Protein–RNA interactions for Protein: Q9BRG1

VPS25, Vacuolar protein-sorting-associated protein 25, humanhuman

Predictions only

Length 176 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS25Q9BRG1 KLC1-206ENST00000389744 3250 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
VPS25Q9BRG1 WASHC2C-208ENST00000537517 4417 ntAPPRIS ALT2 TSL 2 BASIC12.98□□□□□ -0.33
VPS25Q9BRG1 GGT7-201ENST00000336431 2642 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
VPS25Q9BRG1 AGBL5-202ENST00000360131 3177 ntAPPRIS P3 TSL 1 (best) BASIC12.98□□□□□ -0.33
VPS25Q9BRG1 TBC1D2-203ENST00000375064 3174 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
VPS25Q9BRG1 AC010931.2-202ENST00000514871 2566 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
VPS25Q9BRG1 ALG12-201ENST00000330817 5350 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
VPS25Q9BRG1 CLDN14-204ENST00000399137 1942 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
VPS25Q9BRG1 TEX13C-201ENST00000632600 5095 ntAPPRIS P1 BASIC12.98□□□□□ -0.33
VPS25Q9BRG1 ODF2-202ENST00000372791 2375 ntAPPRIS P3 TSL 1 (best) BASIC12.98□□□□□ -0.33
VPS25Q9BRG1 CCP110-203ENST00000396212 5549 ntAPPRIS P3 TSL 1 (best) BASIC12.98□□□□□ -0.33
VPS25Q9BRG1 TSSC2-204ENST00000529482 2337 ntTSL 2 BASIC12.98□□□□□ -0.33
VPS25Q9BRG1 LOR-201ENST00000368742 1230 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
VPS25Q9BRG1 AC011551.1-201ENST00000614101 683 ntBASIC12.98□□□□□ -0.33
VPS25Q9BRG1 CBFB-201ENST00000290858 3136 ntAPPRIS P3 TSL 1 (best) BASIC12.98□□□□□ -0.33
VPS25Q9BRG1 AKNA-204ENST00000374075 5038 ntAPPRIS ALT2 TSL 1 (best) BASIC12.98□□□□□ -0.33
VPS25Q9BRG1 KCNK4-201ENST00000394525 1673 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
VPS25Q9BRG1 ALDH5A1-204ENST00000491546 1699 ntTSL 5 BASIC12.98□□□□□ -0.33
VPS25Q9BRG1 ERG28-201ENST00000256319 2633 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
VPS25Q9BRG1 MAPK7-204ENST00000395604 3077 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
VPS25Q9BRG1 ANKRD23-201ENST00000318357 2597 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
VPS25Q9BRG1 RALGPS2-204ENST00000367635 5834 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
VPS25Q9BRG1 IL6ST-209ENST00000502326 3007 ntAPPRIS P1 TSL 5 BASIC12.98□□□□□ -0.33
VPS25Q9BRG1 CLIC6-202ENST00000360731 3860 ntAPPRIS ALT2 TSL 1 (best) BASIC12.98□□□□□ -0.33
VPS25Q9BRG1 DIP2A-201ENST00000400274 7023 ntAPPRIS ALT2 TSL 5 BASIC12.98□□□□□ -0.33
VPS25Q9BRG1 CCNE1-201ENST00000262643 2043 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
VPS25Q9BRG1 AFDN-203ENST00000366806 5962 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
VPS25Q9BRG1 SPATA6-204ENST00000396199 4964 ntTSL 2 BASIC12.98□□□□□ -0.33
VPS25Q9BRG1 EIF4ENIF1-206ENST00000397525 3695 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
VPS25Q9BRG1 GTF2IRD2B-208ENST00000619142 1932 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
VPS25Q9BRG1 RTN4RL1-201ENST00000331238 3625 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
