Protein–RNA interactions for Protein: Q9C037

TRIM4, E3 ubiquitin-protein ligase TRIM4, humanhuman

Predictions only

Length 500 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM4Q9C037 TSTD1-201ENST00000318289 626 ntAPPRIS P3 TSL 1 (best) BASIC18.53■□□□□ 0.56
TRIM4Q9C037 C6orf48-206ENST00000375641 602 ntAPPRIS P1 TSL 2 BASIC18.53■□□□□ 0.56
TRIM4Q9C037 TPPP3-202ENST00000393957 1058 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
TRIM4Q9C037 CHCHD10-201ENST00000401675 691 ntAPPRIS P1 TSL 5 BASIC18.53■□□□□ 0.56
TRIM4Q9C037 MIR1238-201ENST00000408483 83 ntBASIC18.53■□□□□ 0.56
TRIM4Q9C037 AL162231.1-203ENST00000416454 465 ntAPPRIS ALT2 TSL 2 BASIC18.53■□□□□ 0.56
TRIM4Q9C037 BX890604.1-205ENST00000425492 856 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
TRIM4Q9C037 AL596442.1-201ENST00000429305 429 ntTSL 2 BASIC18.53■□□□□ 0.56
TRIM4Q9C037 FBXO32-202ENST00000443022 1227 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
TRIM4Q9C037 NT5C2-211ENST00000470299 249 ntTSL 5 BASIC18.53■□□□□ 0.56
TRIM4Q9C037 HES2-206ENST00000489730 730 ntTSL 2 BASIC18.53■□□□□ 0.56
TRIM4Q9C037 NDUFA13-203ENST00000503283 825 ntTSL 2 BASIC18.53■□□□□ 0.56
TRIM4Q9C037 ZNF346-209ENST00000512315 1575 ntTSL 2 BASIC18.53■□□□□ 0.56
TRIM4Q9C037 PTP4A3-206ENST00000524028 963 ntTSL 5 BASIC18.53■□□□□ 0.56
TRIM4Q9C037 AKIP1-206ENST00000525005 1128 ntTSL 2 BASIC18.53■□□□□ 0.56
TRIM4Q9C037 AF131216.3-201ENST00000525867 1099 ntTSL 2 BASIC18.53■□□□□ 0.56
TRIM4Q9C037 RPUSD2-202ENST00000559271 1558 ntAPPRIS ALT2 TSL 2 BASIC18.53■□□□□ 0.56
TRIM4Q9C037 LY6L-201ENST00000562505 988 ntAPPRIS P1 TSL 5 BASIC18.53■□□□□ 0.56
TRIM4Q9C037 ANAPC11-207ENST00000572639 578 ntAPPRIS P1 TSL 3 BASIC18.53■□□□□ 0.56
TRIM4Q9C037 ZNF561-AS1-202ENST00000586614 568 ntTSL 5 BASIC18.53■□□□□ 0.56
TRIM4Q9C037 SLC1A5-205ENST00000594991 2031 ntTSL 2 BASIC18.53■□□□□ 0.56
TRIM4Q9C037 SNED1-204ENST00000401884 4538 ntAPPRIS ALT2 TSL 5 BASIC18.53■□□□□ 0.56
TRIM4Q9C037 SCARB1-203ENST00000415380 2731 ntTSL 2 BASIC18.53■□□□□ 0.56
TRIM4Q9C037 ROPN1-209ENST00000495093 1376 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
TRIM4Q9C037 CD24-204ENST00000619133 2513 ntAPPRIS P3 TSL 2 BASIC18.53■□□□□ 0.56
TRIM4Q9C037 CRACR2B-207ENST00000528542 1792 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
TRIM4Q9C037 IL15-201ENST00000296545 2472 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
TRIM4Q9C037 KCNQ2-207ENST00000370224 3004 ntTSL 5 BASIC18.52■□□□□ 0.56
TRIM4Q9C037 SYT7-208ENST00000542670 1887 ntTSL 5 BASIC18.52■□□□□ 0.56
TRIM4Q9C037 AHSA2-202ENST00000394457 6574 ntTSL 1 (best) BASIC18.52■□□□□ 0.56
TRIM4Q9C037 CFP-201ENST00000247153 1713 ntAPPRIS P2 TSL 5 BASIC18.52■□□□□ 0.56
TRIM4Q9C037 AC009133.6-201ENST00000609618 2252 ntAPPRIS P1 TSL 5 BASIC18.52■□□□□ 0.56
