Protein–RNA interactions for Protein: A0A0A0MS03

TRBV5-3, T-cell receptor beta variable 5-3 (non-functional) (Fragment), humanhuman

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRBV5-3A0A0A0MS03 BIN1-208ENST00000376113 1832 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
TRBV5-3A0A0A0MS03 ACSM2B-208ENST00000565322 1834 ntTSL 2 BASIC17.4■□□□□ 0.38
TRBV5-3A0A0A0MS03 AC096733.2-201ENST00000609937 1394 ntBASIC17.4■□□□□ 0.38
TRBV5-3A0A0A0MS03 PRSS36-201ENST00000268281 2840 ntAPPRIS P3 TSL 1 (best) BASIC17.39■□□□□ 0.38
TRBV5-3A0A0A0MS03 TRA2A-211ENST00000538367 2142 ntAPPRIS ALT2 TSL 2 BASIC17.39■□□□□ 0.38
TRBV5-3A0A0A0MS03 DIDO1-203ENST00000370366 2383 ntTSL 1 (best) BASIC17.39■□□□□ 0.38
TRBV5-3A0A0A0MS03 CYP2D7-201ENST00000358097 1655 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
TRBV5-3A0A0A0MS03 HLA-DQB1-201ENST00000374943 1656 ntBASIC17.39■□□□□ 0.37
TRBV5-3A0A0A0MS03 ENOPH1-202ENST00000505846 1689 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
TRBV5-3A0A0A0MS03 NPFFR2-201ENST00000308744 1922 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
TRBV5-3A0A0A0MS03 TBC1D3I-202ENST00000618620 1900 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
TRBV5-3A0A0A0MS03 CASD1-201ENST00000297273 3942 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
TRBV5-3A0A0A0MS03 IFNLR1-202ENST00000327575 1476 ntAPPRIS ALT2 TSL 1 (best) BASIC17.39■□□□□ 0.37
TRBV5-3A0A0A0MS03 GOLGA7-204ENST00000520817 1984 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
TRBV5-3A0A0A0MS03 ANKRD6-204ENST00000447838 2968 ntAPPRIS P3 TSL 1 (best) BASIC17.39■□□□□ 0.37
TRBV5-3A0A0A0MS03 MFGE8-202ENST00000268151 1752 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
TRBV5-3A0A0A0MS03 GUK1-209ENST00000366730 937 ntAPPRIS P3 TSL 3 BASIC17.39■□□□□ 0.37
TRBV5-3A0A0A0MS03 FAM167B-201ENST00000373582 936 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
TRBV5-3A0A0A0MS03 SNX5-213ENST00000486039 602 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
TRBV5-3A0A0A0MS03 TNFRSF18-204ENST00000486728 727 ntAPPRIS ALT2 TSL 1 (best) BASIC17.39■□□□□ 0.37
TRBV5-3A0A0A0MS03 STAC3-202ENST00000546246 1014 ntTSL 2 BASIC17.39■□□□□ 0.37
TRBV5-3A0A0A0MS03 EFTUD1P1-201ENST00000558187 596 ntTSL 4 BASIC17.39■□□□□ 0.37
TRBV5-3A0A0A0MS03 MAPKAPK3-208ENST00000621469 2563 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
TRBV5-3A0A0A0MS03 AC120049.1-201ENST00000592638 2065 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
TRBV5-3A0A0A0MS03 GMCL1P1-201ENST00000463439 1581 ntBASIC17.39■□□□□ 0.37
TRBV5-3A0A0A0MS03 HDAC10-201ENST00000216271 2687 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
TRBV5-3A0A0A0MS03 HOTAIR-201ENST00000424518 2421 ntTSL 5 BASIC17.39■□□□□ 0.37
TRBV5-3A0A0A0MS03 TMEM59L-201ENST00000262817 1613 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
TRBV5-3A0A0A0MS03 FAM118A-202ENST00000405673 1612 ntTSL 5 BASIC17.39■□□□□ 0.37
TRBV5-3A0A0A0MS03 TAL1-202ENST00000371884 4642 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
TRBV5-3A0A0A0MS03 AVL9-209ENST00000640103 1367 ntTSL 5 BASIC17.39■□□□□ 0.37
TRBV5-3A0A0A0MS03 SH2D3C-203ENST00000373277 2750 ntAPPRIS ALT2 TSL 1 (best) BASIC17.39■□□□□ 0.37
