Protein–RNA interactions for Protein: Q9UHX1

PUF60, Poly(U)-binding-splicing factor PUF60, humanhuman

Known RBP Predictions only

Length 559 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PUF60Q9UHX1 TSPY17P-201ENST00000450329 467 ntBASIC20.8■□□□□ 0.92
PUF60Q9UHX1 PSMB5-205ENST00000493471 1117 ntTSL 1 (best) BASIC20.8■□□□□ 0.92
PUF60Q9UHX1 TMEM249-203ENST00000565365 975 ntAPPRIS P2 TSL 3 BASIC20.8■□□□□ 0.92
PUF60Q9UHX1 MED9-202ENST00000580462 565 ntTSL 1 (best) BASIC20.8■□□□□ 0.92
PUF60Q9UHX1 AL358472.4-201ENST00000633140 710 ntBASIC20.8■□□□□ 0.92
PUF60Q9UHX1 REEP2-201ENST00000254901 2099 ntAPPRIS P3 TSL 1 (best) BASIC20.8■□□□□ 0.92
PUF60Q9UHX1 GRM2-204ENST00000442933 2064 ntTSL 5 BASIC20.8■□□□□ 0.92
PUF60Q9UHX1 KMT5B-206ENST00000405515 2869 ntTSL 5 BASIC20.8■□□□□ 0.92
PUF60Q9UHX1 FAM187A-202ENST00000412523 1748 ntTSL 1 (best) BASIC20.8■□□□□ 0.92
PUF60Q9UHX1 FO681492.1-203ENST00000622861 1362 ntAPPRIS ALT2 TSL 5 BASIC20.8■□□□□ 0.92
PUF60Q9UHX1 STOML1-209ENST00000564777 1849 ntTSL 1 (best) BASIC20.8■□□□□ 0.92
PUF60Q9UHX1 TMEM25-203ENST00000354284 1456 ntTSL 2 BASIC20.8■□□□□ 0.92
PUF60Q9UHX1 CHAC1-205ENST00000617961 1498 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
PUF60Q9UHX1 TBC1D4-204ENST00000431480 6347 ntAPPRIS ALT2 TSL 1 (best) BASIC20.8■□□□□ 0.92
PUF60Q9UHX1 TCP11-201ENST00000244645 2018 ntAPPRIS P3 TSL 1 (best) BASIC20.8■□□□□ 0.92
PUF60Q9UHX1 ANKRD10-201ENST00000267339 2495 ntAPPRIS P1 TSL 2 BASIC20.8■□□□□ 0.92
PUF60Q9UHX1 UBE2Q2-204ENST00000561851 1582 ntTSL 2 BASIC20.8■□□□□ 0.92
PUF60Q9UHX1 GGT6-202ENST00000381550 2145 ntTSL 2 BASIC20.8■□□□□ 0.92
PUF60Q9UHX1 COPS7A-215ENST00000543155 2127 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
PUF60Q9UHX1 ITGB7-209ENST00000550743 2138 ntTSL 5 BASIC20.8■□□□□ 0.92
PUF60Q9UHX1 KRT8P8-201ENST00000434750 1448 ntBASIC20.79■□□□□ 0.92
PUF60Q9UHX1 C11orf49-201ENST00000278460 1645 ntAPPRIS P3 TSL 1 (best) BASIC20.79■□□□□ 0.92
PUF60Q9UHX1 FAM46A-203ENST00000369756 5537 ntAPPRIS ALT2 TSL 1 (best) BASIC20.79■□□□□ 0.92
PUF60Q9UHX1 SLC38A11-203ENST00000409149 1621 ntAPPRIS P2 TSL 2 BASIC20.79■□□□□ 0.92
PUF60Q9UHX1 GMPPA-203ENST00000358215 1823 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
PUF60Q9UHX1 ACYP2-203ENST00000406041 1913 ntTSL 1 (best) BASIC20.79■□□□□ 0.92
PUF60Q9UHX1 FGFR3-202ENST00000340107 4293 ntAPPRIS ALT2 TSL 5 BASIC20.79■□□□□ 0.92
PUF60Q9UHX1 SLC23A3-201ENST00000295738 2037 ntTSL 1 (best) BASIC20.79■□□□□ 0.92
PUF60Q9UHX1 TMEM70-201ENST00000312184 2018 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
PUF60Q9UHX1 TYMSOS-201ENST00000323813 844 ntTSL 1 (best) BASIC20.79■□□□□ 0.92
PUF60Q9UHX1 EEF1D-202ENST00000395119 1249 ntAPPRIS ALT2 TSL 1 (best) BASIC20.79■□□□□ 0.92
PUF60Q9UHX1 MAP1LC3A-203ENST00000397709 698 ntAPPRIS P1 TSL 3 BASIC20.79■□□□□ 0.92
PUF60Q9UHX1 AC007563.2-201ENST00000447289 552 ntTSL 5 BASIC20.79■□□□□ 0.92
