Protein–RNA interactions for Protein: Q9NRA0

SPHK2, Sphingosine kinase 2, humanhuman

Predictions only

Length 654 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SPHK2Q9NRA0 ROMO1-205ENST00000397416 288 ntAPPRIS P1 TSL 3 BASIC18.94■□□□□ 0.62
SPHK2Q9NRA0 AC113382.1-201ENST00000500267 1253 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
SPHK2Q9NRA0 SKP2-204ENST00000508514 821 ntTSL 3 BASIC18.94■□□□□ 0.62
SPHK2Q9NRA0 TPSP2-201ENST00000561760 610 ntBASIC18.94■□□□□ 0.62
SPHK2Q9NRA0 ZNF549-203ENST00000594943 556 ntTSL 4 BASIC18.94■□□□□ 0.62
SPHK2Q9NRA0 RABAC1-208ENST00000601078 728 ntTSL 3 BASIC18.94■□□□□ 0.62
SPHK2Q9NRA0 ASAH1-251ENST00000637561 929 ntTSL 2 BASIC18.94■□□□□ 0.62
SPHK2Q9NRA0 MED15P9-202ENST00000427638 1841 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
SPHK2Q9NRA0 RGS11-204ENST00000397770 2390 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
SPHK2Q9NRA0 TAPT1-201ENST00000405303 4591 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
SPHK2Q9NRA0 DISP3-202ENST00000304391 1495 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
SPHK2Q9NRA0 AC008393.1-201ENST00000499601 1454 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
SPHK2Q9NRA0 ENDOV-225ENST00000522751 1475 ntTSL 5 BASIC18.94■□□□□ 0.62
SPHK2Q9NRA0 RETREG2-203ENST00000430297 4618 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
SPHK2Q9NRA0 SOBP-201ENST00000317357 5245 ntAPPRIS P1 TSL 5 BASIC18.94■□□□□ 0.62
SPHK2Q9NRA0 STX11-201ENST00000367568 1926 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
SPHK2Q9NRA0 ZNF346-201ENST00000358149 2314 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
SPHK2Q9NRA0 WNT10A-201ENST00000258411 2547 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
SPHK2Q9NRA0 CDCA4-201ENST00000336219 2513 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
SPHK2Q9NRA0 GOSR2-226ENST00000639287 2367 ntTSL 5 BASIC18.93■□□□□ 0.62
SPHK2Q9NRA0 DISC1-202ENST00000317586 2636 ntAPPRIS ALT2 TSL 1 (best) BASIC18.93■□□□□ 0.62
SPHK2Q9NRA0 CTNND2-201ENST00000304623 5481 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
SPHK2Q9NRA0 TRIM13-206ENST00000457662 1489 ntAPPRIS P3 TSL 1 (best) BASIC18.93■□□□□ 0.62
SPHK2Q9NRA0 PIP5K1C-201ENST00000335312 5080 ntAPPRIS P3 TSL 1 (best) BASIC18.93■□□□□ 0.62
SPHK2Q9NRA0 MOS-201ENST00000311923 1041 ntAPPRIS P1 BASIC18.93■□□□□ 0.62
SPHK2Q9NRA0 TRAPPC3-202ENST00000373162 1056 ntTSL 2 BASIC18.93■□□□□ 0.62
SPHK2Q9NRA0 CDC26-201ENST00000374206 872 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
SPHK2Q9NRA0 DUSP15-203ENST00000375966 1077 ntTSL 3 BASIC18.93■□□□□ 0.62
SPHK2Q9NRA0 ENO1-AS1-201ENST00000442636 456 ntTSL 2 BASIC18.93■□□□□ 0.62
SPHK2Q9NRA0 AC073111.4-202ENST00000486297 585 ntTSL 4 BASIC18.93■□□□□ 0.62
SPHK2Q9NRA0 LINC02237-202ENST00000521904 477 ntTSL 3 BASIC18.93■□□□□ 0.62
SPHK2Q9NRA0 SDHD-206ENST00000528182 754 ntTSL 3 BASIC18.93■□□□□ 0.62