TRBV5-3A0A0A0MS03 PIP5K1C-201ENST00000335312 5080 ntAPPRIS P3 TSL 1 (best) BASIC17.39■□□□□ 0.37
TRBV5-3A0A0A0MS03 ARID3C-201ENST00000378909 1411 ntAPPRIS P1 TSL 2 BASIC17.38■□□□□ 0.37
TRBV5-3A0A0A0MS03 USP36-203ENST00000542802 6063 ntAPPRIS P2 TSL 1 (best) BASIC17.38■□□□□ 0.37
TRBV5-3A0A0A0MS03 IFFO1-201ENST00000336604 2686 ntAPPRIS P3 TSL 1 (best) BASIC17.38■□□□□ 0.37
TRBV5-3A0A0A0MS03 GTF2IP1-210ENST00000622829 3605 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
TRBV5-3A0A0A0MS03 SLC25A29-215ENST00000556505 1540 ntTSL 2 BASIC17.38■□□□□ 0.37
TRBV5-3A0A0A0MS03 ZDHHC4-205ENST00000396713 1552 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
TRBV5-3A0A0A0MS03 GATA2-202ENST00000430265 2525 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
TRBV5-3A0A0A0MS03 MRPL12-201ENST00000333676 1028 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
TRBV5-3A0A0A0MS03 MPV17L-202ENST00000396385 1037 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
TRBV5-3A0A0A0MS03 ELP6-205ENST00000439305 880 ntTSL 2 BASIC17.38■□□□□ 0.37
TRBV5-3A0A0A0MS03 AC128676.1-201ENST00000454392 318 ntBASIC17.38■□□□□ 0.37
TRBV5-3A0A0A0MS03 ARMC4P1-202ENST00000576034 643 ntTSL 2 BASIC17.38■□□□□ 0.37
TRBV5-3A0A0A0MS03 SMAD7-207ENST00000589634 1278 ntAPPRIS ALT1 TSL 4 BASIC17.38■□□□□ 0.37
TRBV5-3A0A0A0MS03 AC091551.1-201ENST00000590722 1228 ntAPPRIS P1 TSL 2 BASIC17.38■□□□□ 0.37
TRBV5-3A0A0A0MS03 AC034236.2-201ENST00000606662 1610 ntBASIC17.38■□□□□ 0.37
TRBV5-3A0A0A0MS03 AC005498.3-201ENST00000596587 2045 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
TRBV5-3A0A0A0MS03 PRMT1-201ENST00000391851 1393 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
TRBV5-3A0A0A0MS03 LRRC23-207ENST00000433346 1387 ntTSL 5 BASIC17.38■□□□□ 0.37
TRBV5-3A0A0A0MS03 SATB2-203ENST00000428695 2135 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
TRBV5-3A0A0A0MS03 ZBTB16-201ENST00000335953 2523 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
TRBV5-3A0A0A0MS03 ADSL-202ENST00000342312 1808 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
TRBV5-3A0A0A0MS03 LUC7L-221ENST00000629543 1520 ntTSL 5 BASIC17.37■□□□□ 0.37
TRBV5-3A0A0A0MS03 PIF1-201ENST00000268043 2687 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
TRBV5-3A0A0A0MS03 CHTOP-205ENST00000403433 1923 ntAPPRIS ALT2 TSL 5 BASIC17.37■□□□□ 0.37
TRBV5-3A0A0A0MS03 RTN4-204ENST00000357732 2390 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
TRBV5-3A0A0A0MS03 ADAMTS8-201ENST00000257359 4010 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
TRBV5-3A0A0A0MS03 NCOA6-207ENST00000616167 3271 ntAPPRIS ALT2 TSL 5 BASIC17.37■□□□□ 0.37
TRBV5-3A0A0A0MS03 TMEM240-201ENST00000378733 718 ntAPPRIS P1 TSL 2 BASIC17.37■□□□□ 0.37
TRBV5-3A0A0A0MS03 PDCD2-202ENST00000392090 936 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
TRBV5-3A0A0A0MS03 MCCD1P1-208ENST00000445732 328 ntBASIC17.37■□□□□ 0.37
TRBV5-3A0A0A0MS03 TK2-204ENST00000525974 1178 ntTSL 2 BASIC17.37■□□□□ 0.37
TRBV5-3A0A0A0MS03 ETS1-207ENST00000531611 2134 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
TRBV5-3A0A0A0MS03 KDM2B-217ENST00000543852 1188 ntTSL 5 BASIC17.37■□□□□ 0.37
TRBV5-3A0A0A0MS03 AC004771.5-201ENST00000575985 542 ntTSL 4 BASIC17.37■□□□□ 0.37
