Protein–RNA interactions for Protein: Q9BZ76

CNTNAP3, Contactin-associated protein-like 3, humanhuman

Predictions only

Length 1,288 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CNTNAP3Q9BZ76 AC124066.1-201ENST00000581122 1660 ntTSL 5 BASIC17.67■□□□□ 0.42
CNTNAP3Q9BZ76 SPAST-203ENST00000615843 5212 ntAPPRIS P4 TSL 1 (best) BASIC17.67■□□□□ 0.42
CNTNAP3Q9BZ76 AC116565.2-201ENST00000637674 1854 ntTSL 2 BASIC17.67■□□□□ 0.42
CNTNAP3Q9BZ76 CDX4-201ENST00000373514 1515 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
CNTNAP3Q9BZ76 P4HB-203ENST00000439918 1502 ntTSL 5 BASIC17.67■□□□□ 0.42
CNTNAP3Q9BZ76 AC023830.1-201ENST00000569678 1543 ntTSL 2 BASIC17.67■□□□□ 0.42
CNTNAP3Q9BZ76 ATOH8-201ENST00000306279 2438 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
CNTNAP3Q9BZ76 IQCJ-SCHIP1-204ENST00000485419 2445 ntAPPRIS ALT2 TSL 2 BASIC17.67■□□□□ 0.42
CNTNAP3Q9BZ76 CAMK2B-216ENST00000440254 2097 ntAPPRIS P4 TSL 1 (best) BASIC17.67■□□□□ 0.42
CNTNAP3Q9BZ76 IRX3-201ENST00000329734 2601 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
CNTNAP3Q9BZ76 ERLIN1-203ENST00000421367 5792 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
CNTNAP3Q9BZ76 SLC46A3-202ENST00000380814 2121 ntAPPRIS ALT1 TSL 1 (best) BASIC17.66■□□□□ 0.42
CNTNAP3Q9BZ76 NPR3-203ENST00000415167 1753 ntAPPRIS P3 TSL 1 (best) BASIC17.66■□□□□ 0.42
CNTNAP3Q9BZ76 CEL-201ENST00000372080 2384 ntAPPRIS P1 TSL 5 BASIC17.66■□□□□ 0.42
CNTNAP3Q9BZ76 HLA-J-201ENST00000462773 1622 ntBASIC17.66■□□□□ 0.42
CNTNAP3Q9BZ76 ST3GAL4-204ENST00000444328 1812 ntAPPRIS ALT1 TSL 5 BASIC17.66■□□□□ 0.42
CNTNAP3Q9BZ76 PPP1R12B-212ENST00000480184 1808 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
CNTNAP3Q9BZ76 PF4-201ENST00000296029 604 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
CNTNAP3Q9BZ76 MRPS16-201ENST00000372940 866 ntTSL 2 BASIC17.66■□□□□ 0.42
CNTNAP3Q9BZ76 SYNGR1-205ENST00000406293 564 ntTSL 2 BASIC17.66■□□□□ 0.42
CNTNAP3Q9BZ76 PNPO-202ENST00000434554 1196 ntTSL 2 BASIC17.66■□□□□ 0.42
CNTNAP3Q9BZ76 AC091180.3-201ENST00000506504 963 ntTSL 3 BASIC17.66■□□□□ 0.42
CNTNAP3Q9BZ76 AC119403.1-201ENST00000520090 776 ntTSL 5 BASIC17.66■□□□□ 0.42
CNTNAP3Q9BZ76 PTGIR-204ENST00000596260 1009 ntTSL 2 BASIC17.66■□□□□ 0.42
CNTNAP3Q9BZ76 AC012645.4-201ENST00000610691 1061 ntBASIC17.66■□□□□ 0.42
CNTNAP3Q9BZ76 CD24-206ENST00000620405 586 ntAPPRIS ALT2 TSL 2 BASIC17.66■□□□□ 0.42
CNTNAP3Q9BZ76 CR381653.1-203ENST00000625153 577 ntTSL 5 BASIC17.66■□□□□ 0.42
CNTNAP3Q9BZ76 TREX2-206ENST00000370232 1864 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
CNTNAP3Q9BZ76 FUBP3-201ENST00000319725 3124 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
CNTNAP3Q9BZ76 AC036111.1-201ENST00000533973 1582 ntBASIC17.66■□□□□ 0.42
CNTNAP3Q9BZ76 AKT1-211ENST00000554848 1595 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
CNTNAP3Q9BZ76 AC005329.3-201ENST00000626781 1366 ntTSL 5 BASIC17.66■□□□□ 0.42
CNTNAP3Q9BZ76 NDUFAF3-202ENST00000326925 2012 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
