Protein–RNA interactions for Protein: Q9Y5H0

PCDHGA3, Protocadherin gamma-A3, humanhuman

Predictions only

Length 932 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGA3Q9Y5H0 OGG1-217ENST00000449570 1948 ntTSL 5 BASIC18.05■□□□□ 0.48
PCDHGA3Q9Y5H0 ABCB9-202ENST00000344275 2394 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
PCDHGA3Q9Y5H0 WIPF2-202ENST00000394103 2378 ntAPPRIS ALT2 TSL 5 BASIC18.05■□□□□ 0.48
PCDHGA3Q9Y5H0 ZNRF1-202ENST00000335325 4620 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
PCDHGA3Q9Y5H0 TESMIN-201ENST00000255087 2579 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
PCDHGA3Q9Y5H0 CREG2-201ENST00000324768 6383 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
PCDHGA3Q9Y5H0 PTGER3-202ENST00000351052 1404 ntAPPRIS ALT2 TSL 5 BASIC18.05■□□□□ 0.48
PCDHGA3Q9Y5H0 TNFRSF19-202ENST00000382258 1625 ntAPPRIS P4 TSL 1 (best) BASIC18.05■□□□□ 0.48
PCDHGA3Q9Y5H0 ZDHHC2-201ENST00000262096 6377 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
PCDHGA3Q9Y5H0 CERS6-201ENST00000305747 7217 ntAPPRIS P3 TSL 2 BASIC18.05■□□□□ 0.48
PCDHGA3Q9Y5H0 GDF10-201ENST00000580279 2458 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
PCDHGA3Q9Y5H0 CHST2-201ENST00000309575 4582 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
PCDHGA3Q9Y5H0 THTPA-202ENST00000404535 1779 ntAPPRIS P1 TSL 2 BASIC18.04■□□□□ 0.48
PCDHGA3Q9Y5H0 AC104417.2-201ENST00000562989 1793 ntBASIC18.04■□□□□ 0.48
PCDHGA3Q9Y5H0 AKIRIN1-201ENST00000372984 1330 ntTSL 2 BASIC18.04■□□□□ 0.48
PCDHGA3Q9Y5H0 MMAB-204ENST00000537236 1342 ntTSL 3 BASIC18.04■□□□□ 0.48
PCDHGA3Q9Y5H0 MRPL3-201ENST00000264995 1706 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
PCDHGA3Q9Y5H0 RNF114-201ENST00000244061 2503 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
PCDHGA3Q9Y5H0 CMIP-209ENST00000566513 2288 ntTSL 5 BASIC18.04■□□□□ 0.48
PCDHGA3Q9Y5H0 ILF2-202ENST00000368681 726 ntTSL 2 BASIC18.04■□□□□ 0.48
PCDHGA3Q9Y5H0 CHTOP-202ENST00000368687 1094 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
PCDHGA3Q9Y5H0 RNF216P1-205ENST00000406089 807 ntTSL 5 BASIC18.04■□□□□ 0.48
PCDHGA3Q9Y5H0 LINC00421-201ENST00000413833 1054 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
PCDHGA3Q9Y5H0 TSPY21P-201ENST00000433481 731 ntBASIC18.04■□□□□ 0.48
PCDHGA3Q9Y5H0 DUSP5P1-201ENST00000441325 1139 ntBASIC18.04■□□□□ 0.48
PCDHGA3Q9Y5H0 HCG4P8-203ENST00000443049 980 ntBASIC18.04■□□□□ 0.48
PCDHGA3Q9Y5H0 CHCHD3-203ENST00000448878 1038 ntTSL 5 BASIC18.04■□□□□ 0.48
PCDHGA3Q9Y5H0 DGUOK-AS1-203ENST00000453103 601 ntTSL 3 BASIC18.04■□□□□ 0.48
PCDHGA3Q9Y5H0 NDUFV2-AS1-203ENST00000608008 779 ntBASIC18.04■□□□□ 0.48
PCDHGA3Q9Y5H0 SETD3-209ENST00000630307 1281 ntTSL 5 BASIC18.04■□□□□ 0.48
PCDHGA3Q9Y5H0 DAG1-221ENST00000541308 5676 ntAPPRIS P1 TSL 5 BASIC18.04■□□□□ 0.48
PCDHGA3Q9Y5H0 CADPS2-202ENST00000334010 6045 ntAPPRIS ALT2 TSL 5 BASIC18.04■□□□□ 0.48
