Protein–RNA interactions for Protein: Q9C040

TRIM2, Tripartite motif-containing protein 2, humanhuman

Predictions only

Length 744 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM2Q9C040 AC114490.1-202ENST00000311990 1887 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
TRIM2Q9C040 RTN4-207ENST00000402434 1456 ntTSL 5 BASIC17.12■□□□□ 0.33
TRIM2Q9C040 ETV2-203ENST00000402764 1487 ntAPPRIS P3 TSL 1 (best) BASIC17.12■□□□□ 0.33
TRIM2Q9C040 HAUS4-217ENST00000555367 1454 ntTSL 5 BASIC17.12■□□□□ 0.33
TRIM2Q9C040 NIPAL2-202ENST00000430223 4496 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
TRIM2Q9C040 DIO3OS-212ENST00000557661 1937 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
TRIM2Q9C040 TRIM33-201ENST00000358465 8339 ntAPPRIS P4 TSL 1 (best) BASIC17.11■□□□□ 0.33
TRIM2Q9C040 MCU-202ENST00000373053 2949 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
TRIM2Q9C040 MFSD10-205ENST00000507555 1573 ntTSL 5 BASIC17.11■□□□□ 0.33
TRIM2Q9C040 UBE2I-203ENST00000397514 2976 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
TRIM2Q9C040 FAM118A-202ENST00000405673 1612 ntTSL 5 BASIC17.11■□□□□ 0.33
TRIM2Q9C040 APBB1-210ENST00000530885 1626 ntTSL 2 BASIC17.11■□□□□ 0.33
TRIM2Q9C040 SMPD1-203ENST00000527275 2188 ntAPPRIS P3 TSL 2 BASIC17.11■□□□□ 0.33
TRIM2Q9C040 CARD10-202ENST00000403299 4113 ntAPPRIS P1 TSL 5 BASIC17.11■□□□□ 0.33
TRIM2Q9C040 SLCO4A1-201ENST00000217159 2776 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
TRIM2Q9C040 PHOSPHO2-201ENST00000359744 1125 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
TRIM2Q9C040 LINC00620-201ENST00000419618 996 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
TRIM2Q9C040 DEUP1-206ENST00000530273 410 ntTSL 3 BASIC17.11■□□□□ 0.33
TRIM2Q9C040 TSTD3-202ENST00000636394 336 ntAPPRIS ALT2 TSL 3 BASIC17.11■□□□□ 0.33
TRIM2Q9C040 PRR36-202ENST00000618550 4456 ntAPPRIS P2 TSL 5 BASIC17.11■□□□□ 0.33
TRIM2Q9C040 TEX13A-202ENST00000609007 1349 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
TRIM2Q9C040 UMOD-202ENST00000396134 2408 ntAPPRIS ALT2 TSL 2 BASIC17.11■□□□□ 0.33
TRIM2Q9C040 CHRNB1-201ENST00000306071 2557 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
TRIM2Q9C040 RPH3A-203ENST00000543106 2581 ntAPPRIS ALT2 TSL 2 BASIC17.11■□□□□ 0.33
TRIM2Q9C040 AC126763.1-201ENST00000552015 2118 ntBASIC17.11■□□□□ 0.33
TRIM2Q9C040 SIKE1-201ENST00000060969 2190 ntAPPRIS P3 TSL 1 (best) BASIC17.11■□□□□ 0.33
TRIM2Q9C040 GLCCI1-201ENST00000223145 4743 ntAPPRIS P2 TSL 1 (best) BASIC17.11■□□□□ 0.33
TRIM2Q9C040 SPTBN4-212ENST00000598249 8070 ntAPPRIS P2 TSL 1 (best) BASIC17.1■□□□□ 0.33
TRIM2Q9C040 COMP-202ENST00000425807 2292 ntTSL 2 BASIC17.1■□□□□ 0.33
TRIM2Q9C040 GAL3ST4-204ENST00000423751 1695 ntTSL 3 BASIC17.1■□□□□ 0.33
TRIM2Q9C040 PPP2R2C-206ENST00000507294 1667 ntTSL 2 BASIC17.1■□□□□ 0.33
TRIM2Q9C040 MRPL3-201ENST00000264995 1706 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
