Protein–RNA interactions for Protein: Q9P109

GCNT4, Beta-1,3-galactosyl-O-glycosyl-glycoprotein beta-1,6-N-acetylglucosaminyltransferase 4, humanhuman

Predictions only

Length 453 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GCNT4Q9P109 EXOSC3-201ENST00000327304 1806 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
GCNT4Q9P109 SLCO4A1-201ENST00000217159 2776 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
GCNT4Q9P109 TMTC1-203ENST00000539277 2758 ntAPPRIS P2 TSL 1 (best) BASIC20.24■□□□□ 0.83
GCNT4Q9P109 CADPS2-202ENST00000334010 6045 ntAPPRIS ALT2 TSL 5 BASIC20.24■□□□□ 0.83
GCNT4Q9P109 UBE3C-201ENST00000348165 5229 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
GCNT4Q9P109 KHDC1-202ENST00000370384 1430 ntAPPRIS ALT2 TSL 1 (best) BASIC20.24■□□□□ 0.83
GCNT4Q9P109 SIGIRR-202ENST00000397632 1598 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
GCNT4Q9P109 C5orf30-203ENST00000515669 1573 ntAPPRIS P1 TSL 3 BASIC20.24■□□□□ 0.83
GCNT4Q9P109 HERPUD2-201ENST00000311350 2474 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
GCNT4Q9P109 C16orf58-202ENST00000430477 2471 ntAPPRIS P2 TSL 1 (best) BASIC20.24■□□□□ 0.83
GCNT4Q9P109 UBXN2A-201ENST00000309033 6066 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
GCNT4Q9P109 SALRNA1-201ENST00000555871 2086 ntTSL 4 BASIC20.23■□□□□ 0.83
GCNT4Q9P109 MIDN-206ENST00000591446 3243 ntAPPRIS P2 TSL 1 (best) BASIC20.23■□□□□ 0.83
GCNT4Q9P109 OBSL1-203ENST00000373876 5503 ntTSL 5 BASIC20.23■□□□□ 0.83
GCNT4Q9P109 MYH7B-201ENST00000262873 6293 ntAPPRIS P2 TSL 1 (best) BASIC20.23■□□□□ 0.83
GCNT4Q9P109 NCF1-201ENST00000289473 1396 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
GCNT4Q9P109 GPAT2P1-201ENST00000444924 1672 ntBASIC20.23■□□□□ 0.83
GCNT4Q9P109 FDXR-214ENST00000581530 1827 ntAPPRIS P3 TSL 1 (best) BASIC20.23■□□□□ 0.83
GCNT4Q9P109 XYLT2-203ENST00000507602 2107 ntTSL 2 BASIC20.23■□□□□ 0.83
GCNT4Q9P109 RCAN3-205ENST00000436717 2574 ntTSL 3 BASIC20.23■□□□□ 0.83
GCNT4Q9P109 AC007613.1-201ENST00000572811 2597 ntBASIC20.23■□□□□ 0.83
GCNT4Q9P109 PLPPR2-208ENST00000591608 2552 ntAPPRIS ALT2 TSL 2 BASIC20.23■□□□□ 0.83
GCNT4Q9P109 PMEPA1-202ENST00000341744 4845 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
GCNT4Q9P109 BUB3-202ENST00000368859 667 ntTSL 3 BASIC20.23■□□□□ 0.83
GCNT4Q9P109 AC113347.1-201ENST00000413321 391 ntBASIC20.23■□□□□ 0.83
GCNT4Q9P109 CT47A1-201ENST00000433030 1288 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
GCNT4Q9P109 BCL7A-203ENST00000538010 6247 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
GCNT4Q9P109 PRR29-205ENST00000579184 1052 ntAPPRIS ALT2 TSL 2 BASIC20.23■□□□□ 0.83
GCNT4Q9P109 TWIST2-202ENST00000612363 1404 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
GCNT4Q9P109 AC092865.7-201ENST00000641832 219 ntBASIC20.23■□□□□ 0.83
GCNT4Q9P109 ANKS3-201ENST00000304283 2662 ntAPPRIS P1 TSL 2 BASIC20.23■□□□□ 0.83
