Protein–RNA interactions for Protein: Q9UQ90

SPG7, Paraplegin, humanhuman

Predictions only

Length 795 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SPG7Q9UQ90 MFSD10-202ENST00000355443 1753 ntAPPRIS P1 TSL 1 (best) BASIC24.25■■□□□ 1.47
SPG7Q9UQ90 SMIM4-203ENST00000477703 1770 ntAPPRIS P1 TSL 1 (best) BASIC24.25■■□□□ 1.47
SPG7Q9UQ90 C1orf43-204ENST00000368518 1278 ntTSL 1 (best) BASIC24.25■■□□□ 1.47
SPG7Q9UQ90 HYI-201ENST00000372425 1265 ntAPPRIS P1 TSL 1 (best) BASIC24.25■■□□□ 1.47
SPG7Q9UQ90 PAX3-208ENST00000409828 1254 ntTSL 1 (best) BASIC24.25■■□□□ 1.47
SPG7Q9UQ90 AC106795.1-205ENST00000512851 1056 ntBASIC24.25■■□□□ 1.47
SPG7Q9UQ90 FOXP3-205ENST00000518685 1213 ntTSL 1 (best) BASIC24.25■■□□□ 1.47
SPG7Q9UQ90 DEF8-228ENST00000610455 816 ntTSL 1 (best) BASIC24.25■■□□□ 1.47
SPG7Q9UQ90 ARHGAP22-204ENST00000417247 2340 ntTSL 2 BASIC24.25■■□□□ 1.47
SPG7Q9UQ90 AFG3L1P-217ENST00000557444 2447 ntBASIC24.25■■□□□ 1.47
SPG7Q9UQ90 EEF1A1-203ENST00000331523 1923 ntAPPRIS P1 TSL 5 BASIC24.25■■□□□ 1.47
SPG7Q9UQ90 UBE2E1-202ENST00000346855 1398 ntTSL 3 BASIC24.25■■□□□ 1.47
SPG7Q9UQ90 KCNH2-201ENST00000262186 4286 ntAPPRIS P1 TSL 1 (best) BASIC24.25■■□□□ 1.47
SPG7Q9UQ90 DIO1-201ENST00000322679 1658 ntTSL 1 (best) BASIC24.24■■□□□ 1.47
SPG7Q9UQ90 DIO1-217ENST00000617230 1656 ntTSL 5 BASIC24.24■■□□□ 1.47
SPG7Q9UQ90 CCSAP-203ENST00000366687 5089 ntAPPRIS P1 TSL 1 (best) BASIC24.24■■□□□ 1.47
SPG7Q9UQ90 STX5-202ENST00000377897 1785 ntTSL 1 (best) BASIC24.24■■□□□ 1.47
SPG7Q9UQ90 EDC3-214ENST00000568176 1825 ntAPPRIS P1 TSL 1 (best) BASIC24.24■■□□□ 1.47
SPG7Q9UQ90 FER1L4-211ENST00000616283 1818 ntTSL 1 (best) BASIC24.24■■□□□ 1.47
SPG7Q9UQ90 CD320-201ENST00000301458 1250 ntAPPRIS P1 TSL 1 (best) BASIC24.24■■□□□ 1.47
SPG7Q9UQ90 GNG5-202ENST00000370645 790 ntAPPRIS P1 TSL 2 BASIC24.24■■□□□ 1.47
SPG7Q9UQ90 GGT6-202ENST00000381550 2145 ntTSL 2 BASIC24.24■■□□□ 1.47
SPG7Q9UQ90 BARHL1-202ENST00000542090 1197 ntAPPRIS P1 TSL 1 (best) BASIC24.24■■□□□ 1.47
SPG7Q9UQ90 SLC25A6P4-201ENST00000586535 553 ntBASIC24.24■■□□□ 1.47