TRIM2Q9C040 CD55-206ENST00000391921 2433 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
TRIM2Q9C040 PPP1R18-201ENST00000274853 4599 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
TRIM2Q9C040 PPP1R18-205ENST00000615527 4597 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
TRIM2Q9C040 AP5S1-202ENST00000379567 1791 ntAPPRIS P1 TSL 2 BASIC17.1■□□□□ 0.33
TRIM2Q9C040 GORASP1-206ENST00000422110 2523 ntTSL 2 BASIC17.1■□□□□ 0.33
TRIM2Q9C040 PCOLCE-AS1-201ENST00000442166 2537 ntTSL 2 BASIC17.1■□□□□ 0.33
TRIM2Q9C040 EPB41L2-211ENST00000525271 2568 ntTSL 2 BASIC17.1■□□□□ 0.33
TRIM2Q9C040 LURAP1-201ENST00000371980 1854 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
TRIM2Q9C040 VAV1-204ENST00000596764 2775 ntTSL 2 BASIC17.1■□□□□ 0.33
TRIM2Q9C040 CHRND-201ENST00000258385 2112 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
TRIM2Q9C040 MSGN1-201ENST00000281047 606 ntAPPRIS P1 BASIC17.1■□□□□ 0.33
TRIM2Q9C040 C9orf129-201ENST00000375419 1154 ntAPPRIS P1 TSL 5 BASIC17.1■□□□□ 0.33
TRIM2Q9C040 HDAC11-203ENST00000402271 1018 ntTSL 3 BASIC17.1■□□□□ 0.33
TRIM2Q9C040 PLEKHB2-203ENST00000404460 1167 ntTSL 2 BASIC17.1■□□□□ 0.33
TRIM2Q9C040 SMIM1-201ENST00000444870 546 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
TRIM2Q9C040 KRBOX1-AS1-201ENST00000447834 2134 ntTSL 2 BASIC17.1■□□□□ 0.33
TRIM2Q9C040 AC091153.3-201ENST00000497885 472 ntTSL 2 BASIC17.1■□□□□ 0.33
TRIM2Q9C040 AC117500.4-201ENST00000542797 617 ntTSL 3 BASIC17.1■□□□□ 0.33
TRIM2Q9C040 SLC25A1P4-201ENST00000567977 778 ntBASIC17.1■□□□□ 0.33
TRIM2Q9C040 GRAP-204ENST00000573099 846 ntTSL 3 BASIC17.1■□□□□ 0.33
TRIM2Q9C040 C17orf62-230ENST00000583617 866 ntTSL 5 BASIC17.1■□□□□ 0.33
TRIM2Q9C040 UBL5-202ENST00000586895 432 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
TRIM2Q9C040 FMR1-AS1_2.1-201ENST00000613724 127 ntBASIC17.1■□□□□ 0.33
TRIM2Q9C040 PHOSPHO2-206ENST00000616481 1252 ntAPPRIS P1 TSL 3 BASIC17.1■□□□□ 0.33
TRIM2Q9C040 PHOSPHO2-208ENST00000617738 1053 ntAPPRIS P1 TSL 2 BASIC17.1■□□□□ 0.33
TRIM2Q9C040 ADORA1-208ENST00000618295 862 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
TRIM2Q9C040 RBP4-202ENST00000371467 1314 ntAPPRIS P1 TSL 5 BASIC17.1■□□□□ 0.33
TRIM2Q9C040 PKMYT1-203ENST00000431515 2308 ntTSL 2 BASIC17.1■□□□□ 0.33
TRIM2Q9C040 TWIST2-202ENST00000612363 1404 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
TRIM2Q9C040 PCDHA8-202ENST00000531613 5260 ntAPPRIS P2 TSL 1 (best) BASIC17.1■□□□□ 0.33
TRIM2Q9C040 STRN4-202ENST00000391910 3628 ntAPPRIS ALT1 TSL 5 BASIC17.1■□□□□ 0.33
TRIM2Q9C040 HLA-G-205ENST00000428701 1578 ntAPPRIS P2 BASIC17.1■□□□□ 0.33
TRIM2Q9C040 ZNF655-202ENST00000320583 1601 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
TRIM2Q9C040 AL109659.2-201ENST00000606809 1674 ntBASIC17.1■□□□□ 0.33
TRIM2Q9C040 FOXO3-202ENST00000406360 7341 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
