Protein–RNA interactions for Protein: Q9NTX5

ECHDC1, Ethylmalonyl-CoA decarboxylase, humanhuman

Predictions only

Length 307 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ECHDC1Q9NTX5 MAP3K13-213ENST00000454237 526 ntTSL 3 BASIC22.62■■□□□ 1.21
ECHDC1Q9NTX5 C7orf49-209ENST00000483029 596 ntTSL 2 BASIC22.62■■□□□ 1.21
ECHDC1Q9NTX5 XYLT2-203ENST00000507602 2107 ntTSL 2 BASIC22.62■■□□□ 1.21
ECHDC1Q9NTX5 PTP4A3-206ENST00000524028 963 ntTSL 5 BASIC22.62■■□□□ 1.21
ECHDC1Q9NTX5 CDKN3-209ENST00000556102 938 ntTSL 5 BASIC22.62■■□□□ 1.21
ECHDC1Q9NTX5 GCSHP2-201ENST00000560971 527 ntBASIC22.62■■□□□ 1.21
ECHDC1Q9NTX5 RNF139-201ENST00000303545 2637 ntAPPRIS P1 TSL 1 (best) BASIC22.62■■□□□ 1.21
ECHDC1Q9NTX5 TTLL10-203ENST00000379290 2283 ntAPPRIS P1 TSL 1 (best) BASIC22.62■■□□□ 1.21
ECHDC1Q9NTX5 KLHDC4-227ENST00000622456 1422 ntTSL 5 BASIC22.62■■□□□ 1.21
ECHDC1Q9NTX5 HLA-G-205ENST00000428701 1578 ntAPPRIS P2 BASIC22.62■■□□□ 1.21
ECHDC1Q9NTX5 AGO3-202ENST00000324350 1726 ntTSL 2 BASIC22.62■■□□□ 1.21
ECHDC1Q9NTX5 PCDHB14-202ENST00000624896 2367 ntTSL 2 BASIC22.62■■□□□ 1.21
ECHDC1Q9NTX5 ASIC3-202ENST00000349064 1895 ntAPPRIS P1 TSL 1 (best) BASIC22.62■■□□□ 1.21
ECHDC1Q9NTX5 MARCH8-201ENST00000319836 5272 ntAPPRIS P1 TSL 1 (best) BASIC22.62■■□□□ 1.21
ECHDC1Q9NTX5 AL163051.1-201ENST00000569214 1512 ntBASIC22.62■■□□□ 1.21
ECHDC1Q9NTX5 SPERT-202ENST00000378966 1842 ntAPPRIS ALT2 TSL 1 (best) BASIC22.61■■□□□ 1.21
ECHDC1Q9NTX5 MRGPRF-AS1-201ENST00000538407 1490 ntTSL 1 (best) BASIC22.61■■□□□ 1.21
ECHDC1Q9NTX5 CIRBP-202ENST00000413636 1606 ntTSL 2 BASIC22.61■■□□□ 1.21
ECHDC1Q9NTX5 SIL1-202ENST00000394817 1923 ntAPPRIS P1 TSL 1 (best) BASIC22.61■■□□□ 1.21
ECHDC1Q9NTX5 TNNC1-201ENST00000232975 714 ntAPPRIS P1 TSL 1 (best) BASIC22.61■■□□□ 1.21
ECHDC1Q9NTX5 EPHX4-201ENST00000370383 1437 ntAPPRIS P1 TSL 1 (best) BASIC22.61■■□□□ 1.21
ECHDC1Q9NTX5 SELENOF-202ENST00000370554 1220 ntTSL 1 (best) BASIC22.61■■□□□ 1.21
ECHDC1Q9NTX5 AC117947.1-201ENST00000427448 529 ntBASIC22.61■■□□□ 1.21
ECHDC1Q9NTX5 DRAP1-205ENST00000527119 581 ntTSL 5 BASIC22.61■■□□□ 1.21
