Protein–RNA interactions for Protein: Q9BTD1

SHANK2-AS3, Putative uncharacterized protein SHANK2-AS3, humanhuman

Predictions only

Length 123 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHANK2-AS3Q9BTD1 DIAPH1-204ENST00000398557 5789 ntAPPRIS ALT2 TSL 5 BASIC14.33□□□□□ -0.12
SHANK2-AS3Q9BTD1 HTR7P1-201ENST00000538670 1336 ntBASIC14.33□□□□□ -0.12
SHANK2-AS3Q9BTD1 IGSF9-206ENST00000611023 2663 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
SHANK2-AS3Q9BTD1 ADAMTS7-201ENST00000388820 5490 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
SHANK2-AS3Q9BTD1 PAQR6-201ENST00000292291 1908 ntAPPRIS P3 TSL 1 (best) BASIC14.33□□□□□ -0.12
SHANK2-AS3Q9BTD1 CRYBB2P1-202ENST00000382734 1364 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
SHANK2-AS3Q9BTD1 CCDC50-202ENST00000392456 2454 ntAPPRIS P4 TSL 1 (best) BASIC14.33□□□□□ -0.12
SHANK2-AS3Q9BTD1 EDA-203ENST00000374552 5278 ntAPPRIS P3 TSL 1 (best) BASIC14.33□□□□□ -0.12
SHANK2-AS3Q9BTD1 OR6D1P-202ENST00000641007 5290 ntBASIC14.33□□□□□ -0.12
SHANK2-AS3Q9BTD1 LYPD3-201ENST00000244333 1694 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
SHANK2-AS3Q9BTD1 ACBD4-215ENST00000592162 1684 ntTSL 5 BASIC14.33□□□□□ -0.12
SHANK2-AS3Q9BTD1 PDZD3-202ENST00000355547 2252 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
SHANK2-AS3Q9BTD1 AKIP1-207ENST00000529876 1421 ntTSL 2 BASIC14.32□□□□□ -0.12
SHANK2-AS3Q9BTD1 IFNL4-203ENST00000634680 1421 ntAPPRIS ALT2 TSL 1 (best) BASIC14.32□□□□□ -0.12
SHANK2-AS3Q9BTD1 MROH1-202ENST00000423230 1712 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
SHANK2-AS3Q9BTD1 ITGA7-201ENST00000257879 4120 ntAPPRIS P3 TSL 1 (best) BASIC14.32□□□□□ -0.12
SHANK2-AS3Q9BTD1 MCOLN1-201ENST00000264079 2082 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
SHANK2-AS3Q9BTD1 CDK13-201ENST00000181839 7298 ntAPPRIS P4 TSL 1 (best) BASIC14.32□□□□□ -0.12
SHANK2-AS3Q9BTD1 IAH1-202ENST00000470914 2137 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
SHANK2-AS3Q9BTD1 COPS7A-210ENST00000539735 1832 ntAPPRIS P1 TSL 5 BASIC14.32□□□□□ -0.12
SHANK2-AS3Q9BTD1 XKR6-203ENST00000416569 3382 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
SHANK2-AS3Q9BTD1 ZNF419-204ENST00000415379 2186 ntAPPRIS ALT2 TSL 2 BASIC14.32□□□□□ -0.12
SHANK2-AS3Q9BTD1 APOA5-201ENST00000227665 1897 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
SHANK2-AS3Q9BTD1 SDC2-202ENST00000518385 1583 ntTSL 5 BASIC14.32□□□□□ -0.12
SHANK2-AS3Q9BTD1 C19orf57-208ENST00000591586 1559 ntAPPRIS ALT2 TSL 5 BASIC14.32□□□□□ -0.12
SHANK2-AS3Q9BTD1 C19orf54-203ENST00000470681 2521 ntTSL 2 BASIC14.32□□□□□ -0.12
SHANK2-AS3Q9BTD1 MDK-204ENST00000395569 686 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
SHANK2-AS3Q9BTD1 ESRRAP1-201ENST00000400596 1257 ntBASIC14.32□□□□□ -0.12
SHANK2-AS3Q9BTD1 UBE2F-203ENST00000409633 837 ntTSL 3 BASIC14.32□□□□□ -0.12
SHANK2-AS3Q9BTD1 AL353807.1-201ENST00000427475 662 ntBASIC14.32□□□□□ -0.12
SHANK2-AS3Q9BTD1 RPS2P4-201ENST00000476944 856 ntBASIC14.32□□□□□ -0.12
SHANK2-AS3Q9BTD1 NDUFA13-203ENST00000503283 825 ntTSL 2 BASIC14.32□□□□□ -0.12
