Protein–RNA interactions for Protein: Q99835

SMO, Smoothened homolog, humanhuman

Predictions only

Length 787 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMOQ99835 KRT9-201ENST00000246662 2290 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
SMOQ99835 ARFRP1-207ENST00000612157 1698 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
SMOQ99835 ERCC2-205ENST00000485403 1538 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
SMOQ99835 RAI14-201ENST00000265109 5092 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
SMOQ99835 MBD3-207ENST00000590550 2782 ntTSL 2 BASIC19.46■□□□□ 0.71
SMOQ99835 TMEM53-202ENST00000372237 2310 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
SMOQ99835 ZDHHC17-201ENST00000426126 5259 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
SMOQ99835 FAM187B-201ENST00000324675 1184 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
SMOQ99835 PVRIG2P-201ENST00000435460 978 ntBASIC19.46■□□□□ 0.71
SMOQ99835 PTK2-216ENST00000519881 863 ntTSL 3 BASIC19.46■□□□□ 0.71
SMOQ99835 SPHK2-211ENST00000600537 2136 ntAPPRIS ALT2 TSL 2 BASIC19.46■□□□□ 0.71
SMOQ99835 STARD4-203ENST00000502322 1467 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
SMOQ99835 CEP55-201ENST00000371485 2638 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
SMOQ99835 ADAMTS10-205ENST00000595838 2458 ntTSL 2 BASIC19.46■□□□□ 0.71
SMOQ99835 IL4I1-201ENST00000341114 2349 ntAPPRIS P4 TSL 1 (best) BASIC19.46■□□□□ 0.71
SMOQ99835 ENOPH1-201ENST00000273920 2025 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
SMOQ99835 TNXA-203ENST00000507684 2038 ntBASIC19.46■□□□□ 0.71
SMOQ99835 USP36-203ENST00000542802 6063 ntAPPRIS P2 TSL 1 (best) BASIC19.46■□□□□ 0.71
SMOQ99835 CCDC63-202ENST00000545036 1887 ntAPPRIS ALT2 TSL 2 BASIC19.45■□□□□ 0.7
SMOQ99835 CIDEB-202ENST00000336557 2409 ntAPPRIS P1 TSL 2 BASIC19.45■□□□□ 0.7
SMOQ99835 UROS-202ENST00000368778 1556 ntTSL 2 BASIC19.45■□□□□ 0.7
SMOQ99835 LAT-204ENST00000395461 1448 ntAPPRIS ALT2 TSL 1 (best) BASIC19.45■□□□□ 0.7
SMOQ99835 MIB2-203ENST00000378712 2890 ntTSL 2 BASIC19.45■□□□□ 0.7
SMOQ99835 GPR32-201ENST00000270590 1269 ntAPPRIS P1 BASIC19.45■□□□□ 0.7
SMOQ99835 ISCA1-202ENST00000326094 1264 ntTSL 3 BASIC19.45■□□□□ 0.7
SMOQ99835 TSPY8-203ENST00000383005 435 ntTSL 5 BASIC19.45■□□□□ 0.7
SMOQ99835 BECN2-201ENST00000419583 1296 ntAPPRIS P1 BASIC19.45■□□□□ 0.7
SMOQ99835 PCED1CP-201ENST00000419887 785 ntBASIC19.45■□□□□ 0.7
SMOQ99835 EEF1D-243ENST00000532400 419 ntTSL 3 BASIC19.45■□□□□ 0.7
SMOQ99835 AP000777.3-201ENST00000538705 491 ntTSL 3 BASIC19.45■□□□□ 0.7
SMOQ99835 GSTZ1-218ENST00000557053 580 ntTSL 3 BASIC19.45■□□□□ 0.7
SMOQ99835 CLN6-214ENST00000636314 442 ntTSL 3 BASIC19.45■□□□□ 0.7
SMOQ99835 PBK-203ENST00000522944 1499 ntTSL 2 BASIC19.45■□□□□ 0.7