ECHDC1Q9NTX5 MRPL46-202ENST00000558531 1002 ntTSL 2 BASIC22.61■■□□□ 1.21
ECHDC1Q9NTX5 SYT17-207ENST00000568115 1721 ntTSL 5 BASIC22.61■■□□□ 1.21
ECHDC1Q9NTX5 RBM42-202ENST00000586618 771 ntTSL 3 BASIC22.61■■□□□ 1.21
ECHDC1Q9NTX5 LDLRAD4-211ENST00000587757 2171 ntTSL 2 BASIC22.61■■□□□ 1.21
ECHDC1Q9NTX5 CENPS-CORT-205ENST00000602787 571 ntAPPRIS P1 TSL 3 BASIC22.61■■□□□ 1.21
ECHDC1Q9NTX5 AC010240.3-201ENST00000607688 395 ntBASIC22.61■■□□□ 1.21
ECHDC1Q9NTX5 AC006011.2-201ENST00000621313 1158 ntBASIC22.61■■□□□ 1.21
ECHDC1Q9NTX5 AC011558.1-201ENST00000623459 338 ntBASIC22.61■■□□□ 1.21
ECHDC1Q9NTX5 AL031432.5-201ENST00000641059 760 ntBASIC22.61■■□□□ 1.21
ECHDC1Q9NTX5 CD55-206ENST00000391921 2433 ntTSL 1 (best) BASIC22.61■■□□□ 1.21
ECHDC1Q9NTX5 CDX4-201ENST00000373514 1515 ntAPPRIS P1 TSL 1 (best) BASIC22.61■■□□□ 1.21
ECHDC1Q9NTX5 FKRP-202ENST00000391909 2801 ntAPPRIS P1 TSL 2 BASIC22.61■■□□□ 1.21
ECHDC1Q9NTX5 TRIM41-202ENST00000351937 2696 ntTSL 1 (best) BASIC22.61■■□□□ 1.21
ECHDC1Q9NTX5 SNX4-201ENST00000251775 2513 ntAPPRIS P1 TSL 1 (best) BASIC22.61■■□□□ 1.21
ECHDC1Q9NTX5 NKX1-2-201ENST00000451024 3364 ntAPPRIS P1 TSL 5 BASIC22.61■■□□□ 1.21
ECHDC1Q9NTX5 IGFBP4-201ENST00000269593 2200 ntAPPRIS P1 TSL 1 (best) BASIC22.61■■□□□ 1.21
ECHDC1Q9NTX5 ZBTB8A-201ENST00000316459 1943 ntTSL 1 (best) BASIC22.61■■□□□ 1.21
ECHDC1Q9NTX5 LIN28B-AS1-203ENST00000636682 1797 ntTSL 3 BASIC22.61■■□□□ 1.21
ECHDC1Q9NTX5 AC104581.1-202ENST00000635932 2618 ntBASIC22.61■■□□□ 1.21
ECHDC1Q9NTX5 AC008393.1-201ENST00000499601 1454 ntTSL 1 (best) BASIC22.6■■□□□ 1.21
ECHDC1Q9NTX5 FKBP3-202ENST00000396062 1346 ntAPPRIS P1 TSL 1 (best) BASIC22.6■■□□□ 1.21
ECHDC1Q9NTX5 GUCA1A-201ENST00000053469 1874 ntAPPRIS P1 TSL 1 (best) BASIC22.6■■□□□ 1.21
ECHDC1Q9NTX5 AC009113.1-201ENST00000570267 2443 ntBASIC22.6■■□□□ 1.21
ECHDC1Q9NTX5 ACBD5-201ENST00000375888 1747 ntAPPRIS ALT2 TSL 5 BASIC22.6■■□□□ 1.21
ECHDC1Q9NTX5 TIMM13-201ENST00000215570 1973 ntAPPRIS P1 TSL 1 (best) BASIC22.6■■□□□ 1.21
ECHDC1Q9NTX5 NCK1-207ENST00000481752 1971 ntAPPRIS P1 TSL 5 BASIC22.6■■□□□ 1.21
