Protein–RNA interactions for Protein: Q9NXR1

NDE1, Nuclear distribution protein nudE homolog 1, humanhuman

Predictions only

Length 346 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NDE1Q9NXR1 CDCP1-201ENST00000296129 6006 ntAPPRIS P3 TSL 1 (best) BASIC18■□□□□ 0.47
NDE1Q9NXR1 PTPRA-205ENST00000399903 3337 ntTSL 5 BASIC18■□□□□ 0.47
NDE1Q9NXR1 SNX24-211ENST00000513881 1563 ntTSL 1 (best) BASIC18■□□□□ 0.47
NDE1Q9NXR1 ZBTB7C-201ENST00000535628 4818 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
NDE1Q9NXR1 SOD2-206ENST00000452684 2045 ntTSL 1 (best) BASIC17.99■□□□□ 0.47
NDE1Q9NXR1 RBM42-204ENST00000589559 1328 ntTSL 5 BASIC17.99■□□□□ 0.47
NDE1Q9NXR1 FERMT2-203ENST00000395631 3369 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
NDE1Q9NXR1 CYP2U1-202ENST00000508453 3125 ntTSL 1 (best) BASIC17.99■□□□□ 0.47
NDE1Q9NXR1 ARMC10-209ENST00000454559 2347 ntTSL 1 (best) BASIC17.99■□□□□ 0.47
NDE1Q9NXR1 P4HB-203ENST00000439918 1502 ntTSL 5 BASIC17.99■□□□□ 0.47
NDE1Q9NXR1 POMT1-208ENST00000423007 3320 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
NDE1Q9NXR1 LRCH3-201ENST00000334859 2258 ntTSL 1 (best) BASIC17.99■□□□□ 0.47
NDE1Q9NXR1 PML-220ENST00000569477 2251 ntAPPRIS ALT2 TSL 1 (best) BASIC17.99■□□□□ 0.47
NDE1Q9NXR1 GAR1-201ENST00000226796 1224 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
NDE1Q9NXR1 FAM72A-203ENST00000367129 676 ntTSL 3 BASIC17.99■□□□□ 0.47
NDE1Q9NXR1 KHDC3L-201ENST00000370367 1018 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
NDE1Q9NXR1 CCDC160-201ENST00000370809 1299 ntAPPRIS P1 TSL 5 BASIC17.99■□□□□ 0.47
NDE1Q9NXR1 FAM72A-205ENST00000468509 629 ntTSL 5 BASIC17.99■□□□□ 0.47
NDE1Q9NXR1 RPS2P52-201ENST00000469610 820 ntBASIC17.99■□□□□ 0.47
NDE1Q9NXR1 C5orf38-206ENST00000505778 509 ntAPPRIS ALT2 TSL 1 (best) BASIC17.99■□□□□ 0.47
NDE1Q9NXR1 RRAS2-203ENST00000526063 970 ntTSL 1 (best) BASIC17.99■□□□□ 0.47
NDE1Q9NXR1 RRAS2-208ENST00000532814 982 ntTSL 1 (best) BASIC17.99■□□□□ 0.47
NDE1Q9NXR1 AC034102.6-201ENST00000550947 559 ntTSL 4 BASIC17.99■□□□□ 0.47
NDE1Q9NXR1 AP001005.4-202ENST00000575325 560 ntTSL 4 BASIC17.99■□□□□ 0.47
NDE1Q9NXR1 AC011825.4-201ENST00000582233 473 ntTSL 2 BASIC17.99■□□□□ 0.47
NDE1Q9NXR1 HNF1B-202ENST00000614313 1819 ntTSL 5 BASIC17.99■□□□□ 0.47
NDE1Q9NXR1 HNF1B-203ENST00000617272 1820 ntTSL 1 (best) BASIC17.99■□□□□ 0.47
NDE1Q9NXR1 MYZAP-201ENST00000267853 2361 ntAPPRIS P3 TSL 1 (best) BASIC17.99■□□□□ 0.47
NDE1Q9NXR1 LDLRAP1-201ENST00000374338 2940 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
NDE1Q9NXR1 PRRT1-201ENST00000211413 1909 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
NDE1Q9NXR1 ORAI3-204ENST00000566237 1393 ntTSL 5 BASIC17.99■□□□□ 0.47
NDE1Q9NXR1 SLC25A51-202ENST00000377716 1691 ntAPPRIS P1 TSL 3 BASIC17.99■□□□□ 0.47
NDE1Q9NXR1 AC026412.3-201ENST00000605200 1661 ntTSL 5 BASIC17.99■□□□□ 0.47
NDE1Q9NXR1 DPP6-202ENST00000377770 3710 ntAPPRIS P4 TSL 1 (best) BASIC17.99■□□□□ 0.47