SPG7Q9UQ90 CALM3-211ENST00000598871 561 ntTSL 4 BASIC24.24■■□□□ 1.47
SPG7Q9UQ90 CABP4-202ENST00000438189 1426 ntTSL 1 (best) BASIC24.24■■□□□ 1.47
SPG7Q9UQ90 MRGPRF-AS1-201ENST00000538407 1490 ntTSL 1 (best) BASIC24.24■■□□□ 1.47
SPG7Q9UQ90 ESR2-212ENST00000556275 2695 ntTSL 2 BASIC24.24■■□□□ 1.47
SPG7Q9UQ90 ZNF655-202ENST00000320583 1601 ntTSL 1 (best) BASIC24.24■■□□□ 1.47
SPG7Q9UQ90 CORO1A-216ENST00000570045 1622 ntAPPRIS P1 TSL 1 (best) BASIC24.24■■□□□ 1.47
SPG7Q9UQ90 MLST8-232ENST00000569417 1870 ntAPPRIS P3 TSL 1 (best) BASIC24.24■■□□□ 1.47
SPG7Q9UQ90 STX8-201ENST00000306357 1246 ntAPPRIS P1 TSL 1 (best) BASIC24.23■■□□□ 1.47
SPG7Q9UQ90 IGF2-202ENST00000381392 1005 ntAPPRIS ALT1 TSL 1 (best) BASIC24.23■■□□□ 1.47
SPG7Q9UQ90 LINC01237-203ENST00000430555 843 ntTSL 4 BASIC24.23■■□□□ 1.47
SPG7Q9UQ90 KRT18P41-201ENST00000518924 1277 ntBASIC24.23■■□□□ 1.47
SPG7Q9UQ90 ABR-204ENST00000543210 1049 ntTSL 2 BASIC24.23■■□□□ 1.47
SPG7Q9UQ90 MRPL52-210ENST00000555345 895 ntTSL 2 BASIC24.23■■□□□ 1.47
SPG7Q9UQ90 AC092118.1-202ENST00000568697 718 ntTSL 3 BASIC24.23■■□□□ 1.47
SPG7Q9UQ90 ABR-217ENST00000572441 563 ntTSL 4 BASIC24.23■■□□□ 1.47
SPG7Q9UQ90 AP005901.3-202ENST00000581653 237 ntBASIC24.23■■□□□ 1.47
SPG7Q9UQ90 IZUMO4-213ENST00000620263 947 ntTSL 3 BASIC24.23■■□□□ 1.47
SPG7Q9UQ90 ZNF667-AS1-201ENST00000585445 1521 ntTSL 1 (best) BASIC24.23■■□□□ 1.47
SPG7Q9UQ90 ALDOA-212ENST00000564546 2104 ntAPPRIS P2 TSL 1 (best) BASIC24.23■■□□□ 1.47
SPG7Q9UQ90 ATXN7L2-202ENST00000369870 2318 ntAPPRIS P1 TSL 1 (best) BASIC24.23■■□□□ 1.47
SPG7Q9UQ90 ALDOA-221ENST00000566897 2448 ntAPPRIS P2 TSL 2 BASIC24.23■■□□□ 1.47
SPG7Q9UQ90 FGFR1-214ENST00000447712 5900 ntAPPRIS P3 TSL 1 (best) BASIC24.22■■□□□ 1.47
SPG7Q9UQ90 UBTD2-201ENST00000393792 3301 ntAPPRIS P1 TSL 1 (best) BASIC24.22■■□□□ 1.47
SPG7Q9UQ90 CCDC62-204ENST00000392441 2936 ntAPPRIS ALT2 TSL 5 BASIC24.22■■□□□ 1.47
SPG7Q9UQ90 ARHGAP11A-205ENST00000563864 2279 ntTSL 5 BASIC24.22■■□□□ 1.47
SPG7Q9UQ90 C2orf54-201ENST00000307486 2017 ntAPPRIS ALT2 TSL 1 (best) BASIC24.22■■□□□ 1.47