SPHK2Q9NRA0 AC090616.6-201ENST00000582640 721 ntBASIC18.93■□□□□ 0.62
SPHK2Q9NRA0 TK1-205ENST00000590862 642 ntTSL 3 BASIC18.93■□□□□ 0.62
SPHK2Q9NRA0 GNAS-AS1-203ENST00000598163 548 ntTSL 4 BASIC18.93■□□□□ 0.62
SPHK2Q9NRA0 AC011247.3-202ENST00000605062 570 ntTSL 4 BASIC18.93■□□□□ 0.62
SPHK2Q9NRA0 AL691432.3-201ENST00000621860 400 ntBASIC18.93■□□□□ 0.62
SPHK2Q9NRA0 TP53I11-223ENST00000627720 195 ntTSL 5 BASIC18.93■□□□□ 0.62
SPHK2Q9NRA0 METRNL-203ENST00000571814 1900 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
SPHK2Q9NRA0 AD000671.2-201ENST00000589807 1925 ntAPPRIS P1 TSL 2 BASIC18.93■□□□□ 0.62
SPHK2Q9NRA0 BRSK2-201ENST00000308219 4089 ntAPPRIS P3 TSL 1 (best) BASIC18.93■□□□□ 0.62
SPHK2Q9NRA0 MAP7D1-201ENST00000316156 3456 ntAPPRIS ALT2 TSL 1 (best) BASIC18.93■□□□□ 0.62
SPHK2Q9NRA0 NSUN2-206ENST00000506139 2619 ntAPPRIS ALT2 TSL 2 BASIC18.93■□□□□ 0.62
SPHK2Q9NRA0 HOXC13-201ENST00000243056 2423 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
SPHK2Q9NRA0 NFIB-207ENST00000397579 3129 ntTSL 5 BASIC18.93■□□□□ 0.62
SPHK2Q9NRA0 SORBS3-221ENST00000523965 2028 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
SPHK2Q9NRA0 ACBD4-207ENST00000586346 1579 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
SPHK2Q9NRA0 FBLN1-201ENST00000262722 2251 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
SPHK2Q9NRA0 CHRNB4-202ENST00000412074 1355 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
SPHK2Q9NRA0 FAR2P2-204ENST00000424873 2070 ntTSL 2 BASIC18.93■□□□□ 0.62
SPHK2Q9NRA0 STXBP2-201ENST00000221283 1876 ntAPPRIS P3 TSL 1 (best) BASIC18.92■□□□□ 0.62
SPHK2Q9NRA0 MUS81-201ENST00000308110 2392 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
SPHK2Q9NRA0 C6orf136-203ENST00000376473 1402 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
SPHK2Q9NRA0 C16orf59-210ENST00000569496 1911 ntAPPRIS ALT2 TSL 5 BASIC18.92■□□□□ 0.62
SPHK2Q9NRA0 PROB1-201ENST00000434752 5122 ntAPPRIS P1 BASIC18.92■□□□□ 0.62
SPHK2Q9NRA0 KRT89P-201ENST00000620027 1478 ntBASIC18.92■□□□□ 0.62
SPHK2Q9NRA0 ACD-215ENST00000620761 1483 ntAPPRIS ALT2 TSL 1 (best) BASIC18.92■□□□□ 0.62
SPHK2Q9NRA0 P2RX5-203ENST00000547178 1998 ntAPPRIS ALT2 TSL 1 (best) BASIC18.92■□□□□ 0.62
SPHK2Q9NRA0 HS3ST4-201ENST00000331351 3203 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
SPHK2Q9NRA0 SERPINH1-215ENST00000533603 2299 ntAPPRIS P1 TSL 2 BASIC18.92■□□□□ 0.62
SPHK2Q9NRA0 PFN1-201ENST00000225655 1291 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
SPHK2Q9NRA0 GNGT2-201ENST00000300406 889 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
SPHK2Q9NRA0 SFTPD-201ENST00000372292 1281 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
SPHK2Q9NRA0 IFT27-205ENST00000433985 1095 ntAPPRIS ALT1 TSL 1 (best) BASIC18.92■□□□□ 0.62
SPHK2Q9NRA0 TPM4P1-201ENST00000436100 807 ntBASIC18.92■□□□□ 0.62
SPHK2Q9NRA0 CIB2-208ENST00000560618 804 ntTSL 2 BASIC18.92■□□□□ 0.62
SPHK2Q9NRA0 AP000547.2-201ENST00000609641 661 ntTSL 5 BASIC18.92■□□□□ 0.62
