Protein–RNA interactions for Protein: Q96PZ7

CSMD1, CUB and sushi domain-containing protein 1, humanhuman

Predictions only

Length 3,565 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CSMD1Q96PZ7 TMEM132A-202ENST00000453848 3346 ntAPPRIS ALT2 TSL 1 (best) BASIC15.79■□□□□ 0.12
CSMD1Q96PZ7 PTPN11-202ENST00000392597 1876 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
CSMD1Q96PZ7 AC020661.1-201ENST00000503052 1584 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
CSMD1Q96PZ7 ASGR1-202ENST00000380920 944 ntTSL 3 BASIC15.79■□□□□ 0.12
CSMD1Q96PZ7 ARRB2-203ENST00000381488 1236 ntTSL 2 BASIC15.79■□□□□ 0.12
CSMD1Q96PZ7 IRF8-202ENST00000562492 946 ntTSL 3 BASIC15.79■□□□□ 0.12
CSMD1Q96PZ7 AL591684.3-201ENST00000605187 298 ntBASIC15.79■□□□□ 0.12
CSMD1Q96PZ7 LINC00634-201ENST00000381348 1510 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
CSMD1Q96PZ7 PIGQ-206ENST00000422307 2052 ntTSL 3 BASIC15.79■□□□□ 0.12
CSMD1Q96PZ7 NKX6-1-201ENST00000295886 2628 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
CSMD1Q96PZ7 LRRC1-202ENST00000370888 3180 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
CSMD1Q96PZ7 BCKDK-202ENST00000287507 1907 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
CSMD1Q96PZ7 TMEM44-203ENST00000381975 2197 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
CSMD1Q96PZ7 LUC7L-201ENST00000293872 1456 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
CSMD1Q96PZ7 ICAM4-202ENST00000380770 1211 ntAPPRIS P3 TSL 1 (best) BASIC15.79■□□□□ 0.12
CSMD1Q96PZ7 AC004832.2-201ENST00000426397 482 ntBASIC15.79■□□□□ 0.12
CSMD1Q96PZ7 AC132008.2-207ENST00000454517 770 ntBASIC15.79■□□□□ 0.12
CSMD1Q96PZ7 LINC00668-203ENST00000579012 605 ntTSL 3 BASIC15.79■□□□□ 0.12
CSMD1Q96PZ7 AP001269.4-201ENST00000609611 512 ntBASIC15.79■□□□□ 0.12
CSMD1Q96PZ7 AL355877.3-201ENST00000622820 899 ntBASIC15.79■□□□□ 0.12
CSMD1Q96PZ7 RAB34-226ENST00000636772 1180 ntTSL 5 BASIC15.79■□□□□ 0.12
CSMD1Q96PZ7 MARK2-201ENST00000350490 2903 ntAPPRIS ALT2 TSL 1 (best) BASIC15.79■□□□□ 0.12
CSMD1Q96PZ7 C17orf67-201ENST00000397861 2013 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
CSMD1Q96PZ7 SPON2-203ENST00000431380 1802 ntAPPRIS P1 TSL 5 BASIC15.79■□□□□ 0.12
CSMD1Q96PZ7 ACAA1-201ENST00000301810 1540 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
CSMD1Q96PZ7 FCN2-201ENST00000291744 1057 ntAPPRIS P2 TSL 1 (best) BASIC15.79■□□□□ 0.12
CSMD1Q96PZ7 MRPL20-203ENST00000482352 1049 ntTSL 2 BASIC15.79■□□□□ 0.12
CSMD1Q96PZ7 MYD88-211ENST00000495303 976 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
CSMD1Q96PZ7 AC025062.2-201ENST00000605477 670 ntBASIC15.79■□□□□ 0.12
CSMD1Q96PZ7 TOR1A-201ENST00000351698 2076 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
CSMD1Q96PZ7 NAA60-235ENST00000576916 1567 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