CNTNAP3Q9BZ76 TNFRSF19-202ENST00000382258 1625 ntAPPRIS P4 TSL 1 (best) BASIC17.65■□□□□ 0.42
CNTNAP3Q9BZ76 BDKRB2-201ENST00000539359 1600 ntTSL 2 BASIC17.65■□□□□ 0.42
CNTNAP3Q9BZ76 MATN4-204ENST00000372756 2077 ntAPPRIS P2 TSL 1 (best) BASIC17.65■□□□□ 0.42
CNTNAP3Q9BZ76 SMN1-204ENST00000506163 1445 ntAPPRIS ALT2 TSL 1 (best) BASIC17.65■□□□□ 0.42
CNTNAP3Q9BZ76 ANXA8L1-203ENST00000613703 1874 ntTSL 2 BASIC17.65■□□□□ 0.42
CNTNAP3Q9BZ76 MYOZ3-203ENST00000517768 1451 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
CNTNAP3Q9BZ76 FAM213A-202ENST00000372185 1723 ntTSL 2 BASIC17.65■□□□□ 0.42
CNTNAP3Q9BZ76 SNCA-205ENST00000394991 1290 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
CNTNAP3Q9BZ76 CT47A4-201ENST00000415858 1298 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
CNTNAP3Q9BZ76 CT47A9-201ENST00000417256 1298 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
CNTNAP3Q9BZ76 CT47A6-201ENST00000419194 1298 ntAPPRIS P1 TSL 5 BASIC17.65■□□□□ 0.42
CNTNAP3Q9BZ76 CT47A10-201ENST00000430448 1298 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
CNTNAP3Q9BZ76 CT47A5-201ENST00000439466 1298 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
CNTNAP3Q9BZ76 CT47A3-201ENST00000441330 1298 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
CNTNAP3Q9BZ76 CT47A8-201ENST00000457977 1298 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
CNTNAP3Q9BZ76 CT47A2-201ENST00000458218 1298 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
CNTNAP3Q9BZ76 RN7SL606P-201ENST00000472779 293 ntBASIC17.65■□□□□ 0.42
CNTNAP3Q9BZ76 AL449423.1-201ENST00000578935 435 ntTSL 3 BASIC17.65■□□□□ 0.42
CNTNAP3Q9BZ76 MTDHP3-201ENST00000594186 672 ntBASIC17.65■□□□□ 0.42
CNTNAP3Q9BZ76 PXK-211ENST00000484288 2031 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
CNTNAP3Q9BZ76 FGFR3-210ENST00000613647 4438 ntTSL 5 BASIC17.65■□□□□ 0.42
CNTNAP3Q9BZ76 MFSD1-201ENST00000264266 1594 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
CNTNAP3Q9BZ76 ZNF282-203ENST00000479907 1815 ntTSL 2 BASIC17.65■□□□□ 0.42
CNTNAP3Q9BZ76 RFXAP-201ENST00000255476 2304 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
CNTNAP3Q9BZ76 VGF-201ENST00000249330 2575 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
CNTNAP3Q9BZ76 TERF2IP-201ENST00000300086 2118 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
CNTNAP3Q9BZ76 PRMT2-210ENST00000458387 1874 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
CNTNAP3Q9BZ76 FOXP3-206ENST00000557224 1371 ntTSL 2 BASIC17.65■□□□□ 0.42
CNTNAP3Q9BZ76 MYH14-208ENST00000598205 6137 ntAPPRIS P3 TSL 5 BASIC17.65■□□□□ 0.42
CNTNAP3Q9BZ76 GALNT10-201ENST00000297107 5961 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
CNTNAP3Q9BZ76 RPUSD1-202ENST00000561734 2159 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.42
CNTNAP3Q9BZ76 STXBP6-203ENST00000419632 1970 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
CNTNAP3Q9BZ76 CLDN6-202ENST00000396925 1739 ntAPPRIS P1 TSL 5 BASIC17.64■□□□□ 0.41
