Protein–RNA interactions for Protein: Q9NP62

GCM1, Chorion-specific transcription factor GCMa, humanhuman

Predictions only

Length 436 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GCM1Q9NP62 ATIC-205ENST00000435675 2275 ntTSL 2 BASIC15.88■□□□□ 0.13
GCM1Q9NP62 DMRT2-201ENST00000259622 2459 ntTSL 2 BASIC15.88■□□□□ 0.13
GCM1Q9NP62 KRT81-202ENST00000615839 1505 ntAPPRIS ALT2 TSL 5 BASIC15.88■□□□□ 0.13
GCM1Q9NP62 C16orf59-210ENST00000569496 1911 ntAPPRIS ALT2 TSL 5 BASIC15.88■□□□□ 0.13
GCM1Q9NP62 TCTA-201ENST00000273590 2146 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
GCM1Q9NP62 PITX2-203ENST00000355080 2100 ntTSL 1 (best) BASIC15.88■□□□□ 0.13
GCM1Q9NP62 SMARCC2-203ENST00000394023 4271 ntAPPRIS ALT2 TSL 1 (best) BASIC15.88■□□□□ 0.13
GCM1Q9NP62 PSRC1-202ENST00000369904 1584 ntAPPRIS ALT2 TSL 1 (best) BASIC15.87■□□□□ 0.13
GCM1Q9NP62 FAM135A-205ENST00000418814 6415 ntTSL 5 BASIC15.87■□□□□ 0.13
GCM1Q9NP62 SLC35F5-201ENST00000245680 4412 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
GCM1Q9NP62 CD55-201ENST00000314754 2220 ntAPPRIS ALT2 TSL 1 (best) BASIC15.87■□□□□ 0.13
GCM1Q9NP62 IRF7-202ENST00000348655 1801 ntAPPRIS ALT2 TSL 1 (best) BASIC15.87■□□□□ 0.13
GCM1Q9NP62 LINC01356-201ENST00000401018 1819 ntTSL 2 BASIC15.87■□□□□ 0.13
GCM1Q9NP62 KRT8P45-201ENST00000414328 1447 ntBASIC15.87■□□□□ 0.13
GCM1Q9NP62 AC073508.3-201ENST00000619697 1419 ntBASIC15.87■□□□□ 0.13
GCM1Q9NP62 MTMR1-208ENST00000445323 4516 ntTSL 1 (best) BASIC15.87■□□□□ 0.13
GCM1Q9NP62 LPCAT3-201ENST00000261407 2268 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
GCM1Q9NP62 UTP18-201ENST00000225298 1894 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
GCM1Q9NP62 SLC25A51-202ENST00000377716 1691 ntAPPRIS P1 TSL 3 BASIC15.87■□□□□ 0.13
GCM1Q9NP62 AL109659.2-201ENST00000606809 1674 ntBASIC15.87■□□□□ 0.13
GCM1Q9NP62 TSPY8-202ENST00000383000 1125 ntAPPRIS ALT2 TSL 1 (best) BASIC15.87■□□□□ 0.13
GCM1Q9NP62 TSPY2-202ENST00000383042 1125 ntAPPRIS ALT2 TSL 1 (best) BASIC15.87■□□□□ 0.13
GCM1Q9NP62 RCN1P1-201ENST00000400413 996 ntBASIC15.87■□□□□ 0.13
GCM1Q9NP62 ICAM1-202ENST00000423829 1296 ntTSL 2 BASIC15.87■□□□□ 0.13
GCM1Q9NP62 TSPY3-201ENST00000424594 1125 ntAPPRIS ALT2 TSL 1 (best) BASIC15.87■□□□□ 0.13
GCM1Q9NP62 TSPY10-202ENST00000444056 1125 ntAPPRIS ALT2 TSL 1 (best) BASIC15.87■□□□□ 0.13
GCM1Q9NP62 RPL29-202ENST00000466397 742 ntAPPRIS P1 TSL 2 BASIC15.87■□□□□ 0.13
GCM1Q9NP62 DYNLL1-205ENST00000548342 662 ntAPPRIS P1 TSL 2 BASIC15.87■□□□□ 0.13
GCM1Q9NP62 TRAPPC6A-201ENST00000006275 805 ntTSL 1 (best) BASIC15.87■□□□□ 0.13
GCM1Q9NP62 AC009542.2-201ENST00000637483 1189 ntTSL 5 BASIC15.87■□□□□ 0.13
GCM1Q9NP62 PPRC1-201ENST00000278070 5330 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
GCM1Q9NP62 FARP1-242ENST00000627049 5103 ntTSL 5 BASIC15.87■□□□□ 0.13