CSMD1Q96PZ7 AC104417.2-201ENST00000562989 1793 ntBASIC15.78■□□□□ 0.12
CSMD1Q96PZ7 TAF7-201ENST00000313368 2334 ntAPPRIS P1 BASIC15.78■□□□□ 0.12
CSMD1Q96PZ7 PTGES2-201ENST00000277462 1614 ntTSL 2 BASIC15.78■□□□□ 0.12
CSMD1Q96PZ7 TRPV6-209ENST00000638686 2298 ntAPPRIS P2 TSL 1 (best) BASIC15.78■□□□□ 0.12
CSMD1Q96PZ7 MTFR1L-203ENST00000374303 2004 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
CSMD1Q96PZ7 TNNT1-201ENST00000291901 967 ntAPPRIS ALT2 TSL 1 (best) BASIC15.78■□□□□ 0.12
CSMD1Q96PZ7 ANKRD37-201ENST00000335174 1141 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
CSMD1Q96PZ7 FGFR3P6-201ENST00000457012 610 ntBASIC15.78■□□□□ 0.12
CSMD1Q96PZ7 AC069287.3-201ENST00000527297 589 ntTSL 5 BASIC15.78■□□□□ 0.12
CSMD1Q96PZ7 AC133919.2-201ENST00000565965 589 ntTSL 4 BASIC15.78■□□□□ 0.12
CSMD1Q96PZ7 IGHV3-41-201ENST00000613121 348 ntBASIC15.78■□□□□ 0.12
CSMD1Q96PZ7 MALAT1-215ENST00000619449 794 ntTSL 3 BASIC15.78■□□□□ 0.12
CSMD1Q96PZ7 AC005258.1-201ENST00000621615 1268 ntAPPRIS P1 TSL 2 BASIC15.78■□□□□ 0.12
CSMD1Q96PZ7 AC124864.1-201ENST00000623408 392 ntBASIC15.78■□□□□ 0.12
CSMD1Q96PZ7 ANKMY2-206ENST00000628652 1270 ntTSL 5 BASIC15.78■□□□□ 0.12
CSMD1Q96PZ7 MAG-201ENST00000361922 2426 ntAPPRIS ALT2 TSL 1 (best) BASIC15.78■□□□□ 0.12
CSMD1Q96PZ7 AC007952.6-201ENST00000573168 2673 ntBASIC15.78■□□□□ 0.12
CSMD1Q96PZ7 AC003957.1-201ENST00000625108 2673 ntBASIC15.78■□□□□ 0.12
CSMD1Q96PZ7 MAPK8IP1-201ENST00000241014 3050 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
CSMD1Q96PZ7 NTN5-201ENST00000270235 1836 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
CSMD1Q96PZ7 FTMT-201ENST00000321339 879 ntAPPRIS P1 BASIC15.78■□□□□ 0.12
CSMD1Q96PZ7 CKLF-203ENST00000351137 508 ntAPPRIS ALT2 TSL 1 (best) BASIC15.78■□□□□ 0.12
CSMD1Q96PZ7 AC007274.1-201ENST00000439805 662 ntBASIC15.78■□□□□ 0.12
CSMD1Q96PZ7 SWI5-205ENST00000495313 466 ntAPPRIS ALT2 TSL 3 BASIC15.78■□□□□ 0.12
CSMD1Q96PZ7 CAND2-206ENST00000626378 333 ntTSL 5 BASIC15.78■□□□□ 0.12
CSMD1Q96PZ7 KCNMA1-252ENST00000639120 2308 ntTSL 5 BASIC15.78■□□□□ 0.12
CSMD1Q96PZ7 TRMT6-202ENST00000453074 2239 ntTSL 2 BASIC15.78■□□□□ 0.12
CSMD1Q96PZ7 TEX264-215ENST00000611400 1488 ntAPPRIS P3 TSL 5 BASIC15.77■□□□□ 0.12
CSMD1Q96PZ7 CDK2AP2-201ENST00000301488 1378 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
CSMD1Q96PZ7 WDR53-203ENST00000429115 683 ntTSL 2 BASIC15.77■□□□□ 0.12
CSMD1Q96PZ7 BCRP1-201ENST00000444246 691 ntBASIC15.77■□□□□ 0.12
CSMD1Q96PZ7 TSTD3-201ENST00000452647 962 ntAPPRIS P2 TSL 2 BASIC15.77■□□□□ 0.12
CSMD1Q96PZ7 PPP1R14A-203ENST00000587515 607 ntTSL 2 BASIC15.77■□□□□ 0.12
CSMD1Q96PZ7 AC008608.2-201ENST00000606089 416 ntBASIC15.77■□□□□ 0.12
CSMD1Q96PZ7 KCNK17-202ENST00000453413 1706 ntAPPRIS ALT2 TSL 5 BASIC15.77■□□□□ 0.12
CSMD1Q96PZ7 RUNX3-202ENST00000338888 2629 ntAPPRIS ALT2 TSL 1 (best) BASIC15.77■□□□□ 0.12