ECHDC1Q9NTX5 SCYL2-201ENST00000360820 5779 ntAPPRIS P1 TSL 1 (best) BASIC22.6■■□□□ 1.21
ECHDC1Q9NTX5 C6orf118-201ENST00000230301 1812 ntAPPRIS P1 TSL 1 (best) BASIC22.6■■□□□ 1.21
ECHDC1Q9NTX5 ANKRD20A18P-201ENST00000359341 492 ntBASIC22.6■■□□□ 1.21
ECHDC1Q9NTX5 ICAM4-202ENST00000380770 1211 ntAPPRIS P3 TSL 1 (best) BASIC22.6■■□□□ 1.21
ECHDC1Q9NTX5 REPIN1-210ENST00000482680 1029 ntTSL 2 BASIC22.6■■□□□ 1.21
ECHDC1Q9NTX5 YBX1P2-201ENST00000489612 999 ntBASIC22.6■■□□□ 1.21
ECHDC1Q9NTX5 SDR39U1-202ENST00000538105 1041 ntTSL 2 BASIC22.6■■□□□ 1.21
ECHDC1Q9NTX5 AL441883.1-201ENST00000566170 1045 ntBASIC22.6■■□□□ 1.21
ECHDC1Q9NTX5 RN7SL850P-201ENST00000579959 291 ntBASIC22.6■■□□□ 1.21
ECHDC1Q9NTX5 MIR3180-4-201ENST00000582223 153 ntBASIC22.6■■□□□ 1.21
ECHDC1Q9NTX5 AC140113.3-201ENST00000605663 199 ntBASIC22.6■■□□□ 1.21
ECHDC1Q9NTX5 ANKRD36-207ENST00000639293 1168 ntAPPRIS ALT2 TSL 5 BASIC22.6■■□□□ 1.21
ECHDC1Q9NTX5 ISOC2-201ENST00000085068 1122 ntTSL 2 BASIC22.6■■□□□ 1.21
ECHDC1Q9NTX5 ZCCHC17-205ENST00000615916 1652 ntTSL 1 (best) BASIC22.6■■□□□ 1.21
ECHDC1Q9NTX5 TMEM176A-210ENST00000484928 1530 ntAPPRIS P2 TSL 5 BASIC22.6■■□□□ 1.21
ECHDC1Q9NTX5 GATM-201ENST00000396659 2597 ntAPPRIS P1 TSL 1 (best) BASIC22.6■■□□□ 1.21
ECHDC1Q9NTX5 MUTYH-202ENST00000355498 1776 ntAPPRIS ALT2 TSL 1 (best) BASIC22.6■■□□□ 1.21
ECHDC1Q9NTX5 SEMA3B-202ENST00000418576 1765 ntTSL 2 BASIC22.6■■□□□ 1.21
ECHDC1Q9NTX5 EGLN2-201ENST00000303961 2102 ntAPPRIS P1 TSL 1 (best) BASIC22.6■■□□□ 1.21
ECHDC1Q9NTX5 FAM206A-201ENST00000322940 2134 ntAPPRIS P1 TSL 1 (best) BASIC22.6■■□□□ 1.21
ECHDC1Q9NTX5 SNAP47-201ENST00000315781 2367 ntAPPRIS P3 TSL 1 (best) BASIC22.6■■□□□ 1.21
ECHDC1Q9NTX5 NF2-203ENST00000353887 1845 ntTSL 1 (best) BASIC22.59■■□□□ 1.21
ECHDC1Q9NTX5 MAGED2-213ENST00000627068 1811 ntAPPRIS ALT2 TSL 5 BASIC22.59■■□□□ 1.21
ECHDC1Q9NTX5 SALRNA1-201ENST00000555871 2086 ntTSL 4 BASIC22.59■■□□□ 1.21
ECHDC1Q9NTX5 CTSH-201ENST00000220166 2190 ntAPPRIS P1 TSL 1 (best) BASIC22.59■■□□□ 1.21
ECHDC1Q9NTX5 CPAMD8-202ENST00000388925 5355 ntTSL 5 BASIC22.59■■□□□ 1.21