GCM1Q9NP62 HCN1-201ENST00000303230 9885 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
GCM1Q9NP62 MTSS1-203ENST00000431961 1711 ntTSL 1 (best) BASIC15.87■□□□□ 0.13
GCM1Q9NP62 PHF2-202ENST00000375376 3045 ntTSL 5 BASIC15.87■□□□□ 0.13
GCM1Q9NP62 PHB2-203ENST00000535923 1515 ntAPPRIS P2 TSL 5 BASIC15.87■□□□□ 0.13
GCM1Q9NP62 PRSS36-202ENST00000418068 2446 ntTSL 2 BASIC15.87■□□□□ 0.13
GCM1Q9NP62 CYSTM1-201ENST00000261811 1336 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
GCM1Q9NP62 ST3GAL3-205ENST00000347631 1324 ntTSL 5 BASIC15.87■□□□□ 0.13
GCM1Q9NP62 OGFOD2-201ENST00000228922 1780 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
GCM1Q9NP62 TMEM104-202ENST00000417024 1781 ntTSL 2 BASIC15.87■□□□□ 0.13
GCM1Q9NP62 ACVR1B-205ENST00000541224 1791 ntTSL 2 BASIC15.87■□□□□ 0.13
GCM1Q9NP62 TRIM47-201ENST00000254816 2266 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
GCM1Q9NP62 FO681492.1-203ENST00000622861 1362 ntAPPRIS ALT2 TSL 5 BASIC15.87■□□□□ 0.13
GCM1Q9NP62 EIF4E3-201ENST00000295612 2764 ntTSL 1 (best) BASIC15.87■□□□□ 0.13
GCM1Q9NP62 RUNX2-201ENST00000359524 5390 ntTSL 1 (best) BASIC15.86■□□□□ 0.13
GCM1Q9NP62 PRR23B-201ENST00000329447 1896 ntAPPRIS P1 BASIC15.86■□□□□ 0.13
GCM1Q9NP62 ESPN-205ENST00000461727 1869 ntTSL 1 (best) BASIC15.86■□□□□ 0.13
GCM1Q9NP62 ZNF280D-205ENST00000559000 4726 ntAPPRIS ALT2 TSL 2 BASIC15.86■□□□□ 0.13
GCM1Q9NP62 DMWD-201ENST00000270223 3305 ntAPPRIS P2 TSL 1 (best) BASIC15.86■□□□□ 0.13
GCM1Q9NP62 KHDC1-202ENST00000370384 1430 ntAPPRIS ALT2 TSL 1 (best) BASIC15.86■□□□□ 0.13
GCM1Q9NP62 DIO1-201ENST00000322679 1658 ntTSL 1 (best) BASIC15.86■□□□□ 0.13
GCM1Q9NP62 DIO1-217ENST00000617230 1656 ntTSL 5 BASIC15.86■□□□□ 0.13
GCM1Q9NP62 SOGA3-203ENST00000525778 4077 ntAPPRIS P1 TSL 5 BASIC15.86■□□□□ 0.13
GCM1Q9NP62 CACNA1A-258ENST00000638029 7814 ntAPPRIS ALT2 TSL 5 BASIC15.86■□□□□ 0.13
GCM1Q9NP62 ADARB1-202ENST00000360697 6604 ntTSL 1 (best) BASIC15.86■□□□□ 0.13
GCM1Q9NP62 WNT6-201ENST00000233948 1703 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
GCM1Q9NP62 FADS2-209ENST00000521849 1703 ntTSL 1 (best) BASIC15.86■□□□□ 0.13
GCM1Q9NP62 DPF1-203ENST00000414789 1960 ntTSL 2 BASIC15.86■□□□□ 0.13
GCM1Q9NP62 DNAJC28-204ENST00000617313 2237 ntAPPRIS P1 TSL 5 BASIC15.86■□□□□ 0.13
GCM1Q9NP62 AC008073.3-201ENST00000610442 2281 ntAPPRIS P1 TSL 2 BASIC15.86■□□□□ 0.13
GCM1Q9NP62 TRIP4-201ENST00000261884 2045 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
GCM1Q9NP62 RASSF5-205ENST00000581503 5586 ntTSL 1 (best) BASIC15.86■□□□□ 0.13
GCM1Q9NP62 CD72-201ENST00000259633 1548 ntAPPRIS P2 TSL 1 (best) BASIC15.86■□□□□ 0.13
GCM1Q9NP62 TMEM106C-202ENST00000429772 1515 ntAPPRIS P1 TSL 2 BASIC15.86■□□□□ 0.13
GCM1Q9NP62 CFL1-201ENST00000308162 1234 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