SHANK2-AS3Q9BTD1 AC009090.2-201ENST00000565829 472 ntTSL 3 BASIC14.32□□□□□ -0.12
SHANK2-AS3Q9BTD1 AC026271.3-201ENST00000571884 352 ntBASIC14.32□□□□□ -0.12
SHANK2-AS3Q9BTD1 SQSTM1-216ENST00000626660 274 ntTSL 5 BASIC14.32□□□□□ -0.12
SHANK2-AS3Q9BTD1 SLC35A3-218ENST00000639994 1114 ntTSL 5 BASIC14.32□□□□□ -0.12
SHANK2-AS3Q9BTD1 A4GALT-201ENST00000249005 2020 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
SHANK2-AS3Q9BTD1 FOXP1-214ENST00000493089 2703 ntAPPRIS ALT1 TSL 2 BASIC14.32□□□□□ -0.12
SHANK2-AS3Q9BTD1 ROPN1-209ENST00000495093 1376 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
SHANK2-AS3Q9BTD1 PTGER3-209ENST00000460330 1447 ntAPPRIS ALT2 TSL 1 (best) BASIC14.32□□□□□ -0.12
SHANK2-AS3Q9BTD1 AGAP2-201ENST00000257897 5388 ntAPPRIS P3 TSL 1 (best) BASIC14.32□□□□□ -0.12
SHANK2-AS3Q9BTD1 HNRNPUL1-203ENST00000378215 2864 ntTSL 2 BASIC14.32□□□□□ -0.12
SHANK2-AS3Q9BTD1 ZNF394-201ENST00000337673 2179 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
SHANK2-AS3Q9BTD1 CLN3-206ENST00000360019 1840 ntTSL 2 BASIC14.31□□□□□ -0.12
SHANK2-AS3Q9BTD1 MBD1-208ENST00000398493 1845 ntTSL 5 BASIC14.31□□□□□ -0.12
SHANK2-AS3Q9BTD1 AJUBA-202ENST00000361265 2569 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
SHANK2-AS3Q9BTD1 POLI-207ENST00000579434 2705 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
SHANK2-AS3Q9BTD1 MYLKP1-201ENST00000509077 1580 ntBASIC14.31□□□□□ -0.12
SHANK2-AS3Q9BTD1 RARRES1-201ENST00000237696 1952 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
SHANK2-AS3Q9BTD1 RXRB-202ENST00000374685 2846 ntAPPRIS ALT1 TSL 1 (best) BASIC14.31□□□□□ -0.12
SHANK2-AS3Q9BTD1 FAM213B-205ENST00000444521 2827 ntAPPRIS ALT2 TSL 2 BASIC14.31□□□□□ -0.12
SHANK2-AS3Q9BTD1 SNX17-201ENST00000233575 2044 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
SHANK2-AS3Q9BTD1 FAM50B-201ENST00000380272 1628 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
SHANK2-AS3Q9BTD1 CIRBP-202ENST00000413636 1606 ntTSL 2 BASIC14.31□□□□□ -0.12
SHANK2-AS3Q9BTD1 BEGAIN-211ENST00000637646 2911 ntTSL 5 BASIC14.31□□□□□ -0.12
SHANK2-AS3Q9BTD1 NGLY1-207ENST00000428257 2534 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
SHANK2-AS3Q9BTD1 FAM98C-201ENST00000252530 1271 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
SHANK2-AS3Q9BTD1 DCLK1-203ENST00000379892 2101 ntTSL 5 BASIC14.31□□□□□ -0.12
SHANK2-AS3Q9BTD1 PSMG1-202ENST00000380900 907 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
SHANK2-AS3Q9BTD1 NAA60-204ENST00000421765 1045 ntTSL 2 BASIC14.31□□□□□ -0.12
SHANK2-AS3Q9BTD1 CCDC107-206ENST00000426546 1242 ntAPPRIS P3 TSL 1 (best) BASIC14.31□□□□□ -0.12
SHANK2-AS3Q9BTD1 CKBP1-201ENST00000565489 1086 ntBASIC14.31□□□□□ -0.12
SHANK2-AS3Q9BTD1 KRTAP5-11-203ENST00000617152 558 ntAPPRIS ALT2 TSL 5 BASIC14.31□□□□□ -0.12
SHANK2-AS3Q9BTD1 AC011298.2-201ENST00000617989 482 ntBASIC14.31□□□□□ -0.12
SHANK2-AS3Q9BTD1 ABBA01031674.1-201ENST00000635145 728 ntBASIC14.31□□□□□ -0.12
SHANK2-AS3Q9BTD1 HGFAC-201ENST00000382774 2159 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
