Protein–RNA interactions for Protein: Q9H347

UBQLN3, Ubiquilin-3, humanhuman

Predictions only

Length 655 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBQLN3Q9H347 TEKT5-201ENST00000283025 1612 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
UBQLN3Q9H347 TBC1D3P2-202ENST00000577902 1649 ntBASIC17.22■□□□□ 0.35
UBQLN3Q9H347 MRPL3-201ENST00000264995 1706 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
UBQLN3Q9H347 DCBLD2-201ENST00000326840 6122 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
UBQLN3Q9H347 HEXDC-203ENST00000577944 1820 ntTSL 5 BASIC17.22■□□□□ 0.35
UBQLN3Q9H347 ITGB5-201ENST00000296181 4372 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
UBQLN3Q9H347 ZNF668-208ENST00000538906 2865 ntAPPRIS P1 TSL 2 BASIC17.22■□□□□ 0.35
UBQLN3Q9H347 METTL5-201ENST00000260953 1010 ntAPPRIS P2 TSL 1 (best) BASIC17.22■□□□□ 0.35
UBQLN3Q9H347 COMMD1-201ENST00000311832 911 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
UBQLN3Q9H347 BOLA3-202ENST00000327428 639 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
UBQLN3Q9H347 TSPO2-202ENST00000373161 958 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
UBQLN3Q9H347 TSPY8-202ENST00000383000 1125 ntAPPRIS ALT2 TSL 1 (best) BASIC17.22■□□□□ 0.35
UBQLN3Q9H347 TSPY2-202ENST00000383042 1125 ntAPPRIS ALT2 TSL 1 (best) BASIC17.22■□□□□ 0.35
UBQLN3Q9H347 TSPY3-201ENST00000424594 1125 ntAPPRIS ALT2 TSL 1 (best) BASIC17.22■□□□□ 0.35
UBQLN3Q9H347 NDUFA13-201ENST00000428459 576 ntTSL 2 BASIC17.22■□□□□ 0.35
UBQLN3Q9H347 TSPY10-202ENST00000444056 1125 ntAPPRIS ALT2 TSL 1 (best) BASIC17.22■□□□□ 0.35
UBQLN3Q9H347 TSPO2-203ENST00000470917 699 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
UBQLN3Q9H347 AC126696.3-202ENST00000570159 553 ntTSL 5 BASIC17.22■□□□□ 0.35
UBQLN3Q9H347 SUSD3-205ENST00000617293 1076 ntAPPRIS ALT2 TSL 3 BASIC17.22■□□□□ 0.35
UBQLN3Q9H347 AC083906.6-201ENST00000641366 219 ntBASIC17.22■□□□□ 0.35
UBQLN3Q9H347 RPS6KA1-204ENST00000374168 3186 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
UBQLN3Q9H347 KRT13-202ENST00000336861 1673 ntAPPRIS ALT2 TSL 1 (best) BASIC17.22■□□□□ 0.35
UBQLN3Q9H347 LONRF1-208ENST00000533751 3043 ntTSL 5 BASIC17.22■□□□□ 0.35
UBQLN3Q9H347 DMD-208ENST00000378680 1858 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
UBQLN3Q9H347 PER3-203ENST00000377541 1524 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
UBQLN3Q9H347 TNFRSF19-202ENST00000382258 1625 ntAPPRIS P4 TSL 1 (best) BASIC17.21■□□□□ 0.35
UBQLN3Q9H347 CYP2F1-201ENST00000331105 1720 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
UBQLN3Q9H347 PCCB-216ENST00000483687 1727 ntTSL 3 BASIC17.21■□□□□ 0.35
UBQLN3Q9H347 ABCC5-204ENST00000392579 1848 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
UBQLN3Q9H347 ARSA-203ENST00000395619 1824 ntAPPRIS P1 TSL 5 BASIC17.21■□□□□ 0.35
UBQLN3Q9H347 EWSR1-207ENST00000406548 2207 ntAPPRIS ALT2 TSL 1 (best) BASIC17.21■□□□□ 0.35