VPS25Q9BRG1 VGLL3-202ENST00000398399 10400 ntAPPRIS P3 TSL 1 (best) BASIC12.98□□□□□ -0.33
VPS25Q9BRG1 AC005324.3-201ENST00000455584 5514 ntAPPRIS P1 TSL 2 BASIC12.97□□□□□ -0.33
VPS25Q9BRG1 RAPGEFL1-212ENST00000620260 3855 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
VPS25Q9BRG1 RBFOX1-215ENST00000553186 2196 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
VPS25Q9BRG1 BCL11B-201ENST00000345514 7603 ntAPPRIS ALT2 TSL 1 (best) BASIC12.97□□□□□ -0.33
VPS25Q9BRG1 ADAM15-204ENST00000359280 2874 ntAPPRIS ALT2 TSL 1 (best) BASIC12.97□□□□□ -0.33
VPS25Q9BRG1 PPP2R5D-202ENST00000394110 2894 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
VPS25Q9BRG1 SEC16A-202ENST00000290037 8982 ntAPPRIS ALT2 TSL 1 (best) BASIC12.97□□□□□ -0.33
VPS25Q9BRG1 DMPK-202ENST00000343373 3227 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
VPS25Q9BRG1 REEP2-201ENST00000254901 2099 ntAPPRIS P3 TSL 1 (best) BASIC12.97□□□□□ -0.33
VPS25Q9BRG1 FAM53B-202ENST00000337318 5431 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
VPS25Q9BRG1 CTU2-201ENST00000312060 1672 ntAPPRIS P3 TSL 5 BASIC12.97□□□□□ -0.33
VPS25Q9BRG1 RBFOX1-204ENST00000422070 1684 ntTSL 2 BASIC12.97□□□□□ -0.33
VPS25Q9BRG1 GMPPB-203ENST00000480687 6108 ntAPPRIS P1 TSL 2 BASIC12.97□□□□□ -0.33
VPS25Q9BRG1 ACSL3-202ENST00000392066 3147 ntAPPRIS P1 TSL 5 BASIC12.97□□□□□ -0.33
VPS25Q9BRG1 TMEM139-201ENST00000359333 2383 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
VPS25Q9BRG1 PARD6A-201ENST00000219255 1248 ntAPPRIS P3 TSL 1 (best) BASIC12.97□□□□□ -0.33
VPS25Q9BRG1 AL118558.1-203ENST00000553701 447 ntTSL 3 BASIC12.97□□□□□ -0.33
VPS25Q9BRG1 AC022413.1-201ENST00000624602 984 ntBASIC12.97□□□□□ -0.33
VPS25Q9BRG1 ADCY1-204ENST00000621543 1647 ntTSL 5 BASIC12.97□□□□□ -0.33
VPS25Q9BRG1 LAG3-201ENST00000203629 1974 ntAPPRIS P2 TSL 1 (best) BASIC12.97□□□□□ -0.33
VPS25Q9BRG1 BCL11A-203ENST00000358510 2697 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
VPS25Q9BRG1 GRK5-202ENST00000392870 2654 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
VPS25Q9BRG1 RUNDC3B-202ENST00000338056 4099 ntTSL 2 BASIC12.97□□□□□ -0.33
VPS25Q9BRG1 EEF1A1-202ENST00000316292 4441 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
VPS25Q9BRG1 CYP4F3-201ENST00000221307 5050 ntAPPRIS P3 TSL 1 (best) BASIC12.97□□□□□ -0.33
VPS25Q9BRG1 HOXC10-201ENST00000303460 1936 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
VPS25Q9BRG1 BIRC2-206ENST00000530675 1927 ntTSL 2 BASIC12.97□□□□□ -0.33
VPS25Q9BRG1 NRN1-203ENST00000616243 1556 ntAPPRIS P1 TSL 4 BASIC12.97□□□□□ -0.33
VPS25Q9BRG1 ARFGAP2-229ENST00000627920 2613 ntTSL 2 BASIC12.97□□□□□ -0.33
VPS25Q9BRG1 DCBLD1-202ENST00000338728 3626 ntAPPRIS ALT2 TSL 5 BASIC12.97□□□□□ -0.33
VPS25Q9BRG1 RBBP8-201ENST00000327155 3288 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
VPS25Q9BRG1 PA2G4-201ENST00000303305 2577 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
VPS25Q9BRG1 TRIM56-201ENST00000306085 10952 ntAPPRIS P2 TSL 1 (best) BASIC12.97□□□□□ -0.33
