Protein–RNA interactions for Protein: A0A0B4J235

TRAV13-2, T-cell receptor alpha variable 13-2 (Fragment), humanhuman

Predictions only

Length 113 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV13-2A0A0B4J235 TDRD7-201ENST00000355295 3834 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
TRAV13-2A0A0B4J235 NME4-202ENST00000382940 766 ntTSL 3 BASIC12.26□□□□□ -0.45
TRAV13-2A0A0B4J235 AL136116.3-201ENST00000402907 1138 ntBASIC12.26□□□□□ -0.45
TRAV13-2A0A0B4J235 RPH3AL-203ENST00000536489 1235 ntTSL 2 BASIC12.26□□□□□ -0.45
TRAV13-2A0A0B4J235 C19orf84-201ENST00000570516 788 ntAPPRIS ALT2 TSL 1 (best) BASIC12.26□□□□□ -0.45
TRAV13-2A0A0B4J235 JOSD2-205ENST00000601423 802 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
TRAV13-2A0A0B4J235 AC090241.2-201ENST00000602329 432 ntTSL 4 BASIC12.26□□□□□ -0.45
TRAV13-2A0A0B4J235 NME4-211ENST00000620944 1193 ntTSL 2 BASIC12.26□□□□□ -0.45
TRAV13-2A0A0B4J235 GTF3C5-201ENST00000342018 1905 ntTSL 5 BASIC12.26□□□□□ -0.45
TRAV13-2A0A0B4J235 AC126755.1-201ENST00000525846 6405 ntBASIC12.26□□□□□ -0.45
TRAV13-2A0A0B4J235 ZBTB32-201ENST00000262630 1960 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
TRAV13-2A0A0B4J235 TMEM91-203ENST00000392002 1389 ntAPPRIS P1 TSL 2 BASIC12.26□□□□□ -0.45
TRAV13-2A0A0B4J235 SNAI3-AS1-205ENST00000568633 2096 ntBASIC12.26□□□□□ -0.45
TRAV13-2A0A0B4J235 NARFL-201ENST00000251588 2112 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
TRAV13-2A0A0B4J235 RASD1-202ENST00000579152 1404 ntTSL 2 BASIC12.26□□□□□ -0.45
TRAV13-2A0A0B4J235 DUOX1-201ENST00000321429 5738 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
TRAV13-2A0A0B4J235 CD24-201ENST00000606017 2180 ntAPPRIS P3 TSL 1 (best) BASIC12.26□□□□□ -0.45
TRAV13-2A0A0B4J235 LRRFIP1-201ENST00000244815 4370 ntAPPRIS P3 TSL 1 (best) BASIC12.26□□□□□ -0.45
TRAV13-2A0A0B4J235 NAT6-204ENST00000443094 1464 ntAPPRIS ALT2 TSL 1 (best) BASIC12.26□□□□□ -0.45
TRAV13-2A0A0B4J235 SPPL2C-201ENST00000329196 2238 ntAPPRIS P1 BASIC12.26□□□□□ -0.45
TRAV13-2A0A0B4J235 TMC6-216ENST00000590602 5268 ntAPPRIS P1 TSL 2 BASIC12.26□□□□□ -0.45
TRAV13-2A0A0B4J235 KLHL24-201ENST00000242810 2345 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
TRAV13-2A0A0B4J235 ICMT-201ENST00000343813 4771 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
TRAV13-2A0A0B4J235 RNF112-201ENST00000461366 3212 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
TRAV13-2A0A0B4J235 TM2D2-201ENST00000397070 1631 ntTSL 1 (best) BASIC12.26□□□□□ -0.45
TRAV13-2A0A0B4J235 GALNT16-204ENST00000553669 1629 ntTSL 1 (best) BASIC12.26□□□□□ -0.45
TRAV13-2A0A0B4J235 TSPAN15-201ENST00000373290 1698 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
TRAV13-2A0A0B4J235 CD247-202ENST00000392122 1678 ntAPPRIS ALT1 TSL 1 (best) BASIC12.26□□□□□ -0.45
TRAV13-2A0A0B4J235 TMEM74-201ENST00000297459 1741 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
TRAV13-2A0A0B4J235 NUDT9-201ENST00000302174 1701 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
TRAV13-2A0A0B4J235 FARSA-202ENST00000423140 1720 ntTSL 2 BASIC12.25□□□□□ -0.45
TRAV13-2A0A0B4J235 RNH1-206ENST00000438658 1725 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