PUF60Q9UHX1 AC137630.1-201ENST00000452042 782 ntTSL 4 BASIC20.79■□□□□ 0.92
PUF60Q9UHX1 SSSCA1-206ENST00000531405 879 ntTSL 2 BASIC20.79■□□□□ 0.92
PUF60Q9UHX1 ULK4P3-205ENST00000568486 1158 ntTSL 1 (best) BASIC20.79■□□□□ 0.92
PUF60Q9UHX1 AL031432.5-201ENST00000641059 760 ntBASIC20.79■□□□□ 0.92
PUF60Q9UHX1 CCNL2-201ENST00000400809 2305 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
PUF60Q9UHX1 IFNLR1-202ENST00000327575 1476 ntAPPRIS ALT2 TSL 1 (best) BASIC20.79■□□□□ 0.92
PUF60Q9UHX1 ZNRF2-201ENST00000323037 3460 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
PUF60Q9UHX1 KLHL40-201ENST00000287777 2517 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
PUF60Q9UHX1 TRPM2-202ENST00000300482 5989 ntAPPRIS P3 TSL 1 (best) BASIC20.79■□□□□ 0.92
PUF60Q9UHX1 AC087457.1-201ENST00000503496 2727 ntTSL 2 BASIC20.79■□□□□ 0.92
PUF60Q9UHX1 SYTL1-210ENST00000616558 1878 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
PUF60Q9UHX1 B3GALNT1-202ENST00000392779 3221 ntAPPRIS P1 TSL 2 BASIC20.79■□□□□ 0.92
PUF60Q9UHX1 CHTOP-204ENST00000368694 2096 ntAPPRIS P3 TSL 1 (best) BASIC20.79■□□□□ 0.92
PUF60Q9UHX1 CEP85L-205ENST00000419517 2079 ntAPPRIS P3 TSL 1 (best) BASIC20.79■□□□□ 0.92
PUF60Q9UHX1 POMT2-201ENST00000261534 4876 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
PUF60Q9UHX1 TMEM8B-204ENST00000439587 2150 ntTSL 1 (best) BASIC20.79■□□□□ 0.92
PUF60Q9UHX1 NETO1-201ENST00000327305 3058 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
PUF60Q9UHX1 TMEM132A-201ENST00000005286 3480 ntAPPRIS P3 TSL 5 BASIC20.79■□□□□ 0.92
PUF60Q9UHX1 SLC25A41-201ENST00000321510 1532 ntAPPRIS P1 TSL 5 BASIC20.78■□□□□ 0.92
PUF60Q9UHX1 ASNS-206ENST00000437628 1638 ntTSL 2 BASIC20.78■□□□□ 0.92
PUF60Q9UHX1 KCNIP4-206ENST00000447367 1641 ntTSL 5 BASIC20.78■□□□□ 0.92
PUF60Q9UHX1 KRT5-201ENST00000252242 2531 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
PUF60Q9UHX1 PKP3-201ENST00000331563 2809 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
PUF60Q9UHX1 SLC35A3-217ENST00000639807 2767 ntTSL 5 BASIC20.78■□□□□ 0.92
PUF60Q9UHX1 HNRNPM-201ENST00000325495 2494 ntAPPRIS P4 TSL 1 (best) BASIC20.78■□□□□ 0.92
PUF60Q9UHX1 PCDHB18P-201ENST00000524813 2368 ntBASIC20.78■□□□□ 0.92
PUF60Q9UHX1 PDLIM4-201ENST00000253754 2282 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
PUF60Q9UHX1 AC006333.2-201ENST00000607957 2099 ntBASIC20.78■□□□□ 0.92
PUF60Q9UHX1 MRPL2-202ENST00000388752 1588 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
PUF60Q9UHX1 GMPPA-213ENST00000622191 1473 ntTSL 5 BASIC20.78■□□□□ 0.92
PUF60Q9UHX1 PLCB1-204ENST00000404098 1260 ntTSL 3 BASIC20.78■□□□□ 0.92
PUF60Q9UHX1 SHBG-203ENST00000416273 1042 ntAPPRIS ALT2 TSL 3 BASIC20.78■□□□□ 0.92
PUF60Q9UHX1 YBX1P2-201ENST00000489612 999 ntBASIC20.78■□□□□ 0.92
PUF60Q9UHX1 SHBG-215ENST00000575903 1196 ntTSL 3 BASIC20.78■□□□□ 0.92