NDE1Q9NXR1 ASZ1-201ENST00000284629 1865 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
NDE1Q9NXR1 RASSF8-AS1-202ENST00000500276 2610 ntTSL 2 BASIC17.99■□□□□ 0.47
NDE1Q9NXR1 GLYCTK-202ENST00000436784 1982 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
NDE1Q9NXR1 HEXIM2-201ENST00000307275 1528 ntAPPRIS P1 TSL 2 BASIC17.98■□□□□ 0.47
NDE1Q9NXR1 ASB13-201ENST00000357700 2699 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
NDE1Q9NXR1 C7orf49-202ENST00000424142 1738 ntTSL 2 BASIC17.98■□□□□ 0.47
NDE1Q9NXR1 AC087500.1-202ENST00000571689 1715 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
NDE1Q9NXR1 SLC30A2-202ENST00000374278 3097 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
NDE1Q9NXR1 CHRD-202ENST00000348986 3155 ntAPPRIS ALT2 TSL 5 BASIC17.98■□□□□ 0.47
NDE1Q9NXR1 CMTM3-214ENST00000567572 1934 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
NDE1Q9NXR1 LBX2-202ENST00000377566 1186 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
NDE1Q9NXR1 MPRIP-203ENST00000395806 527 ntTSL 3 BASIC17.98■□□□□ 0.47
NDE1Q9NXR1 ZCCHC9-204ENST00000438268 1248 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
NDE1Q9NXR1 ZNF148-203ENST00000468369 1025 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
NDE1Q9NXR1 DHRS4-207ENST00000559632 1003 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
NDE1Q9NXR1 AC092143.4-201ENST00000570217 559 ntTSL 4 BASIC17.98■□□□□ 0.47
NDE1Q9NXR1 AHSA2-202ENST00000394457 6574 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
NDE1Q9NXR1 STX18-205ENST00000505286 1380 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
NDE1Q9NXR1 TRIM61-201ENST00000329314 1582 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
NDE1Q9NXR1 AKT1-211ENST00000554848 1595 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
NDE1Q9NXR1 MOCS2-202ENST00000396954 1785 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
NDE1Q9NXR1 LEF1-201ENST00000265165 3068 ntAPPRIS P3 TSL 1 (best) BASIC17.98■□□□□ 0.47
NDE1Q9NXR1 RNF103-201ENST00000237455 3477 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
NDE1Q9NXR1 NRBP2-202ENST00000442628 3587 ntAPPRIS P1 TSL 2 BASIC17.98■□□□□ 0.47
NDE1Q9NXR1 KIAA1147-202ENST00000536163 7296 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
NDE1Q9NXR1 LOXL3-205ENST00000409986 2005 ntTSL 2 BASIC17.98■□□□□ 0.47
NDE1Q9NXR1 GPS1-201ENST00000306823 1842 ntAPPRIS P3 TSL 1 (best) BASIC17.98■□□□□ 0.47
NDE1Q9NXR1 L1CAM-203ENST00000370055 4655 ntTSL 5 BASIC17.98■□□□□ 0.47
NDE1Q9NXR1 CCNO-201ENST00000282572 1433 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
NDE1Q9NXR1 AC112777.1-201ENST00000540175 1423 ntBASIC17.98■□□□□ 0.47
NDE1Q9NXR1 RNASEH2C-203ENST00000528220 1337 ntTSL 2 BASIC17.98■□□□□ 0.47
NDE1Q9NXR1 GALNT17-201ENST00000333538 3884 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
