Protein–RNA interactions for Protein: Q9C056

NKX6-2, Homeobox protein Nkx-6.2, humanhuman

Predicted RBP Predictions only

Length 277 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NKX6-2Q9C056 MDGA2-202ENST00000399232 5075 ntAPPRIS ALT2 TSL 1 (best) BASIC15.07■□□□□ 0
NKX6-2Q9C056 USH1C-205ENST00000527020 2159 ntTSL 1 (best) BASIC15.07■□□□□ 0
NKX6-2Q9C056 ZNF628-201ENST00000391718 3177 ntAPPRIS ALT2 BASIC15.07■□□□□ 0
NKX6-2Q9C056 SNAI3-201ENST00000332281 1732 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
NKX6-2Q9C056 AL353608.3-201ENST00000603200 2211 ntTSL 5 BASIC15.07■□□□□ 0
NKX6-2Q9C056 IRS3P-201ENST00000223076 1006 ntBASIC15.07■□□□□ 0
NKX6-2Q9C056 RAMP1-203ENST00000404910 857 ntTSL 2 BASIC15.07■□□□□ 0
NKX6-2Q9C056 AC092468.1-201ENST00000491321 562 ntTSL 4 BASIC15.07■□□□□ 0
NKX6-2Q9C056 LINC01574-201ENST00000512115 560 ntTSL 2 BASIC15.07■□□□□ 0
NKX6-2Q9C056 AC104564.5-201ENST00000584986 278 ntTSL 3 BASIC15.07■□□□□ 0
NKX6-2Q9C056 ZNF503-201ENST00000372524 3347 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
NKX6-2Q9C056 ATP6V0E2-AS1-201ENST00000461019 2973 ntTSL 1 (best) BASIC15.07■□□□□ 0
NKX6-2Q9C056 NEURL1B-201ENST00000369800 6424 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
NKX6-2Q9C056 MICALL2-201ENST00000297508 3121 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
NKX6-2Q9C056 BAIAP2-203ENST00000416299 1442 ntTSL 2 BASIC15.07■□□□□ 0
NKX6-2Q9C056 CNP-201ENST00000393888 2583 ntTSL 1 (best) BASIC15.07■□□□□ 0
NKX6-2Q9C056 DLC1-203ENST00000358919 4392 ntAPPRIS ALT2 TSL 1 (best) BASIC15.07■□□□□ 0
NKX6-2Q9C056 ZNF302-202ENST00000446502 2635 ntAPPRIS ALT2 TSL 2 BASIC15.07■□□□□ 0
NKX6-2Q9C056 SLC35B2-207ENST00000619636 2063 ntTSL 1 (best) BASIC15.07■□□□□ 0
NKX6-2Q9C056 TBC1D20-201ENST00000354200 4466 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
NKX6-2Q9C056 MADCAM1-201ENST00000215637 1572 ntAPPRIS P4 TSL 1 (best) BASIC15.07■□□□□ 0
NKX6-2Q9C056 SEPT1-201ENST00000321367 1592 ntAPPRIS P1 TSL 5 BASIC15.07■□□□□ 0
NKX6-2Q9C056 CCDC88C-203ENST00000389856 1641 ntTSL 1 (best) BASIC15.06■□□□□ 0
NKX6-2Q9C056 IGSF8-201ENST00000314485 2343 ntAPPRIS P2 TSL 1 (best) BASIC15.06■□□□□ 0
NKX6-2Q9C056 HYAL1-202ENST00000320295 2324 ntAPPRIS P1 TSL 2 BASIC15.06■□□□□ 0
NKX6-2Q9C056 CRAMP1-201ENST00000293925 7671 ntAPPRIS P1 TSL 5 BASIC15.06■□□□□ 0
NKX6-2Q9C056 RBFOX1-204ENST00000422070 1684 ntTSL 2 BASIC15.06■□□□□ 0
NKX6-2Q9C056 FADS1-204ENST00000433932 1690 ntTSL 2 BASIC15.06■□□□□ 0
NKX6-2Q9C056 GAL3ST1-201ENST00000338911 1782 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
NKX6-2Q9C056 SLC52A2-209ENST00000530047 1757 ntAPPRIS P1 TSL 2 BASIC15.06■□□□□ 0
NKX6-2Q9C056 CARD10-201ENST00000251973 3934 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
NKX6-2Q9C056 MRGPRG-AS1-201ENST00000420873 1818 ntTSL 2 BASIC15.06■□□□□ 0