GCNT4Q9P109 MAFF-207ENST00000538999 2365 ntTSL 2 BASIC20.23■□□□□ 0.83
GCNT4Q9P109 RNF170-205ENST00000526349 1338 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
GCNT4Q9P109 GCH1-207ENST00000622544 2923 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
GCNT4Q9P109 HOXB6-201ENST00000225648 1660 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
GCNT4Q9P109 LYPD3-201ENST00000244333 1694 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
GCNT4Q9P109 HNRNPM-201ENST00000325495 2494 ntAPPRIS P4 TSL 1 (best) BASIC20.22■□□□□ 0.83
GCNT4Q9P109 MSLN-202ENST00000545450 2162 ntAPPRIS ALT2 TSL 1 (best) BASIC20.22■□□□□ 0.83
GCNT4Q9P109 CLIP2-202ENST00000361545 5445 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
GCNT4Q9P109 SNX17-201ENST00000233575 2044 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
GCNT4Q9P109 RNH1-201ENST00000354420 1894 ntAPPRIS P1 TSL 5 BASIC20.22■□□□□ 0.83
GCNT4Q9P109 UBE2QL1-201ENST00000399816 4317 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
GCNT4Q9P109 PLEKHG5-207ENST00000400913 4698 ntAPPRIS P3 TSL 5 BASIC20.22■□□□□ 0.83
GCNT4Q9P109 MAP4K4-204ENST00000350198 7316 ntTSL 5 BASIC20.22■□□□□ 0.83
GCNT4Q9P109 DNM1-211ENST00000627061 2724 ntTSL 5 BASIC20.22■□□□□ 0.83
GCNT4Q9P109 SMARCD1-201ENST00000381513 3237 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
GCNT4Q9P109 PTTG1IP-203ENST00000397887 2413 ntTSL 4 BASIC20.22■□□□□ 0.83
GCNT4Q9P109 KRT8P45-201ENST00000414328 1447 ntBASIC20.22■□□□□ 0.83
GCNT4Q9P109 AK1-203ENST00000373176 2266 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
GCNT4Q9P109 FAM182B-202ENST00000376404 456 ntAPPRIS ALT2 BASIC20.22■□□□□ 0.83
GCNT4Q9P109 AL023284.2-201ENST00000405850 579 ntBASIC20.22■□□□□ 0.83
GCNT4Q9P109 TMA16-209ENST00000513272 803 ntTSL 2 BASIC20.22■□□□□ 0.83
GCNT4Q9P109 CLN3-206ENST00000360019 1840 ntTSL 2 BASIC20.22■□□□□ 0.83
GCNT4Q9P109 GALNT2-201ENST00000366672 4454 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
GCNT4Q9P109 PLA2G2F-201ENST00000375102 2723 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
GCNT4Q9P109 KCNQ2-218ENST00000629676 2399 ntTSL 5 BASIC20.22■□□□□ 0.83
GCNT4Q9P109 HOXC11-201ENST00000243082 2039 ntTSL 3 BASIC20.22■□□□□ 0.83
GCNT4Q9P109 CDK4-202ENST00000312990 1650 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
GCNT4Q9P109 SLC2A14-214ENST00000542505 1650 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
GCNT4Q9P109 KIAA1324L-208ENST00000450689 6841 ntAPPRIS ALT2 TSL 5 BASIC20.22■□□□□ 0.83
GCNT4Q9P109 ASZ1-201ENST00000284629 1865 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
GCNT4Q9P109 SRMS-201ENST00000217188 1516 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
GCNT4Q9P109 TFCP2-205ENST00000549867 1727 ntTSL 5 BASIC20.22■□□□□ 0.83
GCNT4Q9P109 CCDC50-202ENST00000392456 2454 ntAPPRIS P4 TSL 1 (best) BASIC20.21■□□□□ 0.83
GCNT4Q9P109 AATF-208ENST00000619387 2141 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