SMOQ99835 ANKRD24-201ENST00000262970 3711 ntAPPRIS ALT2 TSL 5 BASIC19.45■□□□□ 0.7
SMOQ99835 TEAD2-202ENST00000377214 2440 ntAPPRIS ALT1 TSL 2 BASIC19.45■□□□□ 0.7
SMOQ99835 KLC1-217ENST00000554280 2426 ntTSL 5 BASIC19.45■□□□□ 0.7
SMOQ99835 RGMB-AS1-201ENST00000498871 1903 ntTSL 2 BASIC19.45■□□□□ 0.7
SMOQ99835 DEF8-211ENST00000563795 1767 ntTSL 5 BASIC19.44■□□□□ 0.7
SMOQ99835 DUS1L-202ENST00000354321 2151 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
SMOQ99835 LINC01819-201ENST00000422351 2156 ntTSL 5 BASIC19.44■□□□□ 0.7
SMOQ99835 PPP1R3F-202ENST00000376188 2443 ntTSL 2 BASIC19.44■□□□□ 0.7
SMOQ99835 STN1-201ENST00000224950 1417 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
SMOQ99835 ACY1-206ENST00000476351 1409 ntTSL 3 BASIC19.44■□□□□ 0.7
SMOQ99835 CACNA1B-201ENST00000277549 7158 ntAPPRIS ALT2 TSL 1 (best) BASIC19.44■□□□□ 0.7
SMOQ99835 CACNA1B-202ENST00000277551 7158 ntAPPRIS ALT2 TSL 5 BASIC19.44■□□□□ 0.7
SMOQ99835 AC005082.1-201ENST00000413042 2259 ntBASIC19.44■□□□□ 0.7
SMOQ99835 IFRD2-204ENST00000436390 2275 ntAPPRIS P1 TSL 2 BASIC19.44■□□□□ 0.7
SMOQ99835 ASZ1-201ENST00000284629 1865 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
SMOQ99835 AANAT-202ENST00000392492 1005 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
SMOQ99835 CRELD2-204ENST00000407217 1230 ntAPPRIS ALT2 TSL 1 (best) BASIC19.44■□□□□ 0.7
SMOQ99835 PLXND1-205ENST00000504689 546 ntTSL 3 BASIC19.44■□□□□ 0.7
SMOQ99835 REEP1-209ENST00000541910 969 ntTSL 2 BASIC19.44■□□□□ 0.7
SMOQ99835 GOLGA2P7-203ENST00000557881 896 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
SMOQ99835 FBXL22-204ENST00000638704 729 ntAPPRIS ALT2 TSL 2 BASIC19.44■□□□□ 0.7
SMOQ99835 WEE1-202ENST00000450114 2799 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
SMOQ99835 AC093503.3-201ENST00000624917 2352 ntBASIC19.44■□□□□ 0.7
SMOQ99835 ZNF623-203ENST00000526926 2612 ntAPPRIS ALT2 TSL 2 BASIC19.44■□□□□ 0.7
SMOQ99835 ZACN-201ENST00000334586 1335 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
SMOQ99835 AKIRIN1-201ENST00000372984 1330 ntTSL 2 BASIC19.44■□□□□ 0.7
SMOQ99835 FAM198A-202ENST00000430121 3121 ntAPPRIS P2 TSL 5 BASIC19.44■□□□□ 0.7
SMOQ99835 HUNK-201ENST00000270112 7385 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
SMOQ99835 ZFYVE21-202ENST00000311141 1383 ntAPPRIS P3 TSL 1 (best) BASIC19.44■□□□□ 0.7
SMOQ99835 STX6-204ENST00000542060 4809 ntTSL 2 BASIC19.44■□□□□ 0.7
SMOQ99835 SCARF2-202ENST00000622235 3232 ntAPPRIS ALT2 TSL 1 (best) BASIC19.44■□□□□ 0.7
SMOQ99835 SDF4-201ENST00000263741 2079 ntAPPRIS P3 TSL 1 (best) BASIC19.44■□□□□ 0.7
SMOQ99835 EHBP1-209ENST00000431489 5076 ntAPPRIS ALT2 TSL 1 (best) BASIC19.44■□□□□ 0.7
SMOQ99835 SLBP-201ENST00000318386 1635 ntAPPRIS ALT1 TSL 3 BASIC19.43■□□□□ 0.7
