Protein–RNA interactions for Protein: Q9UKN5

PRDM4, PR domain zinc finger protein 4, humanhuman

Predictions only

Length 801 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PRDM4Q9UKN5 RPGRIP1-210ENST00000556336 2955 ntTSL 5 BASIC19.14■□□□□ 0.66
PRDM4Q9UKN5 ILVBL-201ENST00000263383 2304 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.66
PRDM4Q9UKN5 AXL-202ENST00000359092 3206 ntAPPRIS ALT2 TSL 1 (best) BASIC19.14■□□□□ 0.66
PRDM4Q9UKN5 ATP2B1-AS1-201ENST00000605386 3632 ntBASIC19.14■□□□□ 0.65
PRDM4Q9UKN5 NLE1-203ENST00000586869 5286 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
PRDM4Q9UKN5 USP25-204ENST00000400183 5341 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
PRDM4Q9UKN5 LRRD1-201ENST00000343318 2073 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
PRDM4Q9UKN5 SMPD3-211ENST00000568373 2073 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
PRDM4Q9UKN5 C2CD2-202ENST00000380486 6345 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
PRDM4Q9UKN5 ANO1-201ENST00000316296 2118 ntTSL 2 BASIC19.14■□□□□ 0.65
PRDM4Q9UKN5 MRPL14-201ENST00000372014 959 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
PRDM4Q9UKN5 RNF208-202ENST00000392827 1135 ntAPPRIS P1 TSL 5 BASIC19.14■□□□□ 0.65
PRDM4Q9UKN5 AC138907.5-202ENST00000569484 235 ntBASIC19.14■□□□□ 0.65
PRDM4Q9UKN5 TERF1P2-201ENST00000583350 1212 ntBASIC19.14■□□□□ 0.65
PRDM4Q9UKN5 AC008175.2-201ENST00000612840 297 ntBASIC19.14■□□□□ 0.65
PRDM4Q9UKN5 LINC00937-207ENST00000544461 3033 ntTSL 2 BASIC19.14■□□□□ 0.65
PRDM4Q9UKN5 WDR20-202ENST00000322340 3060 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
PRDM4Q9UKN5 KRT71-201ENST00000267119 2265 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
PRDM4Q9UKN5 HLA-G-204ENST00000376828 1490 ntAPPRIS ALT2 BASIC19.14■□□□□ 0.65
PRDM4Q9UKN5 NEURL3-204ENST00000451794 1461 ntAPPRIS P1 TSL 5 BASIC19.14■□□□□ 0.65
PRDM4Q9UKN5 CYLD-202ENST00000398568 3536 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
PRDM4Q9UKN5 NOC4L-201ENST00000330579 1632 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
PRDM4Q9UKN5 PLSCR3-201ENST00000324822 1689 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
PRDM4Q9UKN5 NDN-201ENST00000331837 1931 ntAPPRIS P1 BASIC19.13■□□□□ 0.65
PRDM4Q9UKN5 EMILIN2-201ENST00000254528 5910 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
PRDM4Q9UKN5 SH3GL1-206ENST00000598564 2194 ntTSL 2 BASIC19.13■□□□□ 0.65
PRDM4Q9UKN5 ORAOV1-201ENST00000279147 2478 ntAPPRIS P2 TSL 1 (best) BASIC19.13■□□□□ 0.65
PRDM4Q9UKN5 KCNQ2-202ENST00000344462 2750 ntAPPRIS ALT2 TSL 1 (best) BASIC19.13■□□□□ 0.65
PRDM4Q9UKN5 CHFR-204ENST00000443047 2990 ntTSL 2 BASIC19.13■□□□□ 0.65
PRDM4Q9UKN5 TXNDC11-202ENST00000356957 3178 ntAPPRIS ALT2 TSL 1 (best) BASIC19.13■□□□□ 0.65
PRDM4Q9UKN5 RARRES2-201ENST00000223271 740 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
PRDM4Q9UKN5 RAMP1-203ENST00000404910 857 ntTSL 2 BASIC19.13■□□□□ 0.65
PRDM4Q9UKN5 STOX2-205ENST00000513034 807 ntTSL 3 BASIC19.13■□□□□ 0.65