SHANK2-AS3Q9BTD1 SMN1-209ENST00000514951 1308 ntTSL 2 BASIC14.31□□□□□ -0.12
SHANK2-AS3Q9BTD1 AK4-208ENST00000546702 1335 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
SHANK2-AS3Q9BTD1 SYNM-202ENST00000336292 7394 ntAPPRIS P4 TSL 1 (best) BASIC14.31□□□□□ -0.12
SHANK2-AS3Q9BTD1 ZDHHC8P1-204ENST00000433168 2309 ntTSL 2 BASIC14.31□□□□□ -0.12
SHANK2-AS3Q9BTD1 SEC61A2-201ENST00000298428 1893 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
SHANK2-AS3Q9BTD1 TEFM-205ENST00000581216 1891 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
SHANK2-AS3Q9BTD1 AC093677.2-201ENST00000600169 1863 ntBASIC14.31□□□□□ -0.12
SHANK2-AS3Q9BTD1 KRT16P1-201ENST00000399124 1418 ntBASIC14.31□□□□□ -0.12
SHANK2-AS3Q9BTD1 SMPD4-202ENST00000409031 4896 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
SHANK2-AS3Q9BTD1 TAL1-201ENST00000294339 5001 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
SHANK2-AS3Q9BTD1 AC008556.1-201ENST00000610908 2040 ntBASIC14.31□□□□□ -0.12
SHANK2-AS3Q9BTD1 ARHGEF18-201ENST00000319670 5212 ntAPPRIS P3 TSL 1 (best) BASIC14.3□□□□□ -0.12
SHANK2-AS3Q9BTD1 CSK-201ENST00000220003 2767 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
SHANK2-AS3Q9BTD1 CYP7B1-201ENST00000310193 2202 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
SHANK2-AS3Q9BTD1 LGI4-201ENST00000310123 2814 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
SHANK2-AS3Q9BTD1 MZT1-201ENST00000377818 2299 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
SHANK2-AS3Q9BTD1 CMIP-209ENST00000566513 2288 ntTSL 5 BASIC14.3□□□□□ -0.12
SHANK2-AS3Q9BTD1 MSI2-203ENST00000416426 1714 ntTSL 2 BASIC14.3□□□□□ -0.12
SHANK2-AS3Q9BTD1 TMEM104-202ENST00000417024 1781 ntTSL 2 BASIC14.3□□□□□ -0.12
SHANK2-AS3Q9BTD1 SELENOF-207ENST00000611507 1785 ntTSL 5 BASIC14.3□□□□□ -0.12
SHANK2-AS3Q9BTD1 SLC44A3-201ENST00000271227 2388 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
SHANK2-AS3Q9BTD1 CD276-203ENST00000537340 2439 ntTSL 2 BASIC14.3□□□□□ -0.12
SHANK2-AS3Q9BTD1 LRRC27-201ENST00000344079 1809 ntAPPRIS ALT2 TSL 2 BASIC14.3□□□□□ -0.12
SHANK2-AS3Q9BTD1 TMEM223-201ENST00000307366 1288 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
SHANK2-AS3Q9BTD1 CMTM8-201ENST00000307526 1174 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
SHANK2-AS3Q9BTD1 PHOSPHO2-201ENST00000359744 1125 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
SHANK2-AS3Q9BTD1 NMRK1-201ENST00000361092 1185 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
SHANK2-AS3Q9BTD1 METTL5-206ENST00000409965 880 ntAPPRIS P2 TSL 1 (best) BASIC14.3□□□□□ -0.12
SHANK2-AS3Q9BTD1 CHAC1-203ENST00000487220 853 ntTSL 3 BASIC14.3□□□□□ -0.12
SHANK2-AS3Q9BTD1 KRT18P41-201ENST00000518924 1277 ntBASIC14.3□□□□□ -0.12
SHANK2-AS3Q9BTD1 TMEM218-207ENST00000528724 1117 ntTSL 5 BASIC14.3□□□□□ -0.12
SHANK2-AS3Q9BTD1 TMEM218-214ENST00000532156 954 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
SHANK2-AS3Q9BTD1 EMC9-206ENST00000560403 872 ntTSL 2 BASIC14.3□□□□□ -0.12
SHANK2-AS3Q9BTD1 ICAM2-207ENST00000579687 1154 ntAPPRIS P1 TSL 3 BASIC14.3□□□□□ -0.12
Retrieved 100 of 98,524 protein–RNA pairs in 25.2 ms