SPG7Q9UQ90 GPR146-201ENST00000397095 1969 ntAPPRIS P1 TSL 1 (best) BASIC24.22■■□□□ 1.47
SPG7Q9UQ90 ST3GAL4-209ENST00000526727 1967 ntAPPRIS ALT1 TSL 1 (best) BASIC24.22■■□□□ 1.47
SPG7Q9UQ90 PRR23B-201ENST00000329447 1896 ntAPPRIS P1 BASIC24.22■■□□□ 1.47
SPG7Q9UQ90 TFDP2-202ENST00000467072 1853 ntAPPRIS P3 TSL 1 (best) BASIC24.22■■□□□ 1.47
SPG7Q9UQ90 CRTC1-204ENST00000601916 1834 ntTSL 5 BASIC24.22■■□□□ 1.47
SPG7Q9UQ90 FBRS-202ENST00000356166 5200 ntTSL 5 BASIC24.22■■□□□ 1.47
SPG7Q9UQ90 C7orf49-202ENST00000424142 1738 ntTSL 2 BASIC24.22■■□□□ 1.47
SPG7Q9UQ90 LIMS2-204ENST00000409286 1678 ntTSL 2 BASIC24.22■■□□□ 1.47
SPG7Q9UQ90 TICAM1-202ENST00000621756 1650 ntTSL 5 BASIC24.22■■□□□ 1.47
SPG7Q9UQ90 VPS26B-202ENST00000525095 1558 ntAPPRIS P1 TSL 5 BASIC24.22■■□□□ 1.47
SPG7Q9UQ90 IFNLR1-205ENST00000374421 1476 ntAPPRIS ALT2 TSL 1 (best) BASIC24.22■■□□□ 1.47
SPG7Q9UQ90 CDK2AP2-201ENST00000301488 1378 ntAPPRIS P1 TSL 1 (best) BASIC24.22■■□□□ 1.47
SPG7Q9UQ90 TMEM14A-201ENST00000211314 992 ntAPPRIS P1 TSL 1 (best) BASIC24.22■■□□□ 1.47
SPG7Q9UQ90 AP000593.1-201ENST00000393668 712 ntBASIC24.22■■□□□ 1.47
SPG7Q9UQ90 RNF144A-AS1-205ENST00000439208 757 ntTSL 3 BASIC24.22■■□□□ 1.47
SPG7Q9UQ90 AL662844.1-201ENST00000546340 181 ntBASIC24.22■■□□□ 1.47
SPG7Q9UQ90 AC099518.3-201ENST00000564808 809 ntAPPRIS P5 TSL 4 BASIC24.22■■□□□ 1.47
SPG7Q9UQ90 CTDNEP1-207ENST00000572043 857 ntTSL 3 BASIC24.22■■□□□ 1.47
SPG7Q9UQ90 BCL2L12-210ENST00000611631 1259 ntTSL 1 (best) BASIC24.22■■□□□ 1.47
SPG7Q9UQ90 ISG15-203ENST00000624697 788 ntAPPRIS ALT2 TSL 3 BASIC24.22■■□□□ 1.47
SPG7Q9UQ90 CCNC-219ENST00000627680 896 ntTSL 5 BASIC24.22■■□□□ 1.47
SPG7Q9UQ90 UBE2Z-201ENST00000360943 3122 ntAPPRIS P1 TSL 1 (best) BASIC24.22■■□□□ 1.47
SPG7Q9UQ90 LGI3-202ENST00000424267 3114 ntTSL 1 (best) BASIC24.22■■□□□ 1.47
SPG7Q9UQ90 CNNM4-201ENST00000377075 4800 ntAPPRIS P1 TSL 1 (best) BASIC24.22■■□□□ 1.47
SPG7Q9UQ90 ENGASE-205ENST00000579016 2579 ntAPPRIS P1 TSL 1 (best) BASIC24.22■■□□□ 1.47
