2 TSL 1 (best) BASIC21.8■■□□□ 1.08
PTPDC1A2A3K4 AL365232.1-201ENST00000423730 1636 ntAPPRIS P1 TSL 5 BASIC21.8■■□□□ 1.08
PTPDC1A2A3K4 AC073592.3-201ENST00000625118 1834 ntBASIC21.8■■□□□ 1.08
PTPDC1A2A3K4 CTSD-212ENST00000637815 2003 ntAPPRIS ALT2 TSL 5 BASIC21.8■■□□□ 1.08
PTPDC1A2A3K4 CD2AP-201ENST00000359314 5412 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
PTPDC1A2A3K4 RCAN3-205ENST00000436717 2574 ntTSL 3 BASIC21.8■■□□□ 1.08
PTPDC1A2A3K4 C5orf30-203ENST00000515669 1573 ntAPPRIS P1 TSL 3 BASIC21.8■■□□□ 1.08
PTPDC1A2A3K4 KRT13-208ENST00000587544 1456 ntAPPRIS ALT2 TSL 1 (best) BASIC21.8■■□□□ 1.08
PTPDC1A2A3K4 OBP2B-205ENST00000618116 961 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
PTPDC1A2A3K4 AL023973.1-201ENST00000624619 620 ntBASIC21.8■■□□□ 1.08
PTPDC1A2A3K4 AC215522.2-202ENST00000633163 1143 ntTSL 5 BASIC21.8■■□□□ 1.08
PTPDC1A2A3K4 XYLT2-203ENST00000507602 2107 ntTSL 2 BASIC21.8■■□□□ 1.08
PTPDC1A2A3K4 EFHC1-206ENST00000635760 2030 ntTSL 5 BASIC21.8■■□□□ 1.08
PTPDC1A2A3K4 NF2-203ENST00000353887 1845 ntTSL 1 (best) BASIC21.8■■□□□ 1.08
PTPDC1A2A3K4 ANKS3-201ENST00000304283 2662 ntAPPRIS P1 TSL 2 BASIC21.8■■□□□ 1.08
PTPDC1A2A3K4 KCNQ5-202ENST00000355194 6566 ntAPPRIS ALT1 TSL 5 BASIC21.8■■□□□ 1.08
PTPDC1A2A3K4 KCNQ5-206ENST00000402622 6596 ntAPPRIS ALT2 TSL 5 BASIC21.8■■□□□ 1.08
PTPDC1A2A3K4 KHDC1-202ENST00000370384 1430 ntAPPRIS ALT2 TSL 1 (best) BASIC21.8■■□□□ 1.08
PTPDC1A2A3K4 DUS1L-202ENST00000354321 2151 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
PTPDC1A2A3K4 LONRF1-208ENST00000533751 3043 ntTSL 5 BASIC21.8■■□□□ 1.08
PTPDC1A2A3K4 SALRNA1-201ENST00000555871 2086 ntTSL 4 BASIC21.79■■□□□ 1.08
PTPDC1A2A3K4 EFTUD1P1-204ENST00000560401 1798 ntBASIC21.79■■□□□ 1.08
PTPDC1A2A3K4 KDM5C-203ENST00000375383 5122 ntAPPRIS ALT2 TSL 5 BASIC21.79■■□□□ 1.08
PTPDC1A2A3K4 ZNF839-202ENST00000442396 2987 ntAPPRIS P3 TSL 5 BASIC21.79■■□□□ 1.08
PTPDC1A2A3K4 AC135050.7-201ENST00000624508 2218 ntBASIC21.79■■□□□ 1.08
PTPDC1A2A3K4 SLCO4A1-201ENST00000217159 2776 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
PTPDC1A2A3K4 IMP3-201ENST00000314852 2028 ntAPPRIS P1 TSL 2 BASIC21.79■■□□□ 1.08
PTPDC1A2A3K4 AC008556.1-201ENST00000610908 2040 ntBASIC21.79■■□□□ 1.08
PTPDC1A2A3K4 PLPPR2-208ENST00000591608 2552 ntAPPRIS ALT2 TSL 2 BASIC21.79■■□□□ 1.08
PTPDC1A2A3K4 HERPUD2-201ENST00000311350 2474 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
PTPDC1A2A3K4 HNRNPM-201ENST00000325495 2494 ntAPPRIS P4 TSL 1 (best) BASIC21.79■■□□□ 1.08
PTPDC1A2A3K4 FOXI3-201ENST00000428390 2804 ntAPPRIS P1 TSL 3 BASIC21.79■■□□□ 1.08
PTPDC1A2A3K4 AZU1-201ENST00000233997 908 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
PTPDC1A2A3K4 COPE-203ENST00000351079 907 ntTSL 2 BASIC21.79■■□□□ 1.08
PTPDC1A2A3K4 BUB3-202ENST00000368859 667 ntTSL 3 BASIC21.79■■□□□ 1.08
PTPDC1A2A3K4 NFU1-202ENST00000394305 1058 ntTSL 5 BASIC21.79■■□□□ 1.08
PTPDC1A2A3K4 C21orf91-202ENST00000400558 1090 ntTSL 1 (best) BASIC21.79■■□□□ 1.08
PTPDC1A2A3K4 BX890604.1-205ENST00000425492 856 ntTSL 1 (best) BASIC21.79■■□□□ 1.08
Retrieved 100 of 98,524 protein–RNA pairs in 28.7 ms