Protein–RNA interactions for Protein: Q96RK1

CITED4, Cbp/p300-interacting transactivator 4, humanhuman

Predictions only

Length 184 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CITED4Q96RK1 HMCES-203ENST00000417226 1490 ntTSL 1 (best) BASIC15.92■□□□□ 0.14
CITED4Q96RK1 ZNF767P-201ENST00000463567 3520 ntTSL 2 BASIC15.92■□□□□ 0.14
CITED4Q96RK1 EPHA8-201ENST00000166244 4943 ntAPPRIS P1 TSL 2 BASIC15.92■□□□□ 0.14
CITED4Q96RK1 SDR39U1-208ENST00000554698 1364 ntTSL 1 (best) BASIC15.92■□□□□ 0.14
CITED4Q96RK1 GSPT1-202ENST00000434724 7105 ntAPPRIS P4 TSL 1 (best) BASIC15.92■□□□□ 0.14
CITED4Q96RK1 ARSA-201ENST00000216124 2050 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
CITED4Q96RK1 CDK4-201ENST00000257904 2076 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
CITED4Q96RK1 ABHD17AP1-201ENST00000358206 933 ntBASIC15.92■□□□□ 0.14
CITED4Q96RK1 LRRC3C-201ENST00000377924 891 ntAPPRIS P1 TSL 3 BASIC15.92■□□□□ 0.14
CITED4Q96RK1 IZUMO4-203ENST00000395307 944 ntAPPRIS P3 TSL 1 (best) BASIC15.92■□□□□ 0.14
CITED4Q96RK1 POLE4-205ENST00000483063 1248 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
CITED4Q96RK1 PPP1R14BP3-201ENST00000509033 445 ntBASIC15.92■□□□□ 0.14
CITED4Q96RK1 DBI-210ENST00000542275 757 ntTSL 5 BASIC15.92■□□□□ 0.14
CITED4Q96RK1 AL034346.1-201ENST00000568244 1277 ntBASIC15.92■□□□□ 0.14
CITED4Q96RK1 GABARAPL2-205ENST00000568455 646 ntTSL 3 BASIC15.92■□□□□ 0.14
CITED4Q96RK1 LINC01901-201ENST00000585822 1115 ntTSL 1 (best) BASIC15.92■□□□□ 0.14
CITED4Q96RK1 AC104771.1-201ENST00000603335 964 ntBASIC15.92■□□□□ 0.14
CITED4Q96RK1 BID-214ENST00000617586 542 ntTSL 5 BASIC15.92■□□□□ 0.14
CITED4Q96RK1 TP53I3-202ENST00000335934 1635 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
CITED4Q96RK1 HARBI1-201ENST00000326737 1967 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
CITED4Q96RK1 MLEC-201ENST00000228506 6626 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
CITED4Q96RK1 CDK11B-204ENST00000407249 2677 ntTSL 1 (best) BASIC15.92■□□□□ 0.14
CITED4Q96RK1 AC004835.1-201ENST00000428222 2907 ntTSL 5 BASIC15.92■□□□□ 0.14
CITED4Q96RK1 CAMTA1-201ENST00000303635 8444 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
CITED4Q96RK1 MAP3K3-202ENST00000361733 3529 ntAPPRIS P3 TSL 1 (best) BASIC15.92■□□□□ 0.14
CITED4Q96RK1 CES3-203ENST00000543856 3178 ntTSL 2 BASIC15.92■□□□□ 0.14
CITED4Q96RK1 SPNS1-202ENST00000323081 2102 ntTSL 2 BASIC15.92■□□□□ 0.14
CITED4Q96RK1 AC138649.1-201ENST00000619611 1449 ntTSL 1 (best) BASIC15.92■□□□□ 0.14
CITED4Q96RK1 SLC39A5-201ENST00000266980 2031 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
CITED4Q96RK1 MYB-201ENST00000316528 3571 ntTSL 5 BASIC15.92■□□□□ 0.14
CITED4Q96RK1 MYB-241ENST00000616088 3573 ntTSL 5 BASIC15.92■□□□□ 0.14
CITED4Q96RK1 EXOC3-AS1-202ENST00000623673 1663 ntBASIC15.92■□□□□ 0.14