CSMD1Q96PZ7 PCCB-216ENST00000483687 1727 ntTSL 3 BASIC15.77■□□□□ 0.12
CSMD1Q96PZ7 AC005329.3-201ENST00000626781 1366 ntTSL 5 BASIC15.77■□□□□ 0.12
CSMD1Q96PZ7 STX8-201ENST00000306357 1246 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
CSMD1Q96PZ7 AC093714.2-201ENST00000489626 763 ntTSL 3 BASIC15.77■□□□□ 0.12
CSMD1Q96PZ7 CHMP2B-205ENST00000494980 1175 ntTSL 3 BASIC15.77■□□□□ 0.12
CSMD1Q96PZ7 CYB561D1-208ENST00000528785 1271 ntAPPRIS ALT1 TSL 5 BASIC15.77■□□□□ 0.12
CSMD1Q96PZ7 CYB561D1-209ENST00000533024 913 ntTSL 2 BASIC15.77■□□□□ 0.12
CSMD1Q96PZ7 PDCD6-214ENST00000628729 1073 ntTSL 5 BASIC15.77■□□□□ 0.12
CSMD1Q96PZ7 PPP1R12C-202ENST00000435544 2363 ntTSL 2 BASIC15.77■□□□□ 0.12
CSMD1Q96PZ7 TH-202ENST00000333684 1535 ntTSL 1 (best) BASIC15.77■□□□□ 0.12
CSMD1Q96PZ7 GPR35-202ENST00000403859 2032 ntAPPRIS P3 TSL 2 BASIC15.77■□□□□ 0.12
CSMD1Q96PZ7 EFHD2-201ENST00000375980 2419 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
CSMD1Q96PZ7 KIAA0895L-206ENST00000563902 2233 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.11
CSMD1Q96PZ7 DDX55-205ENST00000538744 1735 ntTSL 5 BASIC15.77■□□□□ 0.11
CSMD1Q96PZ7 GPR162-201ENST00000311268 2768 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.11
CSMD1Q96PZ7 PIGU-202ENST00000374820 1248 ntAPPRIS ALT2 TSL 1 (best) BASIC15.77■□□□□ 0.11
CSMD1Q96PZ7 AC097532.1-201ENST00000440802 322 ntTSL 2 BASIC15.77■□□□□ 0.11
CSMD1Q96PZ7 AC025183.1-201ENST00000506335 425 ntTSL 4 BASIC15.77■□□□□ 0.11
CSMD1Q96PZ7 NAA60-217ENST00000572942 1089 ntTSL 2 BASIC15.77■□□□□ 0.11
CSMD1Q96PZ7 PRELID3B-201ENST00000355937 2626 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.11
CSMD1Q96PZ7 GOLGA6L5P-202ENST00000515341 1828 ntBASIC15.77■□□□□ 0.11
CSMD1Q96PZ7 BACE2-202ENST00000330333 2993 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.11
CSMD1Q96PZ7 LRRC42-203ENST00000371370 2037 ntAPPRIS P1 TSL 2 BASIC15.77■□□□□ 0.11
CSMD1Q96PZ7 SDHAP1-207ENST00000440850 2000 ntBASIC15.77■□□□□ 0.11
CSMD1Q96PZ7 ZNF598-204ENST00000563630 3371 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.11
CSMD1Q96PZ7 CD244-202ENST00000368033 1360 ntAPPRIS ALT2 TSL 1 (best) BASIC15.76■□□□□ 0.11
CSMD1Q96PZ7 LAYN-202ENST00000375615 1836 ntAPPRIS ALT2 TSL 1 (best) BASIC15.76■□□□□ 0.11
CSMD1Q96PZ7 SLC46A3-202ENST00000380814 2121 ntAPPRIS ALT1 TSL 1 (best) BASIC15.76■□□□□ 0.11
CSMD1Q96PZ7 AC114490.1-202ENST00000311990 1887 ntTSL 1 (best) BASIC15.76■□□□□ 0.11
CSMD1Q96PZ7 ZNF7-201ENST00000325217 592 ntTSL 4 BASIC15.76■□□□□ 0.11
CSMD1Q96PZ7 PFDN6-201ENST00000374606 740 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
CSMD1Q96PZ7 TOX2-205ENST00000423191 1709 ntTSL 2 BASIC15.76■□□□□ 0.11
CSMD1Q96PZ7 AP001625.2-201ENST00000442605 575 ntTSL 2 BASIC15.76■□□□□ 0.11
Retrieved 100 of 98,524 protein–RNA pairs in 18.3 ms