SPG7Q9UQ90 DMD-208ENST00000378680 1858 ntTSL 1 (best) BASIC24.21■■□□□ 1.47
SPG7Q9UQ90 WAS-201ENST00000376701 1849 ntAPPRIS P1 TSL 1 (best) BASIC24.21■■□□□ 1.47
SPG7Q9UQ90 LYPD3-201ENST00000244333 1694 ntAPPRIS P1 TSL 1 (best) BASIC24.21■■□□□ 1.47
SPG7Q9UQ90 NFYC-AS1-201ENST00000606277 1687 ntBASIC24.21■■□□□ 1.47
SPG7Q9UQ90 SLC25A22-228ENST00000628067 2692 ntAPPRIS P1 TSL 1 (best) BASIC24.21■■□□□ 1.47
SPG7Q9UQ90 MTMR9LP-203ENST00000426597 1545 ntBASIC24.21■■□□□ 1.47
SPG7Q9UQ90 ACD-215ENST00000620761 1483 ntAPPRIS ALT2 TSL 1 (best) BASIC24.21■■□□□ 1.47
SPG7Q9UQ90 C19orf25-202ENST00000436106 2403 ntAPPRIS P1 TSL 1 (best) BASIC24.21■■□□□ 1.47
SPG7Q9UQ90 OTOP3-201ENST00000328801 2363 ntAPPRIS P1 TSL 2 BASIC24.21■■□□□ 1.47
SPG7Q9UQ90 CD209-210ENST00000601951 1439 ntAPPRIS ALT2 TSL 1 (best) BASIC24.21■■□□□ 1.47
SPG7Q9UQ90 ID2-202ENST00000331129 623 ntAPPRIS P1 TSL 1 (best) BASIC24.21■■□□□ 1.47
SPG7Q9UQ90 BEX4-201ENST00000372691 1066 ntAPPRIS P1 TSL 2 BASIC24.21■■□□□ 1.47
SPG7Q9UQ90 HES2-202ENST00000377836 507 ntTSL 2 BASIC24.21■■□□□ 1.47
SPG7Q9UQ90 AC091607.1-201ENST00000490318 1060 ntBASIC24.21■■□□□ 1.47
SPG7Q9UQ90 CDV3-207ENST00000508481 661 ntTSL 3 BASIC24.21■■□□□ 1.47
SPG7Q9UQ90 AC099805.1-202ENST00000519927 1057 ntTSL 5 BASIC24.21■■□□□ 1.47
SPG7Q9UQ90 AC011840.4-201ENST00000578471 627 ntBASIC24.21■■□□□ 1.47
SPG7Q9UQ90 FCGRT-210ENST00000596975 1054 ntTSL 5 BASIC24.21■■□□□ 1.47
SPG7Q9UQ90 C6orf48-210ENST00000614363 748 ntAPPRIS P1 TSL 5 BASIC24.21■■□□□ 1.47
SPG7Q9UQ90 NSUN2-206ENST00000506139 2619 ntAPPRIS ALT2 TSL 2 BASIC24.21■■□□□ 1.47
SPG7Q9UQ90 SLC2A14-214ENST00000542505 1650 ntTSL 1 (best) BASIC24.21■■□□□ 1.47
SPG7Q9UQ90 RELB-207ENST00000625761 2279 ntAPPRIS ALT2 TSL 5 BASIC24.21■■□□□ 1.47
SPG7Q9UQ90 SPOCK3-204ENST00000502330 2180 ntAPPRIS ALT2 TSL 1 (best) BASIC24.2■■□□□ 1.47
SPG7Q9UQ90 AGAP4-207ENST00000616763 2784 ntAPPRIS ALT2 TSL 1 (best) BASIC24.2■■□□□ 1.47
SPG7Q9UQ90 AL163051.1-201ENST00000569214 1512 ntBASIC24.2■■□□□ 1.47
Retrieved 100 of 98,524 protein–RNA pairs in 34.6 ms