Protein–RNA interactions for Protein: Q96RR1

TWNK, Twinkle protein, mitochondrial, humanhuman

Predictions only

Length 684 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TWNKQ96RR1 C5orf30-203ENST00000515669 1573 ntAPPRIS P1 TSL 3 BASIC19.7■□□□□ 0.74
TWNKQ96RR1 CD55-206ENST00000391921 2433 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
TWNKQ96RR1 SCAND1-203ENST00000615116 1371 ntAPPRIS P1 TSL 5 BASIC19.7■□□□□ 0.74
TWNKQ96RR1 ADAMTS9-202ENST00000459780 2871 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
TWNKQ96RR1 BAIAP2-203ENST00000416299 1442 ntTSL 2 BASIC19.69■□□□□ 0.74
TWNKQ96RR1 ZNF74-203ENST00000403682 2789 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
TWNKQ96RR1 GNA12-201ENST00000275364 4378 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
TWNKQ96RR1 TMEM250-201ENST00000418388 2823 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
TWNKQ96RR1 EDN3-204ENST00000371028 2397 ntAPPRIS P4 TSL 5 BASIC19.69■□□□□ 0.74
TWNKQ96RR1 AC104581.1-202ENST00000635932 2618 ntBASIC19.69■□□□□ 0.74
TWNKQ96RR1 TMEM235-201ENST00000374946 2409 ntTSL 5 BASIC19.69■□□□□ 0.74
TWNKQ96RR1 RHEBL1-201ENST00000301068 1210 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
TWNKQ96RR1 NUDT8-201ENST00000301490 809 ntAPPRIS P3 TSL 1 (best) BASIC19.69■□□□□ 0.74
TWNKQ96RR1 AP000593.1-201ENST00000393668 712 ntBASIC19.69■□□□□ 0.74
TWNKQ96RR1 SGO1-208ENST00000437051 1187 ntAPPRIS ALT2 TSL 1 (best) BASIC19.69■□□□□ 0.74
TWNKQ96RR1 AL136307.1-201ENST00000454882 411 ntTSL 2 BASIC19.69■□□□□ 0.74
TWNKQ96RR1 MFGE8-203ENST00000542878 1172 ntTSL 2 BASIC19.69■□□□□ 0.74
TWNKQ96RR1 FAM104A-205ENST00000581110 512 ntTSL 2 BASIC19.69■□□□□ 0.74
TWNKQ96RR1 ZNF534-205ENST00000617900 1085 ntTSL 2 BASIC19.69■□□□□ 0.74
TWNKQ96RR1 CYB561-205ENST00000542042 1302 ntTSL 2 BASIC19.69■□□□□ 0.74
TWNKQ96RR1 UROS-202ENST00000368778 1556 ntTSL 2 BASIC19.69■□□□□ 0.74
TWNKQ96RR1 ATP6V1D-201ENST00000216442 1845 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
TWNKQ96RR1 GRM2-204ENST00000442933 2064 ntTSL 5 BASIC19.69■□□□□ 0.74
TWNKQ96RR1 PRDM14-201ENST00000276594 2344 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
TWNKQ96RR1 LRCH4-201ENST00000310300 2552 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
TWNKQ96RR1 AC138028.1-201ENST00000333666 2137 ntTSL 2 BASIC19.69■□□□□ 0.74
TWNKQ96RR1 SAMD11-210ENST00000616016 2391 ntTSL 5 BASIC19.69■□□□□ 0.74
TWNKQ96RR1 SAMD11-215ENST00000618779 2368 ntAPPRIS ALT2 TSL 5 BASIC19.69■□□□□ 0.74
TWNKQ96RR1 BRMS1L-201ENST00000216807 2657 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
TWNKQ96RR1 ZBED3-AS1-208ENST00000512001 1668 ntTSL 3 BASIC19.68■□□□□ 0.74
TWNKQ96RR1 PHF2-202ENST00000375376 3045 ntTSL 5 BASIC19.68■□□□□ 0.74
TWNKQ96RR1 ANKS3-202ENST00000446014 2265 ntTSL 5 BASIC19.68■□□□□ 0.74
TWNKQ96RR1 ATRIP-201ENST00000320211 2590 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