NKX6-2Q9C056 NPFFR2-201ENST00000308744 1922 ntTSL 1 (best) BASIC15.06■□□□□ 0
NKX6-2Q9C056 TMUB2-212ENST00000589785 1918 ntAPPRIS P3 TSL 2 BASIC15.06■□□□□ 0
NKX6-2Q9C056 SLC45A1-202ENST00000471889 2784 ntTSL 5 BASIC15.06■□□□□ 0
NKX6-2Q9C056 DIDO1-207ENST00000395343 8477 ntAPPRIS ALT2 TSL 1 (best) BASIC15.06■□□□□ 0
NKX6-2Q9C056 PCSK5-205ENST00000545128 9538 ntAPPRIS ALT2 TSL 5 BASIC15.06■□□□□ 0
NKX6-2Q9C056 SARS2-201ENST00000221431 2057 ntAPPRIS P2 TSL 1 (best) BASIC15.06■□□□□ 0
NKX6-2Q9C056 MAGED2-203ENST00000375053 2066 ntAPPRIS P2 TSL 1 (best) BASIC15.06■□□□□ 0
NKX6-2Q9C056 IL20RA-202ENST00000367746 1244 ntTSL 2 BASIC15.06■□□□□ 0
NKX6-2Q9C056 C19orf12-205ENST00000392278 895 ntTSL 2 BASIC15.06■□□□□ 0
NKX6-2Q9C056 ZSWIM7-205ENST00000472495 703 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
NKX6-2Q9C056 NDUFS3-206ENST00000528192 561 ntTSL 5 BASIC15.06■□□□□ 0
NKX6-2Q9C056 HTATIP2-208ENST00000532505 595 ntTSL 2 BASIC15.06■□□□□ 0
NKX6-2Q9C056 FAM174B-207ENST00000555748 866 ntAPPRIS ALT2 TSL 3 BASIC15.06■□□□□ 0
NKX6-2Q9C056 CDK8-201ENST00000381527 3055 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
NKX6-2Q9C056 AGBL5-202ENST00000360131 3177 ntAPPRIS P3 TSL 1 (best) BASIC15.06■□□□□ 0
NKX6-2Q9C056 SDSL-201ENST00000345635 1397 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
NKX6-2Q9C056 PURB-201ENST00000395699 9069 ntAPPRIS P1 BASIC15.06■□□□□ 0
NKX6-2Q9C056 FUZ-212ENST00000528094 1479 ntTSL 2 BASIC15.06■□□□□ 0
NKX6-2Q9C056 SCARB1-211ENST00000546215 1597 ntTSL 1 (best) BASIC15.06■□□□□ 0
NKX6-2Q9C056 PTBP1P-201ENST00000554374 1601 ntBASIC15.06■□□□□ 0
NKX6-2Q9C056 ASH2L-212ENST00000545394 2808 ntTSL 2 BASIC15.06■□□□□ 0
NKX6-2Q9C056 ZFC3H1-206ENST00000548100 1771 ntTSL 1 (best) BASIC15.06■□□□□ 0
NKX6-2Q9C056 SLK-202ENST00000369755 7766 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
NKX6-2Q9C056 MBD1-208ENST00000398493 1845 ntTSL 5 BASIC15.06■□□□□ 0
NKX6-2Q9C056 SLC25A35-202ENST00000577745 1860 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
NKX6-2Q9C056 SURF4-209ENST00000618229 3200 ntTSL 2 BASIC15.05■□□□□ 0
NKX6-2Q9C056 TBX5-203ENST00000405440 2203 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ 0
NKX6-2Q9C056 PLEKHG2-202ENST00000409797 2205 ntAPPRIS ALT2 TSL 2 BASIC15.05■□□□□ 0
NKX6-2Q9C056 MRTO4-201ENST00000330263 2315 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ 0
NKX6-2Q9C056 C4orf50-202ENST00000531445 6860 ntAPPRIS P5 TSL 5 BASIC15.05■□□□□ 0
NKX6-2Q9C056 FLYWCH1-203ENST00000416288 4963 ntAPPRIS P3 TSL 1 (best) BASIC15.05■□□□□ 0
NKX6-2Q9C056 PMS1-212ENST00000432292 3234 ntTSL 2 BASIC15.05■□□□□ -0
NKX6-2Q9C056 TMEM218-201ENST00000279968 1034 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
NKX6-2Q9C056 TPSAB1-201ENST00000338844 1175 ntAPPRIS P2 TSL 1 (best) BASIC15.05■□□□□ -0