TRAV13-2A0A0B4J235 ZNF274-202ENST00000345813 2678 ntAPPRIS ALT2 TSL 1 (best) BASIC12.25□□□□□ -0.45
TRAV13-2A0A0B4J235 XPO5-201ENST00000265351 5364 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
TRAV13-2A0A0B4J235 C1orf159-205ENST00000421241 1841 ntAPPRIS P3 TSL 2 BASIC12.25□□□□□ -0.45
TRAV13-2A0A0B4J235 FBXO44-201ENST00000251546 1896 ntTSL 2 BASIC12.25□□□□□ -0.45
TRAV13-2A0A0B4J235 FNBP1-201ENST00000355681 1977 ntTSL 2 BASIC12.25□□□□□ -0.45
TRAV13-2A0A0B4J235 TMEM229B-201ENST00000357461 4068 ntAPPRIS P1 TSL 2 BASIC12.25□□□□□ -0.45
TRAV13-2A0A0B4J235 TPD52L1-202ENST00000368388 2147 ntTSL 1 (best) BASIC12.25□□□□□ -0.45
TRAV13-2A0A0B4J235 RUVBL1-202ENST00000464873 2126 ntTSL 2 BASIC12.25□□□□□ -0.45
TRAV13-2A0A0B4J235 PHF20L1-201ENST00000220847 3297 ntTSL 5 BASIC12.25□□□□□ -0.45
TRAV13-2A0A0B4J235 PHKG2-204ENST00000563588 5539 ntAPPRIS P2 TSL 1 (best) BASIC12.25□□□□□ -0.45
TRAV13-2A0A0B4J235 PML-220ENST00000569477 2251 ntAPPRIS ALT2 TSL 1 (best) BASIC12.25□□□□□ -0.45
TRAV13-2A0A0B4J235 JKAMP-215ENST00000616435 2338 ntTSL 5 BASIC12.25□□□□□ -0.45
TRAV13-2A0A0B4J235 PEMT-201ENST00000255389 1013 ntTSL 1 (best) BASIC12.25□□□□□ -0.45
TRAV13-2A0A0B4J235 ASMT-202ENST00000381233 989 ntTSL 1 (best) BASIC12.25□□□□□ -0.45
TRAV13-2A0A0B4J235 KRT18P68-201ENST00000392293 1000 ntBASIC12.25□□□□□ -0.45
TRAV13-2A0A0B4J235 RALGDS-205ENST00000393160 3801 ntAPPRIS ALT2 TSL 1 (best) BASIC12.25□□□□□ -0.45
TRAV13-2A0A0B4J235 AC073343.2-201ENST00000413182 548 ntTSL 4 BASIC12.25□□□□□ -0.45
TRAV13-2A0A0B4J235 TRAPPC2L-213ENST00000567895 854 ntTSL 3 BASIC12.25□□□□□ -0.45
TRAV13-2A0A0B4J235 HSD17B14-204ENST00000599157 991 ntTSL 3 BASIC12.25□□□□□ -0.45
TRAV13-2A0A0B4J235 RASSF8-AS1-202ENST00000500276 2610 ntTSL 2 BASIC12.25□□□□□ -0.45
TRAV13-2A0A0B4J235 DHCR7-201ENST00000355527 2666 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
TRAV13-2A0A0B4J235 STX18-205ENST00000505286 1380 ntTSL 1 (best) BASIC12.25□□□□□ -0.45
TRAV13-2A0A0B4J235 RHBDL1-202ENST00000352681 1463 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
TRAV13-2A0A0B4J235 MGAT1-202ENST00000333055 8863 ntAPPRIS P1 TSL 2 BASIC12.25□□□□□ -0.45
TRAV13-2A0A0B4J235 DND1-201ENST00000542735 1605 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
TRAV13-2A0A0B4J235 LRRC23-201ENST00000007969 1615 ntAPPRIS P4 TSL 1 (best) BASIC12.25□□□□□ -0.45
TRAV13-2A0A0B4J235 MAFG-202ENST00000392366 1743 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
TRAV13-2A0A0B4J235 ARAP1-AS2-201ENST00000500163 1824 ntTSL 2 BASIC12.25□□□□□ -0.45
TRAV13-2A0A0B4J235 FLYWCH1P1-201ENST00000460917 1874 ntBASIC12.25□□□□□ -0.45
TRAV13-2A0A0B4J235 AANAT-201ENST00000250615 1913 ntTSL 1 (best) BASIC12.25□□□□□ -0.45
TRAV13-2A0A0B4J235 LINC01569-202ENST00000573042 2093 ntTSL 2 BASIC12.25□□□□□ -0.45
TRAV13-2A0A0B4J235 SNX2-213ENST00000514949 2119 ntTSL 2 BASIC12.25□□□□□ -0.45
TRAV13-2A0A0B4J235 DUS1L-202ENST00000354321 2151 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
TRAV13-2A0A0B4J235 BPIFB4-201ENST00000375483 2159 ntAPPRIS P1 TSL 5 BASIC12.25□□□□□ -0.45
TRAV13-2A0A0B4J235 CROCC-201ENST00000375541 6656 ntAPPRIS P1 TSL 5 BASIC12.25□□□□□ -0.45