TRIM4Q9C037 RXRB-202ENST00000374685 2846 ntAPPRIS ALT1 TSL 1 (best) BASIC18.52■□□□□ 0.56
TRIM4Q9C037 IGSF9-206ENST00000611023 2663 ntTSL 1 (best) BASIC18.52■□□□□ 0.56
TRIM4Q9C037 FDFT1-209ENST00000525900 1596 ntTSL 5 BASIC18.52■□□□□ 0.56
TRIM4Q9C037 SLC22A17-211ENST00000637426 1563 ntAPPRIS ALT2 TSL 1 (best) BASIC18.52■□□□□ 0.56
TRIM4Q9C037 ZNF821-221ENST00000611294 1833 ntTSL 3 BASIC18.52■□□□□ 0.56
TRIM4Q9C037 CMTM8-201ENST00000307526 1174 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
TRIM4Q9C037 AC007161.3-201ENST00000469183 637 ntTSL 5 BASIC18.52■□□□□ 0.56
TRIM4Q9C037 MRPL36-202ENST00000505059 610 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
TRIM4Q9C037 NMU-205ENST00000511469 756 ntTSL 3 BASIC18.52■□□□□ 0.56
TRIM4Q9C037 METRN-205ENST00000568415 612 ntAPPRIS ALT2 TSL 3 BASIC18.52■□□□□ 0.56
TRIM4Q9C037 WWOX-216ENST00000569818 525 ntBASIC18.52■□□□□ 0.56
TRIM4Q9C037 CIRBP-213ENST00000587323 1092 ntTSL 5 BASIC18.52■□□□□ 0.56
TRIM4Q9C037 NAT14-204ENST00000591590 1011 ntTSL 1 (best) BASIC18.52■□□□□ 0.56
TRIM4Q9C037 AC003005.1-201ENST00000601674 582 ntAPPRIS P5 TSL 2 BASIC18.52■□□□□ 0.56
TRIM4Q9C037 AL158152.2-201ENST00000602703 235 ntTSL 3 BASIC18.52■□□□□ 0.56
TRIM4Q9C037 DBNL-217ENST00000468694 2068 ntAPPRIS ALT2 TSL 2 BASIC18.52■□□□□ 0.56
TRIM4Q9C037 NPTX2-201ENST00000265634 2700 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
TRIM4Q9C037 ADPGK-AS1-201ENST00000563592 2730 ntTSL 2 BASIC18.52■□□□□ 0.56
TRIM4Q9C037 ADNP2-201ENST00000262198 5393 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
TRIM4Q9C037 ALKBH6-213ENST00000486389 1525 ntTSL 3 BASIC18.52■□□□□ 0.56
TRIM4Q9C037 LHX8-202ENST00000356261 1764 ntAPPRIS ALT2 TSL 1 (best) BASIC18.52■□□□□ 0.55
TRIM4Q9C037 SRF-201ENST00000265354 4202 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.55
TRIM4Q9C037 ANKS3-202ENST00000446014 2265 ntTSL 5 BASIC18.52■□□□□ 0.55
TRIM4Q9C037 AKNA-205ENST00000374079 2138 ntTSL 1 (best) BASIC18.52■□□□□ 0.55
TRIM4Q9C037 PDE6B-202ENST00000429163 2120 ntTSL 2 BASIC18.52■□□□□ 0.55
TRIM4Q9C037 AC124067.4-201ENST00000519691 2379 ntBASIC18.52■□□□□ 0.55
TRIM4Q9C037 IRF3-221ENST00000598808 1468 ntTSL 5 BASIC18.52■□□□□ 0.55
TRIM4Q9C037 AC018553.1-201ENST00000616682 1458 ntBASIC18.52■□□□□ 0.55
TRIM4Q9C037 EARS2-206ENST00000563232 1709 ntTSL 1 (best) BASIC18.52■□□□□ 0.55
TRIM4Q9C037 ZADH2-201ENST00000322342 7732 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.55
TRIM4Q9C037 MAFF-201ENST00000338483 2490 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
TRIM4Q9C037 EIF4G3-205ENST00000400422 5762 ntAPPRIS ALT2 TSL 1 (best) BASIC18.51■□□□□ 0.55
TRIM4Q9C037 TOM1L2-210ENST00000542206 1320 ntTSL 2 BASIC18.51■□□□□ 0.55
TRIM4Q9C037 AC116351.2-201ENST00000606540 1585 ntBASIC18.51■□□□□ 0.55
TRIM4Q9C037 ELMOD1-206ENST00000531234 1832 ntTSL 2 BASIC18.51■□□□□ 0.55