PRDM4Q9UKN5 ZNF436-AS1-206ENST00000518821 461 ntTSL 2 BASIC19.13■□□□□ 0.65
PRDM4Q9UKN5 KRT18P20-201ENST00000548986 1279 ntBASIC19.13■□□□□ 0.65
PRDM4Q9UKN5 SLC35A3-213ENST00000638988 1286 ntTSL 5 BASIC19.13■□□□□ 0.65
PRDM4Q9UKN5 AP004608.1-201ENST00000531319 1402 ntTSL 2 BASIC19.13■□□□□ 0.65
PRDM4Q9UKN5 DHRS2-201ENST00000250383 1705 ntAPPRIS P3 TSL 1 (best) BASIC19.13■□□□□ 0.65
PRDM4Q9UKN5 IKZF1-209ENST00000438033 1748 ntTSL 2 BASIC19.13■□□□□ 0.65
PRDM4Q9UKN5 GUCA1A-201ENST00000053469 1874 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
PRDM4Q9UKN5 SLC25A45-201ENST00000294187 2196 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
PRDM4Q9UKN5 AL603756.1-201ENST00000606511 2163 ntBASIC19.13■□□□□ 0.65
PRDM4Q9UKN5 PLEKHB1-202ENST00000354190 2380 ntAPPRIS P4 TSL 1 (best) BASIC19.13■□□□□ 0.65
PRDM4Q9UKN5 MIB2-217ENST00000504599 3311 ntAPPRIS ALT2 TSL 2 BASIC19.13■□□□□ 0.65
PRDM4Q9UKN5 PICALM-204ENST00000526033 3613 ntAPPRIS ALT1 TSL 1 (best) BASIC19.13■□□□□ 0.65
PRDM4Q9UKN5 PTBP1-202ENST00000350092 3069 ntAPPRIS ALT1 TSL 1 (best) BASIC19.12■□□□□ 0.65
PRDM4Q9UKN5 TRIM46-210ENST00000545012 2979 ntTSL 2 BASIC19.12■□□□□ 0.65
PRDM4Q9UKN5 ITGB7-201ENST00000267082 2867 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
PRDM4Q9UKN5 CREB3L3-201ENST00000078445 2618 ntAPPRIS P3 TSL 1 (best) BASIC19.12■□□□□ 0.65
PRDM4Q9UKN5 WDR20-211ENST00000556807 2382 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
PRDM4Q9UKN5 DFNA5-203ENST00000409970 2005 ntTSL 5 BASIC19.12■□□□□ 0.65
PRDM4Q9UKN5 SF3A2-201ENST00000221494 1963 ntAPPRIS P2 TSL 1 (best) BASIC19.12■□□□□ 0.65
PRDM4Q9UKN5 ZNF79-204ENST00000617266 1969 ntTSL 3 BASIC19.12■□□□□ 0.65
PRDM4Q9UKN5 PAOX-201ENST00000278060 1858 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
PRDM4Q9UKN5 HLA-A-204ENST00000396634 1868 ntAPPRIS P1 BASIC19.12■□□□□ 0.65
PRDM4Q9UKN5 CD37-204ENST00000535669 1674 ntTSL 2 BASIC19.12■□□□□ 0.65
PRDM4Q9UKN5 RAP1B-202ENST00000341355 714 ntAPPRIS P1 TSL 3 BASIC19.12■□□□□ 0.65
PRDM4Q9UKN5 C19orf12-205ENST00000392278 895 ntTSL 2 BASIC19.12■□□□□ 0.65
PRDM4Q9UKN5 RALGDS-205ENST00000393160 3801 ntAPPRIS ALT2 TSL 1 (best) BASIC19.12■□□□□ 0.65
PRDM4Q9UKN5 FAXDC2-211ENST00000520968 558 ntTSL 4 BASIC19.12■□□□□ 0.65
PRDM4Q9UKN5 FP565260.3-201ENST00000612610 1162 ntAPPRIS P5 TSL 1 (best) BASIC19.12■□□□□ 0.65
PRDM4Q9UKN5 ANKMY1-207ENST00000403283 2874 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
PRDM4Q9UKN5 SMURF1-202ENST00000361368 5581 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
PRDM4Q9UKN5 SLC18B1-201ENST00000275227 2368 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
PRDM4Q9UKN5 ORAOV1-206ENST00000536870 2274 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
PRDM4Q9UKN5 RELA-226ENST00000612991 2266 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
PRDM4Q9UKN5 MAP1S-201ENST00000324096 3419 ntAPPRIS P3 TSL 1 (best) BASIC19.12■□□□□ 0.65