PUF60Q9UHX1 AC009542.2-201ENST00000637483 1189 ntTSL 5 BASIC20.78■□□□□ 0.92
PUF60Q9UHX1 STX6-201ENST00000258301 4851 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
PUF60Q9UHX1 SGSM2-201ENST00000268989 4863 ntAPPRIS P3 TSL 1 (best) BASIC20.78■□□□□ 0.92
PUF60Q9UHX1 PTPA-201ENST00000337738 2845 ntTSL 2 BASIC20.78■□□□□ 0.92
PUF60Q9UHX1 ZNF274-203ENST00000424679 2539 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
PUF60Q9UHX1 DSCC1-201ENST00000313655 2314 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
PUF60Q9UHX1 TMEM91-209ENST00000539627 1843 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
PUF60Q9UHX1 ABI3-202ENST00000419580 1718 ntAPPRIS P1 TSL 5 BASIC20.78■□□□□ 0.92
PUF60Q9UHX1 KRT16-201ENST00000301653 1644 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
PUF60Q9UHX1 SLC25A29-215ENST00000556505 1540 ntTSL 2 BASIC20.78■□□□□ 0.92
PUF60Q9UHX1 CPZ-202ENST00000360986 2267 ntAPPRIS ALT2 TSL 1 (best) BASIC20.78■□□□□ 0.92
PUF60Q9UHX1 WAC-202ENST00000347934 2839 ntTSL 5 BASIC20.77■□□□□ 0.92
PUF60Q9UHX1 TMEM230-206ENST00000379283 1660 ntAPPRIS P1 TSL 3 BASIC20.77■□□□□ 0.92
PUF60Q9UHX1 KANK3-201ENST00000330915 2787 ntAPPRIS P2 TSL 1 (best) BASIC20.77■□□□□ 0.92
PUF60Q9UHX1 ZIC4-209ENST00000473123 1481 ntAPPRIS P1 TSL 2 BASIC20.77■□□□□ 0.92
PUF60Q9UHX1 AL031658.1-201ENST00000449519 2013 ntTSL 2 BASIC20.77■□□□□ 0.92
PUF60Q9UHX1 CD7-201ENST00000312648 1281 ntAPPRIS P2 TSL 1 (best) BASIC20.77■□□□□ 0.92
PUF60Q9UHX1 UQCRQ-201ENST00000378665 586 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
PUF60Q9UHX1 PSEN1-203ENST00000394157 1249 ntTSL 2 BASIC20.77■□□□□ 0.92
PUF60Q9UHX1 SURF4-206ENST00000485435 1206 ntTSL 1 (best) BASIC20.77■□□□□ 0.92
PUF60Q9UHX1 ZNF436-AS1-206ENST00000518821 461 ntTSL 2 BASIC20.77■□□□□ 0.92
PUF60Q9UHX1 ASRGL1-211ENST00000628829 1161 ntTSL 1 (best) BASIC20.77■□□□□ 0.92
PUF60Q9UHX1 NUDT15-201ENST00000258662 2098 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
PUF60Q9UHX1 AC135050.7-201ENST00000624508 2218 ntBASIC20.77■□□□□ 0.91
PUF60Q9UHX1 H1FNT-201ENST00000335017 1300 ntAPPRIS P1 BASIC20.77■□□□□ 0.91
PUF60Q9UHX1 EPHX1-201ENST00000272167 1660 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.91
PUF60Q9UHX1 KDM1A-202ENST00000400181 3059 ntAPPRIS ALT2 TSL 1 (best) BASIC20.76■□□□□ 0.91
PUF60Q9UHX1 NUAK1-201ENST00000261402 6828 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
PUF60Q9UHX1 AMACR-206ENST00000502637 1598 ntTSL 5 BASIC20.76■□□□□ 0.91
PUF60Q9UHX1 SKP2-208ENST00000546211 1589 ntTSL 5 BASIC20.76■□□□□ 0.91
PUF60Q9UHX1 DNAJC28-201ENST00000314399 1625 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
PUF60Q9UHX1 TRPT1-203ENST00000394547 865 ntTSL 1 (best) BASIC20.76■□□□□ 0.91
PUF60Q9UHX1 AC008771.1-201ENST00000508000 1151 ntTSL 2 BASIC20.76■□□□□ 0.91
Retrieved 100 of 98,524 protein–RNA pairs in 28.8 ms