SMOQ99835 PKMYT1-203ENST00000431515 2308 ntTSL 2 BASIC19.43■□□□□ 0.7
SMOQ99835 ATPIF1-202ENST00000465645 1855 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
SMOQ99835 NARFL-201ENST00000251588 2112 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
SMOQ99835 MEN1-205ENST00000377316 2868 ntTSL 5 BASIC19.43■□□□□ 0.7
SMOQ99835 ACHE-205ENST00000419336 1906 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
SMOQ99835 SLC6A9-201ENST00000357730 2168 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
SMOQ99835 AC135782.1-201ENST00000537498 2154 ntTSL 2 BASIC19.43■□□□□ 0.7
SMOQ99835 AC120498.9-201ENST00000339021 3867 ntBASIC19.43■□□□□ 0.7
SMOQ99835 ACD-215ENST00000620761 1483 ntAPPRIS ALT2 TSL 1 (best) BASIC19.43■□□□□ 0.7
SMOQ99835 TFAP4-201ENST00000204517 2215 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
SMOQ99835 EIF3B-202ENST00000397011 2966 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
SMOQ99835 FAM160A2-201ENST00000265978 3481 ntAPPRIS P3 TSL 1 (best) BASIC19.43■□□□□ 0.7
SMOQ99835 HCCS-201ENST00000321143 2277 ntAPPRIS P1 TSL 2 BASIC19.43■□□□□ 0.7
SMOQ99835 ATP9A-202ENST00000338821 8106 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
SMOQ99835 AGER-205ENST00000375069 1538 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
SMOQ99835 MADCAM1-203ENST00000382683 603 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
SMOQ99835 FXN-203ENST00000396366 922 ntTSL 2 BASIC19.43■□□□□ 0.7
SMOQ99835 ZNF337-AS1-204ENST00000428254 817 ntTSL 5 BASIC19.43■□□□□ 0.7
SMOQ99835 PDZD7-203ENST00000470414 1057 ntTSL 2 BASIC19.43■□□□□ 0.7
SMOQ99835 AC116353.4-201ENST00000507279 576 ntTSL 4 BASIC19.43■□□□□ 0.7
SMOQ99835 FXYD7-203ENST00000586063 456 ntAPPRIS ALT2 TSL 3 BASIC19.43■□□□□ 0.7
SMOQ99835 AC116407.4-201ENST00000623319 1061 ntBASIC19.43■□□□□ 0.7
SMOQ99835 SUFU-201ENST00000369899 1839 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
SMOQ99835 ATP1B1-202ENST00000367816 2608 ntAPPRIS P1 TSL 5 BASIC19.43■□□□□ 0.7
SMOQ99835 NECTIN3-206ENST00000485303 3664 ntAPPRIS P3 TSL 1 (best) BASIC19.43■□□□□ 0.7
SMOQ99835 NTMT1-203ENST00000372483 1315 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
SMOQ99835 MMAB-204ENST00000537236 1342 ntTSL 3 BASIC19.43■□□□□ 0.7
SMOQ99835 MCU-202ENST00000373053 2949 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
SMOQ99835 P2RY6-212ENST00000618468 2431 ntAPPRIS P1 TSL 3 BASIC19.43■□□□□ 0.7
SMOQ99835 FAM110A-201ENST00000246100 1619 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
SMOQ99835 CENPT-215ENST00000564817 1638 ntAPPRIS ALT2 TSL 5 BASIC19.43■□□□□ 0.7
SMOQ99835 LDLRAD4-211ENST00000587757 2171 ntTSL 2 BASIC19.43■□□□□ 0.7
SMOQ99835 SLC38A10-201ENST00000288439 2708 ntAPPRIS P3 TSL 1 (best) BASIC19.43■□□□□ 0.7
Retrieved 100 of 98,524 protein–RNA pairs in 28.5 ms