TWNKQ96RR1 SEMA3B-202ENST00000418576 1765 ntTSL 2 BASIC19.68■□□□□ 0.74
TWNKQ96RR1 SH3BP2-202ENST00000435136 2318 ntAPPRIS P3 TSL 2 BASIC19.68■□□□□ 0.74
TWNKQ96RR1 AL163051.1-201ENST00000569214 1512 ntBASIC19.68■□□□□ 0.74
TWNKQ96RR1 GGCT-202ENST00000275428 1173 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
TWNKQ96RR1 DNAJC4-201ENST00000321460 1015 ntAPPRIS ALT2 TSL 1 (best) BASIC19.68■□□□□ 0.74
TWNKQ96RR1 ABCD1-202ENST00000370129 1016 ntTSL 2 BASIC19.68■□□□□ 0.74
TWNKQ96RR1 SELENOF-203ENST00000401030 727 ntTSL 2 BASIC19.68■□□□□ 0.74
TWNKQ96RR1 FAM8A6P-201ENST00000407496 1135 ntBASIC19.68■□□□□ 0.74
TWNKQ96RR1 HDAC11-AS1-201ENST00000424112 515 ntTSL 2 BASIC19.68■□□□□ 0.74
TWNKQ96RR1 AC007731.5-201ENST00000429594 644 ntAPPRIS P1 TSL 5 BASIC19.68■□□□□ 0.74
TWNKQ96RR1 ST6GALNAC4P1-201ENST00000435385 499 ntBASIC19.68■□□□□ 0.74
TWNKQ96RR1 RASA4DP-201ENST00000460726 1199 ntBASIC19.68■□□□□ 0.74
TWNKQ96RR1 AC019068.1-202ENST00000483218 768 ntTSL 3 BASIC19.68■□□□□ 0.74
TWNKQ96RR1 LTBR-211ENST00000543190 785 ntTSL 3 BASIC19.68■□□□□ 0.74
TWNKQ96RR1 AC021739.3-201ENST00000557908 855 ntTSL 2 BASIC19.68■□□□□ 0.74
TWNKQ96RR1 AL049597.2-201ENST00000565575 961 ntBASIC19.68■□□□□ 0.74
TWNKQ96RR1 AC239803.1-201ENST00000594189 1278 ntTSL 5 BASIC19.68■□□□□ 0.74
TWNKQ96RR1 USP39-201ENST00000323701 2177 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
TWNKQ96RR1 FKRP-202ENST00000391909 2801 ntAPPRIS P1 TSL 2 BASIC19.68■□□□□ 0.74
TWNKQ96RR1 COPS7A-204ENST00000534947 2034 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
TWNKQ96RR1 CBX1-202ENST00000393408 2422 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
TWNKQ96RR1 HCN2-201ENST00000251287 3408 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
TWNKQ96RR1 PTTG1IP-204ENST00000445724 2497 ntTSL 2 BASIC19.67■□□□□ 0.74
TWNKQ96RR1 C6orf118-201ENST00000230301 1812 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
TWNKQ96RR1 ARHGAP5-203ENST00000396582 5786 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
TWNKQ96RR1 MAP3K7CL-206ENST00000399928 1904 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
TWNKQ96RR1 EHBP1-209ENST00000431489 5076 ntAPPRIS ALT2 TSL 1 (best) BASIC19.67■□□□□ 0.74
TWNKQ96RR1 AL360181.3-201ENST00000468317 1605 ntAPPRIS P1 TSL 5 BASIC19.67■□□□□ 0.74
TWNKQ96RR1 ENTPD6-201ENST00000354989 2708 ntAPPRIS ALT2 TSL 1 (best) BASIC19.67■□□□□ 0.74
TWNKQ96RR1 AC004540.1-203ENST00000421862 907 ntTSL 5 BASIC19.67■□□□□ 0.74
TWNKQ96RR1 ELOVL2-AS1-202ENST00000456616 903 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
TWNKQ96RR1 AC027682.4-201ENST00000605277 798 ntTSL 5 BASIC19.67■□□□□ 0.74
TWNKQ96RR1 AC079602.3-201ENST00000623931 403 ntBASIC19.67■□□□□ 0.74
TWNKQ96RR1 DFFB-212ENST00000625756 649 ntTSL 5 BASIC19.67■□□□□ 0.74
TWNKQ96RR1 ANKRD36-207ENST00000639293 1168 ntAPPRIS ALT2 TSL 5 BASIC19.67■□□□□ 0.74