NDE1Q9NXR1 PDE4D-204ENST00000358923 2969 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
NDE1Q9NXR1 MAPKAP1-208ENST00000394063 2977 ntTSL 5 BASIC17.97■□□□□ 0.47
NDE1Q9NXR1 MEGF9-201ENST00000373930 6298 ntAPPRIS P1 TSL 2 BASIC17.97■□□□□ 0.47
NDE1Q9NXR1 SERPINH1-215ENST00000533603 2299 ntAPPRIS P1 TSL 2 BASIC17.97■□□□□ 0.47
NDE1Q9NXR1 HCK-202ENST00000375852 2082 ntAPPRIS ALT2 TSL 1 (best) BASIC17.97■□□□□ 0.47
NDE1Q9NXR1 LURAP1-201ENST00000371980 1854 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
NDE1Q9NXR1 PRR29-AS1-202ENST00000580942 2926 ntTSL 2 BASIC17.97■□□□□ 0.47
NDE1Q9NXR1 C18orf63-201ENST00000579455 5127 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
NDE1Q9NXR1 LRCH1-201ENST00000311191 4710 ntAPPRIS ALT2 TSL 1 (best) BASIC17.97■□□□□ 0.47
NDE1Q9NXR1 EPOR-201ENST00000222139 2411 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
NDE1Q9NXR1 AC004890.2-201ENST00000426347 2419 ntTSL 5 BASIC17.97■□□□□ 0.47
NDE1Q9NXR1 SMARCA4-215ENST00000590574 5282 ntAPPRIS ALT1 TSL 5 BASIC17.97■□□□□ 0.47
NDE1Q9NXR1 FAM214B-206ENST00000603301 3256 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
NDE1Q9NXR1 KLHL24-201ENST00000242810 2345 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
NDE1Q9NXR1 SERPINB6-204ENST00000380529 1370 ntAPPRIS P1 TSL 2 BASIC17.97■□□□□ 0.47
NDE1Q9NXR1 NOL4L-211ENST00000621426 6577 ntAPPRIS P2 TSL 5 BASIC17.97■□□□□ 0.47
NDE1Q9NXR1 USP18-201ENST00000215794 2129 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
NDE1Q9NXR1 C16orf95-201ENST00000253461 953 ntAPPRIS P3 TSL 1 (best) BASIC17.97■□□□□ 0.47
NDE1Q9NXR1 HIST2H2AC-201ENST00000331380 390 ntAPPRIS P1 BASIC17.97■□□□□ 0.47
NDE1Q9NXR1 BECN1-201ENST00000361523 2112 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
NDE1Q9NXR1 GADD45A-201ENST00000370985 803 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
NDE1Q9NXR1 DDR1-228ENST00000376575 732 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
NDE1Q9NXR1 BHLHA9-201ENST00000391429 902 ntAPPRIS P1 BASIC17.97■□□□□ 0.47
NDE1Q9NXR1 KANSL1-AS1-201ENST00000398275 517 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
NDE1Q9NXR1 AC016769.1-201ENST00000409132 1010 ntBASIC17.97■□□□□ 0.47
NDE1Q9NXR1 AC007322.1-201ENST00000426983 750 ntBASIC17.97■□□□□ 0.47
NDE1Q9NXR1 TMEM70-203ENST00000517439 617 ntTSL 2 BASIC17.97■□□□□ 0.47
NDE1Q9NXR1 ZNF263-205ENST00000574253 1139 ntTSL 2 BASIC17.97■□□□□ 0.47
NDE1Q9NXR1 VIM-AS1-202ENST00000605833 918 ntTSL 3 BASIC17.97■□□□□ 0.47
NDE1Q9NXR1 TRA2A-212ENST00000621813 1931 ntAPPRIS ALT2 TSL 2 BASIC17.97■□□□□ 0.47
NDE1Q9NXR1 LINC00957-202ENST00000441052 2590 ntTSL 2 BASIC17.97■□□□□ 0.47
NDE1Q9NXR1 CAMK2G-205ENST00000372765 1822 ntTSL 5 BASIC17.97■□□□□ 0.47
NDE1Q9NXR1 GLRB-201ENST00000264428 3126 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
NDE1Q9NXR1 MCEMP1-201ENST00000333598 1730 ntAPPRIS P2 TSL 1 (best) BASIC17.97■□□□□ 0.47
Retrieved 100 of 98,524 protein–RNA pairs in 42.3 ms