Protein–RNA interactions for Protein: Q96PG1

MS4A4E, Putative membrane-spanning 4-domains subfamily A member 4E, humanhuman

Predictions only

Length 132 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MS4A4EQ96PG1 TSTD1-202ENST00000368023 574 ntAPPRIS ALT2 TSL 2 BASIC17.34■□□□□ 0.37
MS4A4EQ96PG1 AGO4-201ENST00000373210 7116 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
MS4A4EQ96PG1 CCDC107-202ENST00000378406 1016 ntAPPRIS ALT2 TSL 2 BASIC17.34■□□□□ 0.37
MS4A4EQ96PG1 ARID3C-201ENST00000378909 1411 ntAPPRIS P1 TSL 2 BASIC17.34■□□□□ 0.37
MS4A4EQ96PG1 RENBP-202ENST00000393700 1388 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
MS4A4EQ96PG1 SPDYE2B-202ENST00000455020 1219 ntAPPRIS ALT2 TSL 1 (best) BASIC17.34■□□□□ 0.37
MS4A4EQ96PG1 AC093827.2-201ENST00000512654 315 ntBASIC17.34■□□□□ 0.37
MS4A4EQ96PG1 AC136628.4-201ENST00000520758 535 ntTSL 2 BASIC17.34■□□□□ 0.37
MS4A4EQ96PG1 AP006621.4-201ENST00000527021 532 ntTSL 5 BASIC17.34■□□□□ 0.37
MS4A4EQ96PG1 BX088651.1-201ENST00000540551 451 ntBASIC17.34■□□□□ 0.37
MS4A4EQ96PG1 P2RX2-208ENST00000542301 1881 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
MS4A4EQ96PG1 ZNF446-203ENST00000594369 2238 ntAPPRIS P2 TSL 1 (best) BASIC17.34■□□□□ 0.37
MS4A4EQ96PG1 CROCCP2-205ENST00000639481 1296 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
MS4A4EQ96PG1 ZNF385B-204ENST00000410066 3288 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
MS4A4EQ96PG1 ARHGEF28-204ENST00000437974 5792 ntAPPRIS P3 TSL 1 (best) BASIC17.34■□□□□ 0.37
MS4A4EQ96PG1 RGS9BP-201ENST00000334176 2894 ntAPPRIS P1 BASIC17.34■□□□□ 0.37
MS4A4EQ96PG1 GRAMD2B-219ENST00000544396 2822 ntTSL 2 BASIC17.34■□□□□ 0.37
MS4A4EQ96PG1 KCTD15-202ENST00000430256 2555 ntAPPRIS P1 TSL 2 BASIC17.34■□□□□ 0.37
MS4A4EQ96PG1 UBP1-202ENST00000283629 4148 ntAPPRIS P3 TSL 1 (best) BASIC17.33■□□□□ 0.37
MS4A4EQ96PG1 C6orf118-201ENST00000230301 1812 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
MS4A4EQ96PG1 IRF7-202ENST00000348655 1801 ntAPPRIS ALT2 TSL 1 (best) BASIC17.33■□□□□ 0.37
MS4A4EQ96PG1 BCL2-203ENST00000589955 5011 ntBASIC17.33■□□□□ 0.37
MS4A4EQ96PG1 CORO6-212ENST00000584969 1416 ntAPPRIS ALT1 TSL 5 BASIC17.33■□□□□ 0.36
MS4A4EQ96PG1 PLA2G2F-201ENST00000375102 2723 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
MS4A4EQ96PG1 P3H1-204ENST00000397054 2705 ntAPPRIS ALT2 TSL 1 (best) BASIC17.33■□□□□ 0.36
MS4A4EQ96PG1 IFFO1-212ENST00000619571 2724 ntTSL 2 BASIC17.33■□□□□ 0.36
MS4A4EQ96PG1 CDHR4-201ENST00000343366 1188 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
MS4A4EQ96PG1 PSMD9-208ENST00000542602 516 ntTSL 3 BASIC17.33■□□□□ 0.36
MS4A4EQ96PG1 FFAR4-203ENST00000604414 1142 ntTSL 3 BASIC17.33■□□□□ 0.36
MS4A4EQ96PG1 CCDC50-202ENST00000392456 2454 ntAPPRIS P4 TSL 1 (best) BASIC17.33■□□□□ 0.36
MS4A4EQ96PG1 PTTG1IP-204ENST00000445724 2497 ntTSL 2 BASIC17.33■□□□□ 0.36
MS4A4EQ96PG1 TAF6-211ENST00000453269 2464 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