PCDHGA3Q9Y5H0 RFC2-213ENST00000621097 1635 ntTSL 5 BASIC18.04■□□□□ 0.48
PCDHGA3Q9Y5H0 RAB29-205ENST00000446390 1441 ntTSL 2 BASIC18.04■□□□□ 0.48
PCDHGA3Q9Y5H0 LINC01311-201ENST00000565162 1445 ntBASIC18.04■□□□□ 0.48
PCDHGA3Q9Y5H0 KBTBD11-201ENST00000320248 6710 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
PCDHGA3Q9Y5H0 TMEM109-202ENST00000536171 1959 ntAPPRIS P1 TSL 2 BASIC18.04■□□□□ 0.48
PCDHGA3Q9Y5H0 IFFO1-212ENST00000619571 2724 ntTSL 2 BASIC18.04■□□□□ 0.48
PCDHGA3Q9Y5H0 KIF1BP-201ENST00000361983 2544 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
PCDHGA3Q9Y5H0 SLC52A2-209ENST00000530047 1757 ntAPPRIS P1 TSL 2 BASIC18.04■□□□□ 0.48
PCDHGA3Q9Y5H0 FOXN3-214ENST00000557258 2692 ntAPPRIS P3 TSL 1 (best) BASIC18.04■□□□□ 0.48
PCDHGA3Q9Y5H0 NECAB3-202ENST00000375238 1942 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
PCDHGA3Q9Y5H0 MOB3C-202ENST00000319928 2822 ntAPPRIS P1 TSL 2 BASIC18.04■□□□□ 0.48
PCDHGA3Q9Y5H0 BAG5-201ENST00000299204 4848 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
PCDHGA3Q9Y5H0 ZNF582-207ENST00000619584 2297 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
PCDHGA3Q9Y5H0 USP25-204ENST00000400183 5341 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
PCDHGA3Q9Y5H0 PLCXD1-202ENST00000381663 1863 ntAPPRIS P2 TSL 5 BASIC18.03■□□□□ 0.48
PCDHGA3Q9Y5H0 CLUH-201ENST00000435359 5224 ntAPPRIS P2 TSL 5 BASIC18.03■□□□□ 0.48
PCDHGA3Q9Y5H0 RUBCNL-203ENST00000378787 2731 ntTSL 2 BASIC18.03■□□□□ 0.48
PCDHGA3Q9Y5H0 FIP1L1-203ENST00000358575 2180 ntAPPRIS P4 TSL 2 BASIC18.03■□□□□ 0.48
PCDHGA3Q9Y5H0 MAGED2-213ENST00000627068 1811 ntAPPRIS ALT2 TSL 5 BASIC18.03■□□□□ 0.48
PCDHGA3Q9Y5H0 SLC5A10-205ENST00000417251 1984 ntTSL 2 BASIC18.03■□□□□ 0.48
PCDHGA3Q9Y5H0 SBDS-201ENST00000246868 1631 ntAPPRIS P2 TSL 1 (best) BASIC18.03■□□□□ 0.48
PCDHGA3Q9Y5H0 TBC1D3P2-202ENST00000577902 1649 ntBASIC18.03■□□□□ 0.48
PCDHGA3Q9Y5H0 PCCA-203ENST00000376286 2481 ntTSL 2 BASIC18.03■□□□□ 0.48
PCDHGA3Q9Y5H0 AP000347.1-209ENST00000437294 557 ntTSL 4 BASIC18.03■□□□□ 0.48
PCDHGA3Q9Y5H0 AC022424.1-201ENST00000512155 889 ntTSL 3 BASIC18.03■□□□□ 0.48
PCDHGA3Q9Y5H0 LINC00910-203ENST00000587874 544 ntTSL 4 BASIC18.03■□□□□ 0.48
PCDHGA3Q9Y5H0 LINC01785-201ENST00000598042 1112 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
PCDHGA3Q9Y5H0 AC064834.1-201ENST00000606986 503 ntTSL 3 BASIC18.03■□□□□ 0.48
PCDHGA3Q9Y5H0 GPX4-210ENST00000611653 793 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
PCDHGA3Q9Y5H0 CR769767.2-201ENST00000622735 460 ntBASIC18.03■□□□□ 0.48
PCDHGA3Q9Y5H0 GNB1-201ENST00000378609 3132 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
PCDHGA3Q9Y5H0 FAM72C-202ENST00000584486 2297 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
PCDHGA3Q9Y5H0 KRT16P3-203ENST00000580621 1939 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
PCDHGA3Q9Y5H0 NOM1-201ENST00000275820 6077 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