CITED4Q96RK1 PBX1-215ENST00000559240 2866 ntTSL 5 BASIC15.92■□□□□ 0.14
CITED4Q96RK1 GCSH-208ENST00000639169 2537 ntTSL 2 BASIC15.92■□□□□ 0.14
CITED4Q96RK1 SLC3A2-201ENST00000338663 1904 ntTSL 1 (best) BASIC15.92■□□□□ 0.14
CITED4Q96RK1 SEMA3B-204ENST00000433753 2755 ntAPPRIS ALT1 TSL 1 (best) BASIC15.92■□□□□ 0.14
CITED4Q96RK1 MINPP1-201ENST00000371994 2183 ntTSL 1 (best) BASIC15.92■□□□□ 0.14
CITED4Q96RK1 SH3GL1-206ENST00000598564 2194 ntTSL 2 BASIC15.92■□□□□ 0.14
CITED4Q96RK1 HRASLS5-206ENST00000540857 3032 ntAPPRIS ALT2 TSL 1 (best) BASIC15.92■□□□□ 0.14
CITED4Q96RK1 NDUFA10-203ENST00000404554 1557 ntTSL 5 BASIC15.92■□□□□ 0.14
CITED4Q96RK1 ARHGEF28-211ENST00000512883 2936 ntTSL 2 BASIC15.91■□□□□ 0.14
CITED4Q96RK1 ZGLP1-202ENST00000403903 2303 ntAPPRIS P2 TSL 1 (best) BASIC15.91■□□□□ 0.14
CITED4Q96RK1 RBFOX1-212ENST00000550418 4775 ntTSL 1 (best) BASIC15.91■□□□□ 0.14
CITED4Q96RK1 SLC47A1-202ENST00000395585 1998 ntTSL 1 (best) BASIC15.91■□□□□ 0.14
CITED4Q96RK1 WDR25-202ENST00000402312 1969 ntAPPRIS P1 TSL 2 BASIC15.91■□□□□ 0.14
CITED4Q96RK1 TRABD2A-203ENST00000409520 1975 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
CITED4Q96RK1 PCDHA1-201ENST00000378133 2726 ntBASIC15.91■□□□□ 0.14
CITED4Q96RK1 AES-201ENST00000221561 1884 ntTSL 1 (best) BASIC15.91■□□□□ 0.14
CITED4Q96RK1 CHSY3-201ENST00000305031 3850 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
CITED4Q96RK1 PP7080-201ENST00000342584 1876 ntTSL 1 (best) BASIC15.91■□□□□ 0.14
CITED4Q96RK1 MOB3A-201ENST00000357066 3391 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
CITED4Q96RK1 ATP1B1-202ENST00000367816 2608 ntAPPRIS P1 TSL 5 BASIC15.91■□□□□ 0.14
CITED4Q96RK1 SERPINA4-201ENST00000298841 1784 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
CITED4Q96RK1 BCAM-206ENST00000589651 2686 ntTSL 1 (best) BASIC15.91■□□□□ 0.14
CITED4Q96RK1 JSRP1-201ENST00000300961 1138 ntAPPRIS P1 TSL 2 BASIC15.91■□□□□ 0.14
CITED4Q96RK1 STX7-201ENST00000367937 1090 ntTSL 5 BASIC15.91■□□□□ 0.14
CITED4Q96RK1 IL15RA-207ENST00000397250 584 ntTSL 2 BASIC15.91■□□□□ 0.14
CITED4Q96RK1 LTC4S-202ENST00000401985 486 ntTSL 3 BASIC15.91■□□□□ 0.14
CITED4Q96RK1 ANKRD63-201ENST00000434396 1143 ntAPPRIS P1 BASIC15.91■□□□□ 0.14
CITED4Q96RK1 AC006970.2-201ENST00000450065 779 ntBASIC15.91■□□□□ 0.14
CITED4Q96RK1 IL15RA-215ENST00000528354 1037 ntTSL 2 BASIC15.91■□□□□ 0.14
CITED4Q96RK1 AP001363.2-201ENST00000538101 391 ntTSL 3 BASIC15.91■□□□□ 0.14
CITED4Q96RK1 AP003071.3-201ENST00000562506 366 ntTSL 3 BASIC15.91■□□□□ 0.14
CITED4Q96RK1 TRAPPC6A-205ENST00000592647 514 ntTSL 2 BASIC15.91■□□□□ 0.14
CITED4Q96RK1 IL15RA-220ENST00000620345 1115 ntAPPRIS ALT2 TSL 1 (best) BASIC15.91■□□□□ 0.14
CITED4Q96RK1 SLC35A2-211ENST00000634461 533 ntTSL 4 BASIC15.91■□□□□ 0.14
CITED4Q96RK1 EEF1A1-203ENST00000331523 1923 ntAPPRIS P1 TSL 5 BASIC15.91■□□□□ 0.14