MS4A4EQ96PG1 UMOD-202ENST00000396134 2408 ntAPPRIS ALT2 TSL 2 BASIC17.33■□□□□ 0.36
MS4A4EQ96PG1 AC135050.7-201ENST00000624508 2218 ntBASIC17.33■□□□□ 0.36
MS4A4EQ96PG1 CAMKK2-207ENST00000404169 2116 ntAPPRIS P4 TSL 1 (best) BASIC17.33■□□□□ 0.36
MS4A4EQ96PG1 HOXC11-201ENST00000243082 2039 ntTSL 3 BASIC17.33■□□□□ 0.36
MS4A4EQ96PG1 CARHSP1-219ENST00000618335 2972 ntAPPRIS P1 TSL 4 BASIC17.33■□□□□ 0.36
MS4A4EQ96PG1 NDN-201ENST00000331837 1931 ntAPPRIS P1 BASIC17.33■□□□□ 0.36
MS4A4EQ96PG1 SLCO4A1-201ENST00000217159 2776 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
MS4A4EQ96PG1 LUC7L2-210ENST00000619796 2783 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
MS4A4EQ96PG1 ETS1-208ENST00000535549 4594 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
MS4A4EQ96PG1 AATK-203ENST00000417379 5081 ntAPPRIS ALT2 TSL 1 (best) BASIC17.32■□□□□ 0.36
MS4A4EQ96PG1 SSC5D-201ENST00000389623 4845 ntAPPRIS P3 TSL 1 (best) BASIC17.32■□□□□ 0.36
MS4A4EQ96PG1 PLEKHG5-212ENST00000537245 4794 ntAPPRIS ALT2 TSL 2 BASIC17.32■□□□□ 0.36
MS4A4EQ96PG1 ZBTB4-201ENST00000311403 5956 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
MS4A4EQ96PG1 ZIC1-201ENST00000282928 5241 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
MS4A4EQ96PG1 DNLZ-202ENST00000371739 2934 ntTSL 5 BASIC17.32■□□□□ 0.36
MS4A4EQ96PG1 DMRT3-201ENST00000190165 2183 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
MS4A4EQ96PG1 XYLT2-203ENST00000507602 2107 ntTSL 2 BASIC17.32■□□□□ 0.36
MS4A4EQ96PG1 ZNF74-203ENST00000403682 2789 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
MS4A4EQ96PG1 HCK-202ENST00000375852 2082 ntAPPRIS ALT2 TSL 1 (best) BASIC17.32■□□□□ 0.36
MS4A4EQ96PG1 PPFIA1-202ENST00000389547 4133 ntAPPRIS ALT1 TSL 1 (best) BASIC17.32■□□□□ 0.36
MS4A4EQ96PG1 DNM1-206ENST00000475805 2710 ntAPPRIS ALT1 TSL 2 BASIC17.32■□□□□ 0.36
MS4A4EQ96PG1 FAM49B-214ENST00000519540 2021 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
MS4A4EQ96PG1 ORC5-201ENST00000297431 1958 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
MS4A4EQ96PG1 SCRIB-201ENST00000320476 5143 ntAPPRIS ALT2 TSL 1 (best) BASIC17.32■□□□□ 0.36
MS4A4EQ96PG1 TSPY14P-201ENST00000303979 915 ntBASIC17.32■□□□□ 0.36
MS4A4EQ96PG1 FAM182B-202ENST00000376404 456 ntAPPRIS ALT2 BASIC17.32■□□□□ 0.36
MS4A4EQ96PG1 TNNT3-206ENST00000381579 1042 ntAPPRIS ALT2 TSL 1 (best) BASIC17.32■□□□□ 0.36
MS4A4EQ96PG1 CXADR-204ENST00000400166 1080 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
MS4A4EQ96PG1 AQP12B-201ENST00000407834 1094 ntAPPRIS P2 TSL 1 (best) BASIC17.32■□□□□ 0.36
MS4A4EQ96PG1 AC007663.1-201ENST00000438948 1240 ntBASIC17.32■□□□□ 0.36
MS4A4EQ96PG1 GCFC2-207ENST00000470503 1066 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
MS4A4EQ96PG1 IKBKB-210ENST00000518983 447 ntTSL 2 BASIC17.32■□□□□ 0.36
MS4A4EQ96PG1 HRASLS5-205ENST00000539221 1167 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
MS4A4EQ96PG1 RABAC1-210ENST00000601891 628 ntTSL 3 BASIC17.32■□□□□ 0.36