SPHK2Q9NRA0 USP21-203ENST00000368002 2342 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
SPHK2Q9NRA0 TMEM222-201ENST00000374076 1599 ntAPPRIS P2 TSL 1 (best) BASIC18.92■□□□□ 0.62
SPHK2Q9NRA0 LINC01700-201ENST00000433952 1598 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
SPHK2Q9NRA0 MFSD1-219ENST00000622669 2361 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
SPHK2Q9NRA0 GBX2-203ENST00000551105 1307 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
SPHK2Q9NRA0 GFI1-203ENST00000427103 2693 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
SPHK2Q9NRA0 AC026362.1-201ENST00000540866 5618 ntTSL 2 BASIC18.92■□□□□ 0.62
SPHK2Q9NRA0 NSMF-206ENST00000371475 2987 ntAPPRIS ALT1 TSL 1 (best) BASIC18.92■□□□□ 0.62
SPHK2Q9NRA0 UBE2E1-202ENST00000346855 1398 ntTSL 3 BASIC18.92■□□□□ 0.62
SPHK2Q9NRA0 RBFOX1-204ENST00000422070 1684 ntTSL 2 BASIC18.92■□□□□ 0.62
SPHK2Q9NRA0 WNT7B-202ENST00000409496 2285 ntAPPRIS ALT1 TSL 2 BASIC18.91■□□□□ 0.62
SPHK2Q9NRA0 RPL3-201ENST00000216146 1442 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
SPHK2Q9NRA0 ASMTL-201ENST00000381317 2027 ntAPPRIS P3 TSL 1 (best) BASIC18.91■□□□□ 0.62
SPHK2Q9NRA0 SRP68-201ENST00000307877 2649 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
SPHK2Q9NRA0 SMARCD2-203ENST00000448276 2716 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
SPHK2Q9NRA0 GUCA1A-201ENST00000053469 1874 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
SPHK2Q9NRA0 CARHSP1-201ENST00000311052 746 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
SPHK2Q9NRA0 DBNDD2-202ENST00000360981 1078 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
SPHK2Q9NRA0 CORT-201ENST00000377049 1130 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
SPHK2Q9NRA0 HDAC11-204ENST00000404040 967 ntTSL 3 BASIC18.91■□□□□ 0.62
SPHK2Q9NRA0 RNF144A-AS1-205ENST00000439208 757 ntTSL 3 BASIC18.91■□□□□ 0.62
SPHK2Q9NRA0 NUS1P1-201ENST00000446295 882 ntBASIC18.91■□□□□ 0.62
SPHK2Q9NRA0 LINC00265-3P-201ENST00000447588 903 ntBASIC18.91■□□□□ 0.62
SPHK2Q9NRA0 PCAT7-201ENST00000452148 1164 ntTSL 2 BASIC18.91■□□□□ 0.62
SPHK2Q9NRA0 LBX1-AS1-204ENST00000456391 421 ntTSL 5 BASIC18.91■□□□□ 0.62
SPHK2Q9NRA0 PRAP1-202ENST00000463201 587 ntAPPRIS ALT2 TSL 1 (best) BASIC18.91■□□□□ 0.62
SPHK2Q9NRA0 PPOX-214ENST00000535223 664 ntTSL 3 BASIC18.91■□□□□ 0.62
SPHK2Q9NRA0 IGHV3-41-201ENST00000613121 348 ntBASIC18.91■□□□□ 0.62
SPHK2Q9NRA0 SMN2-213ENST00000614240 804 ntAPPRIS ALT2 TSL 5 BASIC18.91■□□□□ 0.62
SPHK2Q9NRA0 TPCN2-208ENST00000637342 2856 ntTSL 5 BASIC18.91■□□□□ 0.62
SPHK2Q9NRA0 COL4A3BP-201ENST00000261415 2262 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
SPHK2Q9NRA0 MEN1-209ENST00000394376 3034 ntAPPRIS P3 TSL 5 BASIC18.91■□□□□ 0.62
SPHK2Q9NRA0 EVL-202ENST00000402714 2353 ntAPPRIS ALT1 TSL 1 (best) BASIC18.91■□□□□ 0.62
Retrieved 100 of 98,524 protein–RNA pairs in 82.6 ms