NKX6-2Q9C056 DNTTIP1-201ENST00000372622 1290 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
NKX6-2Q9C056 HLA-G-202ENST00000376815 851 ntBASIC15.05■□□□□ -0
NKX6-2Q9C056 HLA-G-203ENST00000376818 1127 ntBASIC15.05■□□□□ -0
NKX6-2Q9C056 FNDC3B-204ENST00000421757 946 ntTSL 1 (best) BASIC15.05■□□□□ -0
NKX6-2Q9C056 LINC01659-202ENST00000449711 917 ntTSL 3 BASIC15.05■□□□□ -0
NKX6-2Q9C056 AC091305.1-201ENST00000479476 895 ntBASIC15.05■□□□□ -0
NKX6-2Q9C056 TMEM218-215ENST00000532407 1103 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
NKX6-2Q9C056 AL137779.2-201ENST00000554859 448 ntTSL 2 BASIC15.05■□□□□ -0
NKX6-2Q9C056 FAM184B-201ENST00000265018 6622 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
NKX6-2Q9C056 GPR142-201ENST00000335666 1437 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
NKX6-2Q9C056 FUZ-216ENST00000533418 1524 ntTSL 5 BASIC15.05■□□□□ -0
NKX6-2Q9C056 CNOT9-209ENST00000627282 1621 ntTSL 2 BASIC15.05■□□□□ -0
NKX6-2Q9C056 RNF2-201ENST00000367509 1677 ntTSL 2 BASIC15.05■□□□□ -0
NKX6-2Q9C056 RNF217-211ENST00000560949 5145 ntAPPRIS ALT2 TSL 5 BASIC15.05■□□□□ -0
NKX6-2Q9C056 MCIDAS-201ENST00000513312 1736 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
NKX6-2Q9C056 RGS3-231ENST00000613049 1726 ntTSL 1 (best) BASIC15.05■□□□□ -0
NKX6-2Q9C056 NPR3-203ENST00000415167 1753 ntAPPRIS P3 TSL 1 (best) BASIC15.05■□□□□ -0
NKX6-2Q9C056 ZNF843-203ENST00000618063 1765 ntAPPRIS P2 TSL 1 (best) BASIC15.05■□□□□ -0
NKX6-2Q9C056 TREX2-206ENST00000370232 1864 ntTSL 1 (best) BASIC15.05■□□□□ -0
NKX6-2Q9C056 ATP6AP2-224ENST00000637327 1929 ntAPPRIS ALT2 TSL 2 BASIC15.05■□□□□ -0
NKX6-2Q9C056 NOP14-AS1-202ENST00000505731 1999 ntTSL 2 BASIC15.05■□□□□ -0
NKX6-2Q9C056 ENTPD2-202ENST00000355097 2095 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
NKX6-2Q9C056 AP001094.4-201ENST00000579008 2176 ntBASIC15.05■□□□□ -0
NKX6-2Q9C056 TLE2-204ENST00000455444 2253 ntTSL 5 BASIC15.05■□□□□ -0
NKX6-2Q9C056 FLJ31104-201ENST00000500093 2289 ntTSL 1 (best) BASIC15.05■□□□□ -0
NKX6-2Q9C056 ARFGAP2-229ENST00000627920 2613 ntTSL 2 BASIC15.05■□□□□ -0
NKX6-2Q9C056 NPTN-202ENST00000351217 2817 ntTSL 1 (best) BASIC15.05■□□□□ -0
NKX6-2Q9C056 EFEMP1-202ENST00000394555 3024 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
NKX6-2Q9C056 PAX6-203ENST00000379109 3182 ntAPPRIS ALT1 TSL 2 BASIC15.05■□□□□ -0
NKX6-2Q9C056 ZNF425-201ENST00000378061 3220 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
NKX6-2Q9C056 SLC8A3-203ENST00000357887 5259 ntTSL 5 BASIC15.05■□□□□ -0
NKX6-2Q9C056 SLC8A3-204ENST00000381269 5268 ntAPPRIS ALT1 TSL 1 (best) BASIC15.05■□□□□ -0
NKX6-2Q9C056 IFT140-203ENST00000426508 5270 ntAPPRIS P1 TSL 5 BASIC15.04■□□□□ -0
NKX6-2Q9C056 GCLC-213ENST00000616923 3694 ntTSL 1 (best) BASIC15.04■□□□□ -0
Retrieved 100 of 98,524 protein–RNA pairs in 29.4 ms