TRBV5-3A0A0A0MS03 PSMC3IP-208ENST00000590760 664 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
TRBV5-3A0A0A0MS03 RNPS1-202ENST00000320225 2241 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
TRBV5-3A0A0A0MS03 ARNTL-205ENST00000403510 2745 ntTSL 2 BASIC17.37■□□□□ 0.37
TRBV5-3A0A0A0MS03 PRSS50-202ENST00000315170 1372 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
TRBV5-3A0A0A0MS03 GPS2-201ENST00000380728 1379 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
TRBV5-3A0A0A0MS03 MFSD11-220ENST00000621483 2850 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
TRBV5-3A0A0A0MS03 C16orf45-201ENST00000300006 2404 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
TRBV5-3A0A0A0MS03 ELMOD1-202ENST00000443271 1990 ntAPPRIS P1 TSL 2 BASIC17.37■□□□□ 0.37
TRBV5-3A0A0A0MS03 PLCL1-201ENST00000428675 5125 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
TRBV5-3A0A0A0MS03 DUS1L-201ENST00000306796 2068 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
TRBV5-3A0A0A0MS03 BPIFB4-201ENST00000375483 2159 ntAPPRIS P1 TSL 5 BASIC17.36■□□□□ 0.37
TRBV5-3A0A0A0MS03 ZNF589-203ENST00000427617 1677 ntTSL 2 BASIC17.36■□□□□ 0.37
TRBV5-3A0A0A0MS03 NIFK-201ENST00000285814 1734 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
TRBV5-3A0A0A0MS03 INSR-201ENST00000302850 4721 ntAPPRIS P3 TSL 1 (best) BASIC17.36■□□□□ 0.37
TRBV5-3A0A0A0MS03 FOLH1-204ENST00000356696 2403 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
TRBV5-3A0A0A0MS03 MIPEP-201ENST00000382172 2400 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
TRBV5-3A0A0A0MS03 CTAG2-201ENST00000247306 993 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
TRBV5-3A0A0A0MS03 F8A2-201ENST00000369505 1116 ntAPPRIS P1 BASIC17.36■□□□□ 0.37
TRBV5-3A0A0A0MS03 MCHR1-202ENST00000381433 1219 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
TRBV5-3A0A0A0MS03 DMRT2-206ENST00000412350 1244 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
TRBV5-3A0A0A0MS03 TMEM240-202ENST00000425828 717 ntAPPRIS P1 TSL 2 BASIC17.36■□□□□ 0.37
TRBV5-3A0A0A0MS03 AC007405.3-201ENST00000429172 561 ntTSL 3 BASIC17.36■□□□□ 0.37
TRBV5-3A0A0A0MS03 FAM86C2P-201ENST00000525180 435 ntTSL 4 BASIC17.36■□□□□ 0.37
TRBV5-3A0A0A0MS03 C1QBPP2-201ENST00000528754 825 ntBASIC17.36■□□□□ 0.37
TRBV5-3A0A0A0MS03 RNF121-214ENST00000533380 870 ntTSL 3 BASIC17.36■□□□□ 0.37
TRBV5-3A0A0A0MS03 ICAM2-207ENST00000579687 1154 ntAPPRIS P1 TSL 3 BASIC17.36■□□□□ 0.37
TRBV5-3A0A0A0MS03 RPS15-203ENST00000586096 570 ntTSL 2 BASIC17.36■□□□□ 0.37
TRBV5-3A0A0A0MS03 PRRT1-201ENST00000211413 1909 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
TRBV5-3A0A0A0MS03 GAB1-201ENST00000262994 2648 ntAPPRIS ALT1 TSL 1 (best) BASIC17.36■□□□□ 0.37
TRBV5-3A0A0A0MS03 PLA2G4C-222ENST00000599921 1984 ntAPPRIS P3 TSL 1 (best) BASIC17.36■□□□□ 0.37
TRBV5-3A0A0A0MS03 AK4-208ENST00000546702 1335 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
TRBV5-3A0A0A0MS03 STK4-201ENST00000372801 2038 ntTSL 2 BASIC17.36■□□□□ 0.37
TRBV5-3A0A0A0MS03 TBKBP1-204ENST00000622396 2010 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
Retrieved 100 of 98,524 protein–RNA pairs in 39.3 ms