MS4A4EQ96PG1 SPINK2-206ENST00000618802 608 ntTSL 3 BASIC17.32■□□□□ 0.36
MS4A4EQ96PG1 HERPUD2-201ENST00000311350 2474 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
MS4A4EQ96PG1 MADD-208ENST00000405573 1823 ntTSL 5 BASIC17.32■□□□□ 0.36
MS4A4EQ96PG1 ZNF213-202ENST00000416391 2996 ntAPPRIS P1 TSL 5 BASIC17.32■□□□□ 0.36
MS4A4EQ96PG1 MROH1-202ENST00000423230 1712 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
MS4A4EQ96PG1 AC012615.6-201ENST00000593201 1697 ntTSL 2 BASIC17.32■□□□□ 0.36
MS4A4EQ96PG1 RELL2-202ENST00000444782 2154 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
MS4A4EQ96PG1 TLK2-202ENST00000343388 3227 ntAPPRIS ALT1 TSL 1 (best) BASIC17.32■□□□□ 0.36
MS4A4EQ96PG1 AL162741.1-201ENST00000565563 1558 ntBASIC17.32■□□□□ 0.36
MS4A4EQ96PG1 BICD1-207ENST00000551848 1962 ntBASIC17.31■□□□□ 0.36
MS4A4EQ96PG1 COQ9-210ENST00000567072 1482 ntTSL 3 BASIC17.31■□□□□ 0.36
MS4A4EQ96PG1 COL4A3BP-201ENST00000261415 2262 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
MS4A4EQ96PG1 CYSTM1-201ENST00000261811 1336 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
MS4A4EQ96PG1 PCED1A-201ENST00000356872 1706 ntTSL 2 BASIC17.31■□□□□ 0.36
MS4A4EQ96PG1 FAM110A-203ENST00000381939 1737 ntAPPRIS P1 TSL 3 BASIC17.31■□□□□ 0.36
MS4A4EQ96PG1 PLEKHB2-203ENST00000404460 1167 ntTSL 2 BASIC17.31■□□□□ 0.36
MS4A4EQ96PG1 AC009487.1-202ENST00000437683 402 ntTSL 2 BASIC17.31■□□□□ 0.36
MS4A4EQ96PG1 AL451069.1-201ENST00000455414 634 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
MS4A4EQ96PG1 REPIN1-210ENST00000482680 1029 ntTSL 2 BASIC17.31■□□□□ 0.36
MS4A4EQ96PG1 CHCHD10-202ENST00000484558 1171 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
MS4A4EQ96PG1 TXNRD3-203ENST00000524230 2950 ntAPPRIS ALT2 TSL 1 (best) BASIC17.31■□□□□ 0.36
MS4A4EQ96PG1 EGLN1P1-201ENST00000531623 762 ntBASIC17.31■□□□□ 0.36
MS4A4EQ96PG1 SDR39U1-202ENST00000538105 1041 ntTSL 2 BASIC17.31■□□□□ 0.36
MS4A4EQ96PG1 WWOX-216ENST00000569818 525 ntBASIC17.31■□□□□ 0.36
MS4A4EQ96PG1 RAB11B-AS1-201ENST00000593581 1013 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
MS4A4EQ96PG1 TPSB2-201ENST00000606293 1165 ntAPPRIS ALT2 TSL 1 (best) BASIC17.31■□□□□ 0.36
MS4A4EQ96PG1 AL513523.10-201ENST00000623024 1186 ntAPPRIS P1 TSL 5 BASIC17.31■□□□□ 0.36
MS4A4EQ96PG1 AC010653.2-201ENST00000623505 997 ntBASIC17.31■□□□□ 0.36
MS4A4EQ96PG1 LRP1-204ENST00000553277 1693 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
MS4A4EQ96PG1 QKI-205ENST00000392127 7911 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
MS4A4EQ96PG1 DAG1-219ENST00000538711 5582 ntAPPRIS P1 TSL 5 BASIC17.31■□□□□ 0.36
MS4A4EQ96PG1 USP32-201ENST00000300896 5171 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
MS4A4EQ96PG1 GNAS-AS1-202ENST00000443966 2341 ntTSL 5 BASIC17.31■□□□□ 0.36
MS4A4EQ96PG1 AK1-203ENST00000373176 2266 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Retrieved 100 of 98,524 protein–RNA pairs in 39.3 ms