TRAV13-2A0A0B4J235 ATXN2-219ENST00000550104 4648 ntAPPRIS P3 TSL 1 (best) BASIC12.25□□□□□ -0.45
TRAV13-2A0A0B4J235 SHANK3-201ENST00000262795 7091 ntAPPRIS P5 TSL 5 BASIC12.25□□□□□ -0.45
TRAV13-2A0A0B4J235 TJP3-201ENST00000539908 2897 ntAPPRIS ALT2 TSL 2 BASIC12.24□□□□□ -0.45
TRAV13-2A0A0B4J235 CHRD-202ENST00000348986 3155 ntAPPRIS ALT2 TSL 5 BASIC12.24□□□□□ -0.45
TRAV13-2A0A0B4J235 RB1CC1-202ENST00000435644 6614 ntAPPRIS ALT1 TSL 1 (best) BASIC12.24□□□□□ -0.45
TRAV13-2A0A0B4J235 PITPNM2-208ENST00000542749 6660 ntAPPRIS P3 TSL 1 (best) BASIC12.24□□□□□ -0.45
TRAV13-2A0A0B4J235 GRIN3A-201ENST00000361820 7770 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
TRAV13-2A0A0B4J235 PCDH17-201ENST00000377918 8232 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
TRAV13-2A0A0B4J235 CYP4F2-201ENST00000011989 2067 ntAPPRIS ALT1 TSL 1 (best) BASIC12.24□□□□□ -0.45
TRAV13-2A0A0B4J235 CCDC62-201ENST00000253079 3546 ntAPPRIS P2 TSL 1 (best) BASIC12.24□□□□□ -0.45
TRAV13-2A0A0B4J235 RNF128-201ENST00000255499 2817 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
TRAV13-2A0A0B4J235 KRT8-201ENST00000293308 1882 ntAPPRIS P1 TSL 5 BASIC12.24□□□□□ -0.45
TRAV13-2A0A0B4J235 ATOH1-201ENST00000306011 2212 ntAPPRIS P1 BASIC12.24□□□□□ -0.45
TRAV13-2A0A0B4J235 SPESP1-201ENST00000310673 1431 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
TRAV13-2A0A0B4J235 FLJ13224-201ENST00000313737 1514 ntBASIC12.24□□□□□ -0.45
TRAV13-2A0A0B4J235 YARS2-201ENST00000324868 2122 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
TRAV13-2A0A0B4J235 TNFRSF18-201ENST00000328596 851 ntAPPRIS P4 TSL 1 (best) BASIC12.24□□□□□ -0.45
TRAV13-2A0A0B4J235 PRR23B-201ENST00000329447 1896 ntAPPRIS P1 BASIC12.24□□□□□ -0.45
TRAV13-2A0A0B4J235 GYG2P1-201ENST00000357871 623 ntTSL 3 BASIC12.24□□□□□ -0.45
TRAV13-2A0A0B4J235 C6orf89-203ENST00000373685 1400 ntAPPRIS ALT2 TSL 5 BASIC12.24□□□□□ -0.45
TRAV13-2A0A0B4J235 TNFRSF18-202ENST00000379265 705 ntAPPRIS ALT2 TSL 1 (best) BASIC12.24□□□□□ -0.45
TRAV13-2A0A0B4J235 CDC37L1-202ENST00000381858 1244 ntTSL 5 BASIC12.24□□□□□ -0.45
TRAV13-2A0A0B4J235 PTPRN2-201ENST00000389413 4723 ntTSL 1 (best) BASIC12.24□□□□□ -0.45
TRAV13-2A0A0B4J235 CDKN2AIPNL-201ENST00000395009 800 ntTSL 1 (best) BASIC12.24□□□□□ -0.45
TRAV13-2A0A0B4J235 RAB34-203ENST00000395243 1597 ntTSL 1 (best) BASIC12.24□□□□□ -0.45
TRAV13-2A0A0B4J235 NCOA1-205ENST00000406961 7289 ntAPPRIS P4 TSL 5 BASIC12.24□□□□□ -0.45
TRAV13-2A0A0B4J235 INPP4A-204ENST00000409540 3231 ntTSL 1 (best) BASIC12.24□□□□□ -0.45
TRAV13-2A0A0B4J235 LINC00472-203ENST00000426635 2958 ntTSL 2 BASIC12.24□□□□□ -0.45
TRAV13-2A0A0B4J235 SDHA-204ENST00000504309 2067 ntTSL 5 BASIC12.24□□□□□ -0.45
TRAV13-2A0A0B4J235 MFSD10-205ENST00000507555 1573 ntTSL 5 BASIC12.24□□□□□ -0.45
TRAV13-2A0A0B4J235 FAM174B-207ENST00000555748 866 ntAPPRIS ALT2 TSL 3 BASIC12.24□□□□□ -0.45
TRAV13-2A0A0B4J235 AC087500.1-202ENST00000571689 1715 ntTSL 1 (best) BASIC12.24□□□□□ -0.45
TRAV13-2A0A0B4J235 RPS15-206ENST00000589656 473 ntAPPRIS ALT1 TSL 5 BASIC12.24□□□□□ -0.45
Retrieved 100 of 98,524 protein–RNA pairs in 27.7 ms