PRDM4Q9UKN5 PRODH-205ENST00000420436 2034 ntAPPRIS ALT2 TSL 2 BASIC19.12■□□□□ 0.65
PRDM4Q9UKN5 ADGRE2-208ENST00000595839 2046 ntTSL 5 BASIC19.12■□□□□ 0.65
PRDM4Q9UKN5 NFIA-205ENST00000371189 1989 ntTSL 2 BASIC19.12■□□□□ 0.65
PRDM4Q9UKN5 CASC2-203ENST00000435944 3270 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
PRDM4Q9UKN5 NIPAL2-201ENST00000341166 4581 ntTSL 2 BASIC19.12■□□□□ 0.65
PRDM4Q9UKN5 CFL1-203ENST00000525451 1878 ntAPPRIS P1 TSL 2 BASIC19.11■□□□□ 0.65
PRDM4Q9UKN5 SLC26A11-212ENST00000572725 1862 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
PRDM4Q9UKN5 ZFC3H1-206ENST00000548100 1771 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
PRDM4Q9UKN5 ST6GALNAC4-201ENST00000335791 1691 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
PRDM4Q9UKN5 MBP-202ENST00000355994 2772 ntTSL 5 BASIC19.11■□□□□ 0.65
PRDM4Q9UKN5 ACTL6B-201ENST00000160382 1537 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
PRDM4Q9UKN5 VPS29-206ENST00000549578 1523 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
PRDM4Q9UKN5 DMPK-202ENST00000343373 3227 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
PRDM4Q9UKN5 HOTTIP-202ENST00000472494 2285 ntTSL 2 BASIC19.11■□□□□ 0.65
PRDM4Q9UKN5 TALDO1-201ENST00000319006 1346 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
PRDM4Q9UKN5 SEPT11-201ENST00000264893 5593 ntAPPRIS P2 TSL 1 (best) BASIC19.11■□□□□ 0.65
PRDM4Q9UKN5 ARHGEF1-204ENST00000378152 2986 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
PRDM4Q9UKN5 MOSPD3-203ENST00000393950 1191 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
PRDM4Q9UKN5 AC092468.1-201ENST00000491321 562 ntTSL 4 BASIC19.11■□□□□ 0.65
PRDM4Q9UKN5 BEX2-204ENST00000536889 1077 ntTSL 2 BASIC19.11■□□□□ 0.65
PRDM4Q9UKN5 INO80E-207ENST00000563197 2103 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
PRDM4Q9UKN5 LGI4-206ENST00000591633 1113 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
PRDM4Q9UKN5 AL512625.3-202ENST00000591993 1091 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
PRDM4Q9UKN5 APOC3-205ENST00000630701 541 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
PRDM4Q9UKN5 AC092384.3-202ENST00000564646 2873 ntBASIC19.11■□□□□ 0.65
PRDM4Q9UKN5 LUC7L3-201ENST00000240304 1972 ntAPPRIS P1 TSL 2 BASIC19.11■□□□□ 0.65
PRDM4Q9UKN5 GRAP-201ENST00000284154 2651 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
PRDM4Q9UKN5 ZGPAT-202ENST00000355969 1871 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
PRDM4Q9UKN5 SYTL3-202ENST00000360448 2504 ntAPPRIS ALT1 TSL 5 BASIC19.11■□□□□ 0.65
PRDM4Q9UKN5 MYADML2-201ENST00000409745 2452 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
PRDM4Q9UKN5 LGR6-205ENST00000439764 2487 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
PRDM4Q9UKN5 JKAMP-201ENST00000261247 1726 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
PRDM4Q9UKN5 UBE2I-205ENST00000402301 1708 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
Retrieved 100 of 98,524 protein–RNA pairs in 39.1 ms