PCDHGA3Q9Y5H0 CAMKK1-202ENST00000348335 3563 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
PCDHGA3Q9Y5H0 PIGQ-206ENST00000422307 2052 ntTSL 3 BASIC18.03■□□□□ 0.48
PCDHGA3Q9Y5H0 HLA-G-205ENST00000428701 1578 ntAPPRIS P2 BASIC18.03■□□□□ 0.48
PCDHGA3Q9Y5H0 WIPI1-202ENST00000546360 1575 ntTSL 2 BASIC18.03■□□□□ 0.48
PCDHGA3Q9Y5H0 AC004982.2-201ENST00000609497 1578 ntTSL 2 BASIC18.03■□□□□ 0.48
PCDHGA3Q9Y5H0 TMSB4X-203ENST00000380636 1702 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
PCDHGA3Q9Y5H0 PRKCSH-209ENST00000589838 1898 ntAPPRIS P3 TSL 1 (best) BASIC18.03■□□□□ 0.48
PCDHGA3Q9Y5H0 UBE2Q2-208ENST00000569423 2969 ntTSL 2 BASIC18.03■□□□□ 0.48
PCDHGA3Q9Y5H0 PER3-203ENST00000377541 1524 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
PCDHGA3Q9Y5H0 AL390860.1-201ENST00000449298 1541 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
PCDHGA3Q9Y5H0 AC126773.2-201ENST00000562172 1682 ntTSL 3 BASIC18.03■□□□□ 0.48
PCDHGA3Q9Y5H0 ACBD4-215ENST00000592162 1684 ntTSL 5 BASIC18.03■□□□□ 0.48
PCDHGA3Q9Y5H0 ACY1-215ENST00000636358 1684 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
PCDHGA3Q9Y5H0 GPR42-201ENST00000454971 1804 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
PCDHGA3Q9Y5H0 TMEM91-209ENST00000539627 1843 ntTSL 1 (best) BASIC18.02■□□□□ 0.48
PCDHGA3Q9Y5H0 SULF2-201ENST00000359930 4915 ntAPPRIS P4 TSL 1 (best) BASIC18.02■□□□□ 0.48
PCDHGA3Q9Y5H0 RCAN3-205ENST00000436717 2574 ntTSL 3 BASIC18.02■□□□□ 0.48
PCDHGA3Q9Y5H0 DNASE1L2-201ENST00000320700 1326 ntTSL 1 (best) BASIC18.02■□□□□ 0.48
PCDHGA3Q9Y5H0 ZFC3H1-206ENST00000548100 1771 ntTSL 1 (best) BASIC18.02■□□□□ 0.48
PCDHGA3Q9Y5H0 TLCD1-201ENST00000292090 1017 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
PCDHGA3Q9Y5H0 C20orf196-201ENST00000303142 1154 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
PCDHGA3Q9Y5H0 MCUR1-201ENST00000379170 5471 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
PCDHGA3Q9Y5H0 CA7-202ENST00000394069 1713 ntTSL 1 (best) BASIC18.02■□□□□ 0.48
PCDHGA3Q9Y5H0 SPDYE15P-201ENST00000424157 909 ntBASIC18.02■□□□□ 0.48
PCDHGA3Q9Y5H0 AC106771.1-201ENST00000502209 372 ntTSL 2 BASIC18.02■□□□□ 0.48
PCDHGA3Q9Y5H0 AC008691.1-203ENST00000515337 1580 ntTSL 2 BASIC18.02■□□□□ 0.48
PCDHGA3Q9Y5H0 RAP1B-228ENST00000542145 1060 ntTSL 2 BASIC18.02■□□□□ 0.48
PCDHGA3Q9Y5H0 AP1S2-206ENST00000545766 576 ntTSL 1 (best) BASIC18.02■□□□□ 0.48
PCDHGA3Q9Y5H0 CHRNB1-207ENST00000575379 1095 ntTSL 2 BASIC18.02■□□□□ 0.48
PCDHGA3Q9Y5H0 FGF14-AS2-201ENST00000606448 1074 ntBASIC18.02■□□□□ 0.48
PCDHGA3Q9Y5H0 Metazoa_SRP.33-201ENST00000613468 285 ntBASIC18.02■□□□□ 0.48
PCDHGA3Q9Y5H0 PIGQ-209ENST00000470411 2112 ntTSL 1 (best) BASIC18.02■□□□□ 0.47
PCDHGA3Q9Y5H0 MYEOV-202ENST00000441339 1996 ntAPPRIS P3 TSL 2 BASIC18.02■□□□□ 0.47
PCDHGA3Q9Y5H0 SPON2-203ENST00000431380 1802 ntAPPRIS P1 TSL 5 BASIC18.02■□□□□ 0.47
Retrieved 100 of 98,524 protein–RNA pairs in 26.5 ms