UBQLN3Q9H347 CD55-206ENST00000391921 2433 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
UBQLN3Q9H347 EML3-217ENST00000531557 2509 ntTSL 5 BASIC17.21■□□□□ 0.35
UBQLN3Q9H347 RAP1GAP-204ENST00000374761 3318 ntTSL 5 BASIC17.21■□□□□ 0.35
UBQLN3Q9H347 LRP3-201ENST00000253193 3807 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
UBQLN3Q9H347 HYOU1-212ENST00000532519 2162 ntTSL 5 BASIC17.21■□□□□ 0.35
UBQLN3Q9H347 ZNF395-211ENST00000523202 2068 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
UBQLN3Q9H347 PHLDA1-202ENST00000602540 5741 ntAPPRIS ALT2 TSL 1 (best) BASIC17.21■□□□□ 0.35
UBQLN3Q9H347 PSTPIP1-203ENST00000558012 1896 ntAPPRIS P2 TSL 1 (best) BASIC17.21■□□□□ 0.35
UBQLN3Q9H347 FKBP8-206ENST00000596558 1756 ntAPPRIS ALT1 TSL 2 BASIC17.21■□□□□ 0.35
UBQLN3Q9H347 TSPAN4-204ENST00000397404 1462 ntAPPRIS P1 TSL 5 BASIC17.21■□□□□ 0.35
UBQLN3Q9H347 MAP3K6-207ENST00000493901 4309 ntAPPRIS P1 TSL 5 BASIC17.21■□□□□ 0.35
UBQLN3Q9H347 JAKMIP1-208ENST00000637373 1362 ntTSL 5 BASIC17.21■□□□□ 0.35
UBQLN3Q9H347 CCK-201ENST00000334681 830 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
UBQLN3Q9H347 MIR1224-201ENST00000408193 85 ntBASIC17.21■□□□□ 0.35
UBQLN3Q9H347 AC099329.3-201ENST00000431549 602 ntAPPRIS P1 TSL 4 BASIC17.21■□□□□ 0.35
UBQLN3Q9H347 ATP5G1P1-201ENST00000448724 379 ntBASIC17.21■□□□□ 0.35
UBQLN3Q9H347 PTP4A3-206ENST00000524028 963 ntTSL 5 BASIC17.21■□□□□ 0.35
UBQLN3Q9H347 CALM3-208ENST00000596362 1203 ntAPPRIS P1 TSL 2 BASIC17.21■□□□□ 0.35
UBQLN3Q9H347 AL158151.3-201ENST00000599172 696 ntTSL 5 BASIC17.21■□□□□ 0.35
UBQLN3Q9H347 ISOC2-201ENST00000085068 1122 ntTSL 2 BASIC17.21■□□□□ 0.35
UBQLN3Q9H347 MYH7B-201ENST00000262873 6293 ntAPPRIS P2 TSL 1 (best) BASIC17.21■□□□□ 0.35
UBQLN3Q9H347 SNN-201ENST00000329565 3312 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
UBQLN3Q9H347 SHANK3-203ENST00000445220 5175 ntAPPRIS ALT2 TSL 5 BASIC17.21■□□□□ 0.35
UBQLN3Q9H347 SEC14L2-215ENST00000617837 2632 ntTSL 2 BASIC17.21■□□□□ 0.35
UBQLN3Q9H347 IGFALS-202ENST00000415638 2136 ntTSL 2 BASIC17.21■□□□□ 0.35
UBQLN3Q9H347 OCSTAMP-201ENST00000279028 2043 ntAPPRIS P1 TSL 5 BASIC17.21■□□□□ 0.35
UBQLN3Q9H347 GPR42-201ENST00000454971 1804 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
UBQLN3Q9H347 LGI2-201ENST00000382114 6428 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
UBQLN3Q9H347 ANO7L1-203ENST00000602586 1720 ntBASIC17.21■□□□□ 0.35
UBQLN3Q9H347 SLC25A43-201ENST00000217909 2783 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
UBQLN3Q9H347 AP001922.1-201ENST00000499390 1504 ntTSL 1 (best) BASIC17.21■□□□□ 0.34
UBQLN3Q9H347 RIOX2-201ENST00000333396 5347 ntAPPRIS ALT1 TSL 1 (best) BASIC17.21■□□□□ 0.34
UBQLN3Q9H347 ACD-203ENST00000602320 1408 ntAPPRIS ALT2 TSL 5 BASIC17.21■□□□□ 0.34
UBQLN3Q9H347 H1FNT-201ENST00000335017 1300 ntAPPRIS P1 BASIC17.21■□□□□ 0.34
UBQLN3Q9H347 CCDC3-201ENST00000378825 2731 ntAPPRIS P3 TSL 1 (best) BASIC17.2■□□□□ 0.34