VPS25Q9BRG1 STAB1-201ENST00000321725 7928 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
VPS25Q9BRG1 GCFC2-202ENST00000409857 2516 ntTSL 5 BASIC12.97□□□□□ -0.33
VPS25Q9BRG1 BCAR1-207ENST00000538440 3192 ntAPPRIS ALT2 TSL 2 BASIC12.97□□□□□ -0.33
VPS25Q9BRG1 CHAT-201ENST00000337653 2458 ntAPPRIS P4 TSL 1 (best) BASIC12.97□□□□□ -0.33
VPS25Q9BRG1 ZNF211-201ENST00000240731 2440 ntAPPRIS P4 TSL 2 BASIC12.97□□□□□ -0.33
VPS25Q9BRG1 SLC2A8-215ENST00000610552 1763 ntTSL 3 BASIC12.97□□□□□ -0.33
VPS25Q9BRG1 AC244021.1-201ENST00000417218 3662 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
VPS25Q9BRG1 USP25-201ENST00000285679 3973 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
VPS25Q9BRG1 SESN3-202ENST00000416495 1408 ntTSL 1 (best) BASIC12.96□□□□□ -0.33
VPS25Q9BRG1 LINC01529-204ENST00000636474 1715 ntBASIC12.96□□□□□ -0.33
VPS25Q9BRG1 CNNM2-203ENST00000433628 3857 ntAPPRIS ALT1 TSL 2 BASIC12.96□□□□□ -0.33
VPS25Q9BRG1 ANKRD11-203ENST00000378330 9132 ntAPPRIS P2 TSL 1 (best) BASIC12.96□□□□□ -0.33
VPS25Q9BRG1 KLHDC4-204ENST00000353170 1663 ntAPPRIS ALT2 TSL 1 (best) BASIC12.96□□□□□ -0.33
VPS25Q9BRG1 PPP1R12B-202ENST00000356764 1687 ntTSL 1 (best) BASIC12.96□□□□□ -0.33
VPS25Q9BRG1 AL109910.2-201ENST00000607733 1953 ntTSL 2 BASIC12.96□□□□□ -0.33
VPS25Q9BRG1 NAA15-201ENST00000296543 6222 ntAPPRIS P2 TSL 1 (best) BASIC12.96□□□□□ -0.33
VPS25Q9BRG1 CLASP2-203ENST00000359576 7141 ntAPPRIS P5 TSL 5 BASIC12.96□□□□□ -0.33
VPS25Q9BRG1 UMODL1-203ENST00000400424 5516 ntAPPRIS ALT2 TSL 1 (best) BASIC12.96□□□□□ -0.33
VPS25Q9BRG1 RBM14-201ENST00000310137 2828 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
VPS25Q9BRG1 XRCC3-209ENST00000554913 2539 ntAPPRIS P1 TSL 2 BASIC12.96□□□□□ -0.33
VPS25Q9BRG1 JPH2-201ENST00000342272 1923 ntTSL 1 (best) BASIC12.96□□□□□ -0.33
VPS25Q9BRG1 PCBP3-203ENST00000400308 1911 ntTSL 1 (best) BASIC12.96□□□□□ -0.33
VPS25Q9BRG1 WDR20-202ENST00000322340 3060 ntTSL 1 (best) BASIC12.96□□□□□ -0.33
VPS25Q9BRG1 CENPN-202ENST00000305850 2481 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
VPS25Q9BRG1 SLC39A7-201ENST00000374675 2153 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
VPS25Q9BRG1 ASCL2-201ENST00000331289 1852 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
VPS25Q9BRG1 NSMF-203ENST00000371472 1852 ntAPPRIS P3 TSL 2 BASIC12.96□□□□□ -0.33
VPS25Q9BRG1 B4GALNT1-202ENST00000418555 1861 ntTSL 2 BASIC12.96□□□□□ -0.33
VPS25Q9BRG1 LBX2-AS1-201ENST00000548978 1852 ntTSL 3 BASIC12.96□□□□□ -0.33
VPS25Q9BRG1 PNCK-215ENST00000447676 1585 ntTSL 2 BASIC12.96□□□□□ -0.33
VPS25Q9BRG1 RAPH1-202ENST00000319170 9808 ntAPPRIS P4 TSL 1 (best) BASIC12.96□□□□□ -0.33
VPS25Q9BRG1 VEGFA-202ENST00000324450 954 ntTSL 1 (best) BASIC12.96□□□□□ -0.33
VPS25Q9BRG1 VEGFA-203ENST00000372055 1286 ntTSL 1 (best) BASIC12.96□□□□□ -0.33
VPS25Q9BRG1 MLEC-202ENST00000412616 841 ntTSL 3 BASIC12.96□□□□□ -0.33
VPS25Q9BRG1 VEGFA-208ENST00000417285 1081 ntAPPRIS ALT2 TSL 1 (best) BASIC12.96□□□□□ -0.33
Retrieved 100 of 98,524 protein–RNA pairs in 33.7 ms