TRIM4Q9C037 EPOR-208ENST00000592375 2086 ntTSL 2 BASIC18.51■□□□□ 0.55
TRIM4Q9C037 ELF2-204ENST00000394235 4012 ntAPPRIS P1 TSL 5 BASIC18.51■□□□□ 0.55
TRIM4Q9C037 GATA6-201ENST00000269216 3770 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
TRIM4Q9C037 RPP25L-201ENST00000297613 1092 ntAPPRIS P1 TSL 2 BASIC18.51■□□□□ 0.55
TRIM4Q9C037 HRAS-201ENST00000311189 894 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
TRIM4Q9C037 CLIC6-201ENST00000349499 3806 ntAPPRIS P3 TSL 1 (best) BASIC18.51■□□□□ 0.55
TRIM4Q9C037 SULT1A1-202ENST00000350842 1282 ntTSL 3 BASIC18.51■□□□□ 0.55
TRIM4Q9C037 AC004540.1-203ENST00000421862 907 ntTSL 5 BASIC18.51■□□□□ 0.55
TRIM4Q9C037 RBM17P1-201ENST00000453646 1190 ntBASIC18.51■□□□□ 0.55
TRIM4Q9C037 ARF3-208ENST00000541959 807 ntAPPRIS P1 TSL 5 BASIC18.51■□□□□ 0.55
TRIM4Q9C037 AF186192.3-201ENST00000583427 947 ntBASIC18.51■□□□□ 0.55
TRIM4Q9C037 GEMIN7-203ENST00000591607 848 ntAPPRIS P1 TSL 3 BASIC18.51■□□□□ 0.55
TRIM4Q9C037 FFAR2-202ENST00000599180 2133 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
TRIM4Q9C037 SUPT4H1-202ENST00000577396 1643 ntTSL 2 BASIC18.51■□□□□ 0.55
TRIM4Q9C037 ATOH1-201ENST00000306011 2212 ntAPPRIS P1 BASIC18.51■□□□□ 0.55
TRIM4Q9C037 PDE4A-202ENST00000344979 2579 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
TRIM4Q9C037 AC118553.2-203ENST00000639037 2590 ntAPPRIS P5 TSL 5 BASIC18.51■□□□□ 0.55
TRIM4Q9C037 ATF5-201ENST00000423777 2069 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
TRIM4Q9C037 DMPK-204ENST00000447742 2754 ntAPPRIS ALT2 TSL 1 (best) BASIC18.51■□□□□ 0.55
TRIM4Q9C037 AL162311.3-201ENST00000555918 2867 ntTSL 2 BASIC18.51■□□□□ 0.55
TRIM4Q9C037 TSPAN3-201ENST00000267970 6467 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
TRIM4Q9C037 LEFTY2-201ENST00000366820 2287 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
TRIM4Q9C037 ARHGDIA-202ENST00000400721 1568 ntTSL 2 BASIC18.51■□□□□ 0.55
TRIM4Q9C037 LINC01465-201ENST00000408887 1940 ntBASIC18.51■□□□□ 0.55
TRIM4Q9C037 SEPT7-206ENST00000435235 1584 ntTSL 2 BASIC18.51■□□□□ 0.55
TRIM4Q9C037 DUT-202ENST00000455976 1935 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
TRIM4Q9C037 TMEM119-201ENST00000392806 2707 ntAPPRIS P2 TSL 1 (best) BASIC18.51■□□□□ 0.55
TRIM4Q9C037 LRCH3-207ENST00000441090 2034 ntTSL 2 BASIC18.5■□□□□ 0.55
TRIM4Q9C037 TBL2-201ENST00000305632 3161 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
TRIM4Q9C037 HTR7P1-201ENST00000538670 1336 ntBASIC18.5■□□□□ 0.55
TRIM4Q9C037 SLC52A2-209ENST00000530047 1757 ntAPPRIS P1 TSL 2 BASIC18.5■□□□□ 0.55
TRIM4Q9C037 FER1L4-210ENST00000615531 5998 ntBASIC18.5■□□□□ 0.55
TRIM4Q9C037 GSEC-201ENST00000626810 2289 ntTSL 2 BASIC18.5■□□□□ 0.55
Retrieved 100 of 98,524 protein–RNA pairs in 53.3 ms