CITED4Q96RK1 PTPN21-208ENST00000556564 6166 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
CITED4Q96RK1 ITGB2-207ENST00000397854 2592 ntTSL 1 (best) BASIC15.91■□□□□ 0.14
CITED4Q96RK1 ELN-221ENST00000445912 2583 ntAPPRIS ALT2 TSL 2 BASIC15.91■□□□□ 0.14
CITED4Q96RK1 LRRC3B-201ENST00000396641 1696 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
CITED4Q96RK1 CD7-206ENST00000583376 1659 ntTSL 1 (best) BASIC15.91■□□□□ 0.14
CITED4Q96RK1 ZFAND6-224ENST00000618205 1659 ntAPPRIS P1 TSL 5 BASIC15.91■□□□□ 0.14
CITED4Q96RK1 JAK3-201ENST00000458235 5432 ntAPPRIS P2 TSL 5 BASIC15.91■□□□□ 0.14
CITED4Q96RK1 AL021453.1-201ENST00000333487 2989 ntTSL 2 BASIC15.91■□□□□ 0.14
CITED4Q96RK1 AC009237.3-201ENST00000393279 1427 ntBASIC15.91■□□□□ 0.14
CITED4Q96RK1 SPINT1-202ENST00000562057 2456 ntAPPRIS ALT2 TSL 1 (best) BASIC15.91■□□□□ 0.14
CITED4Q96RK1 PRKRA-201ENST00000325748 1826 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
CITED4Q96RK1 FMR1-AS1-202ENST00000596112 1845 ntTSL 1 (best) BASIC15.91■□□□□ 0.14
CITED4Q96RK1 ABR-203ENST00000536794 2213 ntTSL 2 BASIC15.91■□□□□ 0.14
CITED4Q96RK1 SLC47A1-209ENST00000575023 2224 ntTSL 1 (best) BASIC15.91■□□□□ 0.14
CITED4Q96RK1 TDRKH-207ENST00000458431 2768 ntAPPRIS P2 TSL 1 (best) BASIC15.91■□□□□ 0.14
CITED4Q96RK1 KIRREL1-202ENST00000360089 3304 ntTSL 1 (best) BASIC15.91■□□□□ 0.14
CITED4Q96RK1 TMCO6-203ENST00000394671 1887 ntAPPRIS P1 TSL 2 BASIC15.91■□□□□ 0.14
CITED4Q96RK1 SLCO5A1-201ENST00000260126 9076 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
CITED4Q96RK1 CNP-201ENST00000393888 2583 ntTSL 1 (best) BASIC15.9■□□□□ 0.14
CITED4Q96RK1 ATXN2-219ENST00000550104 4648 ntAPPRIS P3 TSL 1 (best) BASIC15.9■□□□□ 0.14
CITED4Q96RK1 CD34-202ENST00000356522 2874 ntTSL 1 (best) BASIC15.9■□□□□ 0.14
CITED4Q96RK1 HTATSF1-204ENST00000535601 3019 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
CITED4Q96RK1 SPRED3-202ENST00000586301 1366 ntAPPRIS P1 TSL 5 BASIC15.9■□□□□ 0.14
CITED4Q96RK1 MRAS-202ENST00000423968 1803 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
CITED4Q96RK1 ELFN2-208ENST00000430883 1970 ntTSL 2 BASIC15.9■□□□□ 0.14
CITED4Q96RK1 PGR-209ENST00000617858 2816 ntTSL 5 BASIC15.9■□□□□ 0.14
CITED4Q96RK1 UCHL1-201ENST00000284440 1172 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
CITED4Q96RK1 COX20-201ENST00000366528 568 ntTSL 2 BASIC15.9■□□□□ 0.14
CITED4Q96RK1 BCKDHB-203ENST00000369760 743 ntTSL 3 BASIC15.9■□□□□ 0.14
CITED4Q96RK1 METTL26-203ENST00000397664 604 ntTSL 2 BASIC15.9■□□□□ 0.14
CITED4Q96RK1 AC092171.1-201ENST00000455866 753 ntTSL 2 BASIC15.9■□□□□ 0.14
CITED4Q96RK1 AC092468.1-201ENST00000491321 562 ntTSL 4 BASIC15.9■□□□□ 0.14
CITED4Q96RK1 UCHL1-210ENST00000512788 785 ntTSL 3 BASIC15.9■□□□□ 0.14
Retrieved 100 of 98,524 protein–RNA pairs in 25.4 ms