GCNT4Q9P109 GNAS-AS1-202ENST00000443966 2341 ntTSL 5 BASIC20.21■□□□□ 0.83
GCNT4Q9P109 LINC00461-203ENST00000504246 2300 ntTSL 2 BASIC20.21■□□□□ 0.83
GCNT4Q9P109 SLC29A4-202ENST00000396872 5685 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
GCNT4Q9P109 BICD1-207ENST00000551848 1962 ntBASIC20.21■□□□□ 0.83
GCNT4Q9P109 AC073508.3-201ENST00000619697 1419 ntBASIC20.21■□□□□ 0.83
GCNT4Q9P109 AC007743.1-203ENST00000447423 1623 ntTSL 2 BASIC20.21■□□□□ 0.83
GCNT4Q9P109 RUBCN-206ENST00000449205 1603 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
GCNT4Q9P109 KCTD12-201ENST00000377474 6225 ntAPPRIS P1 BASIC20.21■□□□□ 0.83
GCNT4Q9P109 C6orf118-201ENST00000230301 1812 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
GCNT4Q9P109 HSCB-201ENST00000216027 1114 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
GCNT4Q9P109 TSPY14P-201ENST00000303979 915 ntBASIC20.21■□□□□ 0.83
GCNT4Q9P109 PHOSPHO2-201ENST00000359744 1125 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
GCNT4Q9P109 TMEM240-201ENST00000378733 718 ntAPPRIS P1 TSL 2 BASIC20.21■□□□□ 0.83
GCNT4Q9P109 PMEPA1-204ENST00000395814 800 ntTSL 3 BASIC20.21■□□□□ 0.83
GCNT4Q9P109 CYB561D2-204ENST00000424512 1212 ntAPPRIS P1 TSL 5 BASIC20.21■□□□□ 0.83
GCNT4Q9P109 AL365259.1-203ENST00000451660 707 ntTSL 3 BASIC20.21■□□□□ 0.83
GCNT4Q9P109 ABHD11-207ENST00000458339 890 ntTSL 3 BASIC20.21■□□□□ 0.83
GCNT4Q9P109 CA15P1-201ENST00000481698 905 ntBASIC20.21■□□□□ 0.83
GCNT4Q9P109 IKBKB-210ENST00000518983 447 ntTSL 2 BASIC20.21■□□□□ 0.83
GCNT4Q9P109 C2orf69P3-201ENST00000565542 1120 ntBASIC20.21■□□□□ 0.83
GCNT4Q9P109 MYC-208ENST00000641036 567 ntBASIC20.21■□□□□ 0.83
GCNT4Q9P109 AC004890.2-202ENST00000463462 1494 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
GCNT4Q9P109 NFATC1-201ENST00000253506 4642 ntAPPRIS P3 TSL 1 (best) BASIC20.21■□□□□ 0.83
GCNT4Q9P109 ILK-203ENST00000420936 1692 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
GCNT4Q9P109 ISYNA1-206ENST00000578963 1691 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
GCNT4Q9P109 SLMAP-201ENST00000295951 5433 ntAPPRIS P1 TSL 5 BASIC20.21■□□□□ 0.83
GCNT4Q9P109 AC116565.2-201ENST00000637674 1854 ntTSL 2 BASIC20.21■□□□□ 0.83
GCNT4Q9P109 KLF13-201ENST00000307145 6825 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
GCNT4Q9P109 SLC47A2-201ENST00000325411 2258 ntAPPRIS P3 TSL 1 (best) BASIC20.21■□□□□ 0.83
GCNT4Q9P109 MCOLN2-201ENST00000284027 1729 ntAPPRIS P1 TSL 5 BASIC20.21■□□□□ 0.83
GCNT4Q9P109 CCK-202ENST00000396169 1527 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
GCNT4Q9P109 CCDC17-209ENST00000528266 2181 ntAPPRIS P3 TSL 2 BASIC20.21■□□□□ 0.83
GCNT4Q9P109 MUTYH-202ENST00000355498 1776 ntAPPRIS ALT2 TSL 1 (best) BASIC20.21■□□□□ 0.83
GCNT4Q9P109 AVL9-209ENST00000640103 1367 ntTSL 5 BASIC20.21■□□□□ 0.83
GCNT4Q9P109 HCLS1-201ENST00000314583 2000 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.83
Retrieved 100 of 98,524 protein–RNA pairs in 44.5 ms