Protein–RNA interactions for Protein: Q96PB8

LRRC3B, Leucine-rich repeat-containing protein 3B, humanhuman

Predictions only

Length 259 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRRC3BQ96PB8 CTDNEP1-207ENST00000572043 857 ntTSL 3 BASIC18.99■□□□□ 0.63
LRRC3BQ96PB8 MSC-201ENST00000325509 2023 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
LRRC3BQ96PB8 ACBD4-204ENST00000431281 2026 ntTSL 5 BASIC18.99■□□□□ 0.63
LRRC3BQ96PB8 RHOV-201ENST00000220507 1705 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
LRRC3BQ96PB8 MAGEA6-201ENST00000329342 1740 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
LRRