Protein–RNA interactions for Protein: Q9Y5E2

PCDHB7, Protocadherin beta-7, humanhuman

Predictions only

Length 793 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHB7Q9Y5E2 OTOP3-201ENST00000328801 2363 ntAPPRIS P1 TSL 2 BASIC19.98■□□□□ 0.79
PCDHB7Q9Y5E2 DOCK9-206ENST00000427887 4176 ntTSL 1 (best) BASIC19.98■□□□□ 0.79
PCDHB7Q9Y5E2 HEIH-201ENST00000623091 1652 ntBASIC19.97■□□□□ 0.79
PCDHB7Q9Y5E2 AL353692.3-201ENST00000407031 1396 ntBASIC19.97■□□□□ 0.79
PCDHB7Q9Y5E2 ABHD14B-204ENST00000461108 1397 ntTSL 2 BASIC19.97■□□□□ 0.79
PCDHB7Q9Y5E2 MAGEA6-201ENST00000329342 1740 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
PCDHB7Q9Y5E2 MAGEA3-201ENST00000370278 1724 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
PCDHB7Q9Y5E2 TMEM250-205ENST00000561457 2804 ntAPPRIS P1 TSL 2 BASIC19.97■□□□□ 0.79
PCDHB7Q9Y5E2 SNX19-209ENST00000530356 1562 ntTSL 2 BASIC19.97■□□□□ 0.79
PCDHB7Q9Y5E2 DPF1-217ENST00000614244 2356 ntTSL 1 (best) BASIC19.97■□□□□ 0.79
PCDHB7Q9Y5E2 LCE1F-201ENST00000334371 357 ntAPPRIS P1 BASIC19.97■□□□□ 0.79
PCDHB7Q9Y5E2 MRPL43-208ENST00000370242 884 ntTSL 2 BASIC19.97■□□□□ 0.79
PCDHB7Q9Y5E2 CRELD2-202ENST00000403427 1242 ntTSL 1 (best) BASIC19.97■□□□□ 0.79
PCDHB7Q9Y5E2 AL137026.1-202ENST00000452578 1089 ntTSL 2 BASIC19.97■□□□□ 0.79
PCDHB7Q9Y5E2 RN7SL606P-201ENST00000472779 293 ntBASIC19.97■□□□□ 0.79
PCDHB7Q9Y5E2 RPS15A-205ENST00000565420 802 ntAPPRIS P1 TSL 2 BASIC19.97■□□□□ 0.79
PCDHB7Q9Y5E2 AL449423.1-201ENST00000578935 435 ntTSL 3 BASIC19.97■□□□□ 0.79
PCDHB7Q9Y5E2 EEF1A1-203ENST00000331523 1923 ntAPPRIS P1 TSL 5 BASIC19.97■□□□□ 0.79
PCDHB7Q9Y5E2 SMIM4-203ENST00000477703 1770 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
PCDHB7Q9Y5E2 C19orf25-202ENST00000436106 2403 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
PCDHB7Q9Y5E2 C2CD2-202ENST00000380486 6345 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
PCDHB7Q9Y5E2 PDLIM2-206ENST00000409141 1463 ntTSL 2 BASIC19.97■□□□□ 0.79
PCDHB7Q9Y5E2 KRT89P-201ENST00000620027 1478 ntBASIC19.97■□□□□ 0.79
PCDHB7Q9Y5E2 GALNT10-202ENST00000377661 3778 ntTSL 5 BASIC19.97■□□□□ 0.79
PCDHB7Q9Y5E2 ATXN7L2-202ENST00000369870 2318 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
PCDHB7Q9Y5E2 CDK13-202ENST00000340829 5066 ntAPPRIS ALT1 TSL 1 (best) BASIC19.97■□□□□ 0.79
PCDHB7Q9Y5E2 ACTL6B-201ENST00000160382 1537 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
PCDHB7Q9Y5E2 AGER-205ENST00000375069 1538 ntTSL 1 (best) BASIC19.97■□□□□ 0.79
PCDHB7Q9Y5E2 EGFL7-204ENST00000406555 1529 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
PCDHB7Q9Y5E2 DIAPH1-203ENST00000389057 5762 ntAPPRIS ALT2 TSL 5 BASIC19.97■□□□□ 0.79
PCDHB7Q9Y5E2 LRRC45-201ENST00000306688 2701 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
PCDHB7Q9Y5E2 TFDP2-202ENST00000467072 1853 ntAPPRIS P3 TSL 1 (best) BASIC19.96■□□□□ 0.79
PCDHB7Q9Y5E2 ENGASE-205ENST00000579016 2579 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
PCDHB7Q9Y5E2 CPAMD8-202ENST00000388925 5355 ntTSL 5 BASIC19.96■□□□□ 0.79
PCDHB7Q9Y5E2 PRMT5-201ENST00000216350 2271 ntTSL 2 BASIC19.96■□□□□ 0.79
PCDHB7Q9Y5E2 ZNF420-201ENST00000304239 1945 ntTSL 2 BASIC19.96■□□□□ 0.79
PCDHB7Q9Y5E2 RREB1-201ENST00000334984 5789 ntAPPRIS ALT2 TSL 1 (best) BASIC19.96■□□□□ 0.79
PCDHB7Q9Y5E2 PAQR4-203ENST00000572687 2251 ntTSL 2 BASIC19.96■□□□□ 0.79
PCDHB7Q9Y5E2 FLT1-209ENST00000639477 6337 ntTSL 5 BASIC19.96■□□□□ 0.79
PCDHB7Q9Y5E2 TMEM44-204ENST00000392432 2490 ntTSL 1 (best) BASIC19.96■□□□□ 0.79
PCDHB7Q9Y5E2 CORO1A-216ENST00000570045 1622 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
PCDHB7Q9Y5E2 PODXL2-201ENST00000342480 2186 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
PCDHB7Q9Y5E2 DYNLL1-203ENST00000392509 814 ntAPPRIS P1 TSL 3 BASIC19.96■□□□□ 0.79
PCDHB7Q9Y5E2 RPL8-202ENST00000394920 965 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
PCDHB7Q9Y5E2 CYCS-202ENST00000409409 974 ntAPPRIS P1 TSL 3 BASIC19.96■□□□□ 0.79
PCDHB7Q9Y5E2 IGHV3-47-201ENST00000425060 335 ntBASIC19.96■□□□□ 0.79
PCDHB7Q9Y5E2 AL133343.2-201ENST00000457213 370 ntTSL 3 BASIC19.96■□□□□ 0.79
PCDHB7Q9Y5E2 BMF-207ENST00000559701 630 ntTSL 3 BASIC19.96■□□□□ 0.79
PCDHB7Q9Y5E2 LAT-211ENST00000566177 786 ntAPPRIS ALT2 TSL 1 (best) BASIC19.96■□□□□ 0.79
PCDHB7Q9Y5E2 AC003688.1-201ENST00000577138 489 ntAPPRIS P1 TSL 3 BASIC19.96■□□□□ 0.79
PCDHB7Q9Y5E2 GXYLT1P4-201ENST00000613576 1192 ntBASIC19.96■□□□□ 0.79
PCDHB7Q9Y5E2 AL162497.1-201ENST00000615635 518 ntTSL 4 BASIC19.96■□□□□ 0.79
PCDHB7Q9Y5E2 CDK2AP1-207ENST00000618072 1144 ntTSL 3 BASIC19.96■□□□□ 0.79
PCDHB7Q9Y5E2 MALAT1-215ENST00000619449 794 ntTSL 3 BASIC19.96■□□□□ 0.79
PCDHB7Q9Y5E2 HSP90B1-211ENST00000640977 1127 ntTSL 5 BASIC19.96■□□□□ 0.79
PCDHB7Q9Y5E2 EEF1AKMT2-201ENST00000368836 1462 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
PCDHB7Q9Y5E2 RELB-207ENST00000625761 2279 ntAPPRIS ALT2 TSL 5 BASIC19.96■□□□□ 0.79
PCDHB7Q9Y5E2 KANK3-203ENST00000593649 2672 ntAPPRIS ALT2 TSL 1 (best) BASIC19.96■□□□□ 0.79
PCDHB7Q9Y5E2 UTP4-201ENST00000314423 2322 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
PCDHB7Q9Y5E2 CADPS2-208ENST00000615869 6066 ntAPPRIS ALT1 TSL 5 BASIC19.96■□□□□ 0.79
PCDHB7Q9Y5E2 KRT8P50-201ENST00000562022 1438 ntBASIC19.95■□□□□ 0.78
PCDHB7Q9Y5E2 ARHGAP11A-205ENST00000563864 2279 ntTSL 5 BASIC19.95■□□□□ 0.78
PCDHB7Q9Y5E2 ROCK2-202ENST00000315872 8292 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
PCDHB7Q9Y5E2 DMD-208ENST00000378680 1858 ntTSL 1 (best) BASIC19.95■□□□□ 0.78
PCDHB7Q9Y5E2 LIMS2-204ENST00000409286 1678 ntTSL 2 BASIC19.95■□□□□ 0.78
PCDHB7Q9Y5E2 CHST1-201ENST00000308064 2718 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
PCDHB7Q9Y5E2 ATP5J-201ENST00000284971 614 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
PCDHB7Q9Y5E2 NPFFR2-202ENST00000344413 1234 ntTSL 1 (best) BASIC19.95■□□□□ 0.78
PCDHB7Q9Y5E2 CD1E-203ENST00000368156 861 ntTSL 1 (best) BASIC19.95■□□□□ 0.78
PCDHB7Q9Y5E2 CDKN1C-201ENST00000380725 1220 ntAPPRIS ALT2 TSL 2 BASIC19.95■□□□□ 0.78
PCDHB7Q9Y5E2 HMGN1-203ENST00000380748 829 ntTSL 3 BASIC19.95■□□□□ 0.78
PCDHB7Q9Y5E2 GALNT13-201ENST00000392825 5536 ntAPPRIS P1 TSL 2 BASIC19.95■□□□□ 0.78
PCDHB7Q9Y5E2 BID-204ENST00000399767 2129 ntTSL 2 BASIC19.95■□□□□ 0.78
PCDHB7Q9Y5E2 EEF1E1-202ENST00000429723 562 ntTSL 3 BASIC19.95■□□□□ 0.78
PCDHB7Q9Y5E2 AC092159.3-201ENST00000439196 571 ntTSL 4 BASIC19.95■□□□□ 0.78
PCDHB7Q9Y5E2 DMKN-215ENST00000451297 1111 ntAPPRIS ALT2 TSL 1 (best) BASIC19.95■□□□□ 0.78
PCDHB7Q9Y5E2 RPP14-206ENST00000466547 805 ntAPPRIS P1 TSL 3 BASIC19.95■□□□□ 0.78
PCDHB7Q9Y5E2 PIGQ-209ENST00000470411 2112 ntTSL 1 (best) BASIC19.95■□□□□ 0.78
PCDHB7Q9Y5E2 NOP16-205ENST00000509257 1000 ntTSL 2 BASIC19.95■□□□□ 0.78
PCDHB7Q9Y5E2 PLPP5-214ENST00000531823 875 ntTSL 3 BASIC19.95■□□□□ 0.78
PCDHB7Q9Y5E2 HDDC3-205ENST00000559898 1024 ntTSL 1 (best) BASIC19.95■□□□□ 0.78
PCDHB7Q9Y5E2 AL353801.3-201ENST00000609898 542 ntBASIC19.95■□□□□ 0.78
PCDHB7Q9Y5E2 LINC01714-202ENST00000635451 896 ntTSL 5 BASIC19.95■□□□□ 0.78
PCDHB7Q9Y5E2 RPS6KL1-216ENST00000557413 2425 ntAPPRIS P1 TSL 5 BASIC19.95■□□□□ 0.78
PCDHB7Q9Y5E2 CACNA1I-204ENST00000407673 5952 ntAPPRIS ALT2 TSL 1 (best) BASIC19.95■□□□□ 0.78
PCDHB7Q9Y5E2 MFSD10-202ENST00000355443 1753 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
PCDHB7Q9Y5E2 CRTC1-204ENST00000601916 1834 ntTSL 5 BASIC19.95■□□□□ 0.78
PCDHB7Q9Y5E2 GGT6-202ENST00000381550 2145 ntTSL 2 BASIC19.94■□□□□ 0.78
PCDHB7Q9Y5E2 GNAI1-201ENST00000351004 3347 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
PCDHB7Q9Y5E2 CFC1-203ENST00000621673 1444 ntTSL 2 BASIC19.94■□□□□ 0.78
PCDHB7Q9Y5E2 AL032819.2-201ENST00000624543 2162 ntBASIC19.94■□□□□ 0.78
PCDHB7Q9Y5E2 LINC01123-202ENST00000419296 2436 ntTSL 2 BASIC19.94■□□□□ 0.78
PCDHB7Q9Y5E2 CD81-AS1-201ENST00000413483 1460 ntTSL 2 BASIC19.94■□□□□ 0.78
PCDHB7Q9Y5E2 C7orf49-202ENST00000424142 1738 ntTSL 2 BASIC19.94■□□□□ 0.78
PCDHB7Q9Y5E2 SPIN2B-202ENST00000333933 1258 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
PCDHB7Q9Y5E2 ELK1-202ENST00000343894 736 ntAPPRIS ALT2 TSL 1 (best) BASIC19.94■□□□□ 0.78
PCDHB7Q9Y5E2 C1orf43-204ENST00000368518 1278 ntTSL 1 (best) BASIC19.94■□□□□ 0.78
PCDHB7Q9Y5E2 BOLA1-201ENST00000369150 811 ntAPPRIS P1 TSL 3 BASIC19.94■□□□□ 0.78
PCDHB7Q9Y5E2 C7orf34-201ENST00000409607 766 ntAPPRIS P2 TSL 1 (best) BASIC19.94■□□□□ 0.78
PCDHB7Q9Y5E2 VEGFA-222ENST00000520948 1199 ntTSL 1 (best) BASIC19.94■□□□□ 0.78
Retrieved 100 of 98,524 protein–RNA pairs in 25.6 ms