CNTNAP3Q9BZ76 BTG3-202ENST00000348354 1456 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
CNTNAP3Q9BZ76 ARID1A-201ENST00000324856 8577 ntAPPRIS P3 TSL 1 (best) BASIC17.64■□□□□ 0.41
CNTNAP3Q9BZ76 FBXL15-202ENST00000369956 2344 ntAPPRIS ALT1 TSL 1 (best) BASIC17.64■□□□□ 0.41
CNTNAP3Q9BZ76 BDKRB1-202ENST00000553356 1526 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
CNTNAP3Q9BZ76 UPK2-201ENST00000264031 916 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
CNTNAP3Q9BZ76 PLEKHH3-201ENST00000293349 2987 ntAPPRIS ALT1 TSL 5 BASIC17.64■□□□□ 0.41
CNTNAP3Q9BZ76 NQO2-203ENST00000380441 1021 ntTSL 5 BASIC17.64■□□□□ 0.41
CNTNAP3Q9BZ76 HCCS-203ENST00000380763 1000 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
CNTNAP3Q9BZ76 UPK3A-202ENST00000396082 627 ntAPPRIS ALT2 TSL 1 (best) BASIC17.64■□□□□ 0.41
CNTNAP3Q9BZ76 MRPL36-204ENST00000508987 686 ntAPPRIS P1 TSL 2 BASIC17.64■□□□□ 0.41
CNTNAP3Q9BZ76 YBX1P5-201ENST00000509441 847 ntBASIC17.64■□□□□ 0.41
CNTNAP3Q9BZ76 DCTD-213ENST00000510370 794 ntAPPRIS P1 TSL 5 BASIC17.64■□□□□ 0.41
CNTNAP3Q9BZ76 AC124067.2-201ENST00000521989 510 ntTSL 2 BASIC17.64■□□□□ 0.41
CNTNAP3Q9BZ76 NTRK3-206ENST00000540489 2145 ntTSL 5 BASIC17.64■□□□□ 0.41
CNTNAP3Q9BZ76 AC009533.2-201ENST00000543664 586 ntBASIC17.64■□□□□ 0.41
CNTNAP3Q9BZ76 AC138304.1-201ENST00000563841 424 ntTSL 3 BASIC17.64■□□□□ 0.41
CNTNAP3Q9BZ76 AC004771.3-201ENST00000574260 551 ntTSL 4 BASIC17.64■□□□□ 0.41
CNTNAP3Q9BZ76 LIMD2-211ENST00000583211 1298 ntTSL 3 BASIC17.64■□□□□ 0.41
CNTNAP3Q9BZ76 BNIP3P18-201ENST00000593976 575 ntBASIC17.64■□□□□ 0.41
CNTNAP3Q9BZ76 AL662799.1-201ENST00000630418 496 ntTSL 5 BASIC17.64■□□□□ 0.41
CNTNAP3Q9BZ76 ATP5L-201ENST00000300688 1577 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
CNTNAP3Q9BZ76 CHRDL2-203ENST00000376332 1867 ntAPPRIS ALT2 TSL 1 (best) BASIC17.64■□□□□ 0.41
CNTNAP3Q9BZ76 TRMT2A-204ENST00000439169 2473 ntTSL 5 BASIC17.64■□□□□ 0.41
CNTNAP3Q9BZ76 CXCR3-202ENST00000373693 1624 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
CNTNAP3Q9BZ76 PATZ1-201ENST00000215919 2516 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
CNTNAP3Q9BZ76 PSIP1-201ENST00000380715 1966 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
CNTNAP3Q9BZ76 TACC3-213ENST00000617535 1693 ntTSL 5 BASIC17.64■□□□□ 0.41
CNTNAP3Q9BZ76 FNDC8-201ENST00000158009 1388 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
CNTNAP3Q9BZ76 ESYT3-201ENST00000289135 1356 ntTSL 5 BASIC17.64■□□□□ 0.41
CNTNAP3Q9BZ76 ZFYVE21-202ENST00000311141 1383 ntAPPRIS P3 TSL 1 (best) BASIC17.64■□□□□ 0.41
CNTNAP3Q9BZ76 CADPS-201ENST00000283269 4591 ntAPPRIS P4 TSL 1 (best) BASIC17.64■□□□□ 0.41
CNTNAP3Q9BZ76 ACOT2-201ENST00000238651 1774 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
CNTNAP3Q9BZ76 TH-202ENST00000333684 1535 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
CNTNAP3Q9BZ76 ZNF467-201ENST00000302017 2553 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Retrieved 100 of 98,524 protein–RNA pairs in 49.9 ms