GCM1Q9NP62 S100A16-203ENST00000368705 956 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
GCM1Q9NP62 TSPO2-202ENST00000373161 958 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
GCM1Q9NP62 MCF2L-207ENST00000397024 490 ntTSL 5 BASIC15.86■□□□□ 0.13
GCM1Q9NP62 AC008105.2-201ENST00000420431 579 ntTSL 4 BASIC15.86■□□□□ 0.13
GCM1Q9NP62 TSPO2-203ENST00000470917 699 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
GCM1Q9NP62 DIO1-206ENST00000525202 558 ntTSL 1 (best) BASIC15.86■□□□□ 0.13
GCM1Q9NP62 DEUP1-206ENST00000530273 410 ntTSL 3 BASIC15.86■□□□□ 0.13
GCM1Q9NP62 NDUFS3-213ENST00000534716 1263 ntTSL 2 BASIC15.86■□□□□ 0.13
GCM1Q9NP62 CALM3-208ENST00000596362 1203 ntAPPRIS P1 TSL 2 BASIC15.86■□□□□ 0.13
GCM1Q9NP62 AC022154.1-201ENST00000600303 766 ntTSL 3 BASIC15.86■□□□□ 0.13
GCM1Q9NP62 AC092865.7-201ENST00000641832 219 ntBASIC15.86■□□□□ 0.13
GCM1Q9NP62 OPRK1-205ENST00000612786 5196 ntTSL 1 (best) BASIC15.86■□□□□ 0.13
GCM1Q9NP62 ANKMY1-209ENST00000405523 1827 ntTSL 1 (best) BASIC15.86■□□□□ 0.13
GCM1Q9NP62 HDAC11-221ENST00000522202 1559 ntAPPRIS ALT2 TSL 2 BASIC15.86■□□□□ 0.13
GCM1Q9NP62 MYO1B-204ENST00000392318 5082 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
GCM1Q9NP62 CHRNA10-201ENST00000250699 1945 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
GCM1Q9NP62 AP2M1-201ENST00000292807 1931 ntAPPRIS P4 TSL 5 BASIC15.86■□□□□ 0.13
GCM1Q9NP62 SAMD11-211ENST00000616125 2230 ntAPPRIS ALT2 TSL 5 BASIC15.86■□□□□ 0.13
GCM1Q9NP62 RND1-201ENST00000309739 1681 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
GCM1Q9NP62 NHLH2-201ENST00000320238 2512 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
GCM1Q9NP62 TMEM259-209ENST00000592590 2509 ntTSL 5 BASIC15.86■□□□□ 0.13
GCM1Q9NP62 METTL21A-203ENST00000411432 4805 ntAPPRIS P1 TSL 2 BASIC15.85■□□□□ 0.13
GCM1Q9NP62 THOC3-212ENST00000628318 1442 ntTSL 5 BASIC15.85■□□□□ 0.13
GCM1Q9NP62 LINC00466-207ENST00000634725 1736 ntTSL 5 BASIC15.85■□□□□ 0.13
GCM1Q9NP62 AC008556.1-201ENST00000610908 2040 ntBASIC15.85■□□□□ 0.13
GCM1Q9NP62 PIANP-201ENST00000320591 2323 ntAPPRIS P3 TSL 1 (best) BASIC15.85■□□□□ 0.13
GCM1Q9NP62 PGM1-205ENST00000540265 2345 ntTSL 2 BASIC15.85■□□□□ 0.13
GCM1Q9NP62 LGALS8-AS1-201ENST00000487567 1457 ntBASIC15.85■□□□□ 0.13
GCM1Q9NP62 MFSD10-202ENST00000355443 1753 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
GCM1Q9NP62 WDR34-201ENST00000372715 1755 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
GCM1Q9NP62 UMOD-203ENST00000396138 2399 ntAPPRIS ALT2 TSL 5 BASIC15.85■□□□□ 0.13
GCM1Q9NP62 CCDC106-201ENST00000308964 1546 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
GCM1Q9NP62 AGAP5-203ENST00000581191 2779 ntAPPRIS ALT2 TSL 5 BASIC15.85■□□□□ 0.13
GCM1Q9NP62 BOLA3-202ENST00000327428 639 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
Retrieved 100 of 98,524 protein–RNA pairs in 78.3 ms