TRIM2Q9C040 MAP4K4-205ENST00000350878 7640 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
TRIM2Q9C040 MUTYH-202ENST00000355498 1776 ntAPPRIS ALT2 TSL 1 (best) BASIC17.1■□□□□ 0.33
TRIM2Q9C040 DOC2A-208ENST00000564944 1782 ntAPPRIS P1 TSL 5 BASIC17.1■□□□□ 0.33
TRIM2Q9C040 CROCC2-201ENST00000443866 5382 ntAPPRIS P1 TSL 5 BASIC17.1■□□□□ 0.33
TRIM2Q9C040 PTPDC1-202ENST00000375360 4517 ntAPPRIS ALT2 TSL 1 (best) BASIC17.09■□□□□ 0.33
TRIM2Q9C040 FOXP4-202ENST00000373057 3300 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
TRIM2Q9C040 HCLS1-201ENST00000314583 2000 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
TRIM2Q9C040 TCAP-201ENST00000309889 2123 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
TRIM2Q9C040 PRDM14-201ENST00000276594 2344 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
TRIM2Q9C040 MAFF-207ENST00000538999 2365 ntTSL 2 BASIC17.09■□□□□ 0.33
TRIM2Q9C040 TAF6-211ENST00000453269 2464 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
TRIM2Q9C040 C1QTNF1-201ENST00000311661 2624 ntTSL 2 BASIC17.09■□□□□ 0.33
TRIM2Q9C040 KDM6A-213ENST00000611820 5924 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
TRIM2Q9C040 RPS20-210ENST00000523936 899 ntTSL 2 BASIC17.09■□□□□ 0.33
TRIM2Q9C040 LINC02256-201ENST00000561999 366 ntTSL 3 BASIC17.09■□□□□ 0.33
TRIM2Q9C040 C16orf74-202ENST00000602583 1237 ntAPPRIS ALT2 TSL 1 (best) BASIC17.09■□□□□ 0.33
TRIM2Q9C040 KRT8P45-201ENST00000414328 1447 ntBASIC17.09■□□□□ 0.33
TRIM2Q9C040 SRMS-201ENST00000217188 1516 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
TRIM2Q9C040 C5orf30-203ENST00000515669 1573 ntAPPRIS P1 TSL 3 BASIC17.09■□□□□ 0.33
TRIM2Q9C040 PLCH2-203ENST00000378486 4837 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
TRIM2Q9C040 PLCH2-204ENST00000419816 4837 ntAPPRIS P1 TSL 5 BASIC17.09■□□□□ 0.33
TRIM2Q9C040 PDE9A-209ENST00000398227 1606 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
TRIM2Q9C040 LRP1-204ENST00000553277 1693 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
TRIM2Q9C040 TFCP2-205ENST00000549867 1727 ntTSL 5 BASIC17.09■□□□□ 0.33
TRIM2Q9C040 FKBP8-206ENST00000596558 1756 ntAPPRIS ALT1 TSL 2 BASIC17.09■□□□□ 0.33
TRIM2Q9C040 DOK4-218ENST00000569548 1848 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
TRIM2Q9C040 P2RX2-208ENST00000542301 1881 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
TRIM2Q9C040 BICD1-207ENST00000551848 1962 ntBASIC17.09■□□□□ 0.33
TRIM2Q9C040 PDXK-219ENST00000621478 1967 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
TRIM2Q9C040 DOC2B-203ENST00000613549 6048 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
TRIM2Q9C040 CTSD-212ENST00000637815 2003 ntAPPRIS ALT2 TSL 5 BASIC17.09■□□□□ 0.33
TRIM2Q9C040 KLHL21-202ENST00000377663 6445 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
TRIM2Q9C040 PRMT5-204ENST00000397441 2418 ntTSL 2 BASIC17.09■□□□□ 0.33
Retrieved 100 of 98,524 protein–RNA pairs in 13.6 ms