ECHDC1Q9NTX5 CDH24-205ENST00000554034 2759 ntAPPRIS P1 TSL 1 (best) BASIC22.59■■□□□ 1.21
ECHDC1Q9NTX5 RNF146-203ENST00000368314 2369 ntAPPRIS ALT1 TSL 2 BASIC22.59■■□□□ 1.21
ECHDC1Q9NTX5 CDKN2AIPNL-202ENST00000458198 1223 ntAPPRIS P1 TSL 1 (best) BASIC22.59■■□□□ 1.21
ECHDC1Q9NTX5 SLC52A2-205ENST00000526752 710 ntTSL 3 BASIC22.59■■□□□ 1.21
ECHDC1Q9NTX5 AC090164.3-201ENST00000610780 2143 ntBASIC22.59■■□□□ 1.21
ECHDC1Q9NTX5 SYTL1-208ENST00000543823 2229 ntAPPRIS P1 TSL 1 (best) BASIC22.59■■□□□ 1.21
ECHDC1Q9NTX5 SPTBN4-201ENST00000338932 8686 ntAPPRIS ALT1 TSL 5 BASIC22.59■■□□□ 1.21
ECHDC1Q9NTX5 RNF114-201ENST00000244061 2503 ntAPPRIS P1 TSL 1 (best) BASIC22.59■■□□□ 1.21
ECHDC1Q9NTX5 KLHL40-201ENST00000287777 2517 ntAPPRIS P1 TSL 1 (best) BASIC22.59■■□□□ 1.21
ECHDC1Q9NTX5 STYXL1-208ENST00000451157 1570 ntTSL 1 (best) BASIC22.59■■□□□ 1.21
ECHDC1Q9NTX5 SAMD14-203ENST00000503131 1938 ntTSL 1 (best) BASIC22.59■■□□□ 1.21
ECHDC1Q9NTX5 FAM49B-214ENST00000519540 2021 ntAPPRIS P1 TSL 1 (best) BASIC22.58■■□□□ 1.21
ECHDC1Q9NTX5 SLC12A4-202ENST00000422611 4670 ntTSL 2 BASIC22.58■■□□□ 1.21
ECHDC1Q9NTX5 ALKBH4-201ENST00000292566 2105 ntAPPRIS P1 TSL 1 (best) BASIC22.58■■□□□ 1.21
ECHDC1Q9NTX5 NBL1-212ENST00000621723 2133 ntAPPRIS P3 TSL 2 BASIC22.58■■□□□ 1.21
ECHDC1Q9NTX5 LRRC14-201ENST00000292524 5328 ntAPPRIS P1 TSL 1 (best) BASIC22.58■■□□□ 1.21
ECHDC1Q9NTX5 AP5S1-202ENST00000379567 1791 ntAPPRIS P1 TSL 2 BASIC22.58■■□□□ 1.21
ECHDC1Q9NTX5 SEMA7A-203ENST00000543145 2304 ntTSL 2 BASIC22.58■■□□□ 1.21
ECHDC1Q9NTX5 L3HYPDH-201ENST00000247194 1527 ntAPPRIS P1 TSL 1 (best) BASIC22.58■■□□□ 1.21
ECHDC1Q9NTX5 SH3BP1-201ENST00000357436 2852 ntAPPRIS P1 TSL 1 (best) BASIC22.58■■□□□ 1.21
ECHDC1Q9NTX5 SLC35G2-202ENST00000446465 2060 ntAPPRIS P1 TSL 1 (best) BASIC22.58■■□□□ 1.21
ECHDC1Q9NTX5 PEPD-203ENST00000436370 1638 ntTSL 2 BASIC22.58■■□□□ 1.21
ECHDC1Q9NTX5 STRADB-202ENST00000392249 2190 ntTSL 1 (best) BASIC22.58■■□□□ 1.21
ECHDC1Q9NTX5 HYOU1-212ENST00000532519 2162 ntTSL 5 BASIC22.58■■□□□ 1.21
Retrieved 100 of 98,524 protein–RNA pairs in 19.5 ms