TWNKQ96RR1 GFI1-201ENST00000294702 2784 ntAPPRIS P1 TSL 2 BASIC19.67■□□□□ 0.74
TWNKQ96RR1 RETREG2-203ENST00000430297 4618 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
TWNKQ96RR1 WFDC1-203ENST00000568638 1319 ntAPPRIS P1 TSL 2 BASIC19.67■□□□□ 0.74
TWNKQ96RR1 SLC22A17-204ENST00000397267 2455 ntAPPRIS P4 TSL 5 BASIC19.67■□□□□ 0.74
TWNKQ96RR1 MROH1-202ENST00000423230 1712 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
TWNKQ96RR1 ZMYM5-202ENST00000382905 1382 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
TWNKQ96RR1 TRIM63-201ENST00000374272 1770 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
TWNKQ96RR1 AP003356.1-202ENST00000517910 2770 ntTSL 2 BASIC19.66■□□□□ 0.74
TWNKQ96RR1 RGMB-AS1-201ENST00000498871 1903 ntTSL 2 BASIC19.66■□□□□ 0.74
TWNKQ96RR1 HLA-G-205ENST00000428701 1578 ntAPPRIS P2 BASIC19.66■□□□□ 0.74
TWNKQ96RR1 MFSD10-205ENST00000507555 1573 ntTSL 5 BASIC19.66■□□□□ 0.74
TWNKQ96RR1 HTRA3-201ENST00000307358 2541 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
TWNKQ96RR1 SLBP-201ENST00000318386 1635 ntAPPRIS ALT1 TSL 3 BASIC19.66■□□□□ 0.74
TWNKQ96RR1 ARID1B-220ENST00000636930 8246 ntAPPRIS ALT2 TSL 2 BASIC19.66■□□□□ 0.74
TWNKQ96RR1 GTF2H4-202ENST00000376316 1673 ntAPPRIS P1 TSL 5 BASIC19.66■□□□□ 0.74
TWNKQ96RR1 TMEM177-204ENST00000424086 1738 ntAPPRIS P1 TSL 2 BASIC19.66■□□□□ 0.74
TWNKQ96RR1 CYR61-201ENST00000451137 2290 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
TWNKQ96RR1 AP5S1-202ENST00000379567 1791 ntAPPRIS P1 TSL 2 BASIC19.66■□□□□ 0.74
TWNKQ96RR1 GYG2P1-201ENST00000357871 623 ntTSL 3 BASIC19.66■□□□□ 0.74
TWNKQ96RR1 STARP1-201ENST00000397973 869 ntBASIC19.66■□□□□ 0.74
TWNKQ96RR1 AL513320.1-201ENST00000435049 622 ntTSL 3 BASIC19.66■□□□□ 0.74
TWNKQ96RR1 SMIM29-209ENST00000636500 1186 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
TWNKQ96RR1 KRT15-203ENST00000393976 2394 ntAPPRIS P1 TSL 5 BASIC19.66■□□□□ 0.74
TWNKQ96RR1 TMEM109-201ENST00000227525 2413 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
TWNKQ96RR1 NPNT-203ENST00000427316 2481 ntAPPRIS ALT2 TSL 2 BASIC19.66■□□□□ 0.74
TWNKQ96RR1 SNX4-201ENST00000251775 2513 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
TWNKQ96RR1 KBTBD2-201ENST00000304056 3745 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
TWNKQ96RR1 SPAG4-201ENST00000374273 1453 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
TWNKQ96RR1 AC008393.1-201ENST00000499601 1454 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
TWNKQ96RR1 BAIAP2-204ENST00000428708 2095 ntAPPRIS ALT2 TSL 1 (best) BASIC19.66■□□□□ 0.74
TWNKQ96RR1 ATP9A-202ENST00000338821 8106 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
TWNKQ96RR1 GOLPH3-201ENST00000265070 2721 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
Retrieved 100 of 98,524 protein–RNA pairs in 59.4 ms