UBQLN3Q9H347 RNH1-201ENST00000354420 1894 ntAPPRIS P1 TSL 5 BASIC17.2■□□□□ 0.34
UBQLN3Q9H347 PPFIA1-202ENST00000389547 4133 ntAPPRIS ALT1 TSL 1 (best) BASIC17.2■□□□□ 0.34
UBQLN3Q9H347 ZNF385B-204ENST00000410066 3288 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
UBQLN3Q9H347 SLC25A51-202ENST00000377716 1691 ntAPPRIS P1 TSL 3 BASIC17.2■□□□□ 0.34
UBQLN3Q9H347 AATF-208ENST00000619387 2141 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
UBQLN3Q9H347 CADPS2-208ENST00000615869 6066 ntAPPRIS ALT1 TSL 5 BASIC17.2■□□□□ 0.34
UBQLN3Q9H347 EPB41L2-211ENST00000525271 2568 ntTSL 2 BASIC17.2■□□□□ 0.34
UBQLN3Q9H347 KANK4-204ENST00000371153 4665 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
UBQLN3Q9H347 DDX42-216ENST00000583590 4148 ntAPPRIS P1 TSL 5 BASIC17.2■□□□□ 0.34
UBQLN3Q9H347 FO681492.1-203ENST00000622861 1362 ntAPPRIS ALT2 TSL 5 BASIC17.2■□□□□ 0.34
UBQLN3Q9H347 PRSS23-201ENST00000280258 4015 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
UBQLN3Q9H347 SELENOF-202ENST00000370554 1220 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
UBQLN3Q9H347 MRPL53-202ENST00000409710 386 ntTSL 2 BASIC17.2■□□□□ 0.34
UBQLN3Q9H347 SPAG16-207ENST00000432529 1250 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
UBQLN3Q9H347 AL451069.1-201ENST00000455414 634 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
UBQLN3Q9H347 AC002467.1-201ENST00000457510 657 ntTSL 3 BASIC17.2■□□□□ 0.34
UBQLN3Q9H347 RARRES2-205ENST00000482669 563 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
UBQLN3Q9H347 AC005606.2-201ENST00000564438 614 ntTSL 2 BASIC17.2■□□□□ 0.34
UBQLN3Q9H347 TMEM249-203ENST00000565365 975 ntAPPRIS P2 TSL 3 BASIC17.2■□□□□ 0.34
UBQLN3Q9H347 AL512604.3-201ENST00000569583 964 ntBASIC17.2■□□□□ 0.34
UBQLN3Q9H347 AC215522.2-202ENST00000633163 1143 ntTSL 5 BASIC17.2■□□□□ 0.34
UBQLN3Q9H347 MCCC1-214ENST00000610757 2410 ntTSL 5 BASIC17.2■□□□□ 0.34
UBQLN3Q9H347 BICD1-207ENST00000551848 1962 ntBASIC17.2■□□□□ 0.34
UBQLN3Q9H347 C12orf42-205ENST00000548048 1532 ntAPPRIS ALT2 TSL 5 BASIC17.2■□□□□ 0.34
UBQLN3Q9H347 VAV1-204ENST00000596764 2775 ntTSL 2 BASIC17.2■□□□□ 0.34
UBQLN3Q9H347 AP003774.1-201ENST00000316124 2340 ntTSL 2 BASIC17.2■□□□□ 0.34
UBQLN3Q9H347 KIF1BP-204ENST00000626493 2337 ntTSL 5 BASIC17.2■□□□□ 0.34
UBQLN3Q9H347 ARRB1-201ENST00000360025 1895 ntAPPRIS P3 TSL 1 (best) BASIC17.2■□□□□ 0.34
UBQLN3Q9H347 COLCA2-201ENST00000398035 1414 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
UBQLN3Q9H347 CCNA1-202ENST00000440264 1758 ntAPPRIS P1 TSL 2 BASIC17.2■□□□□ 0.34
UBQLN3Q9H347 GAS7-205ENST00000542249 1799 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
UBQLN3Q9H347 EFTUD1P1-204ENST00000560401 1798 ntBASIC17.2■□□□□ 0.34
UBQLN3Q9H347 SLC6A18-201ENST00000324642 2121 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
UBQLN3Q9H347 KRBOX1-AS1-201ENST00000447834 2134 ntTSL 2 BASIC17.2■□□□□ 0.34
Retrieved 100 of 98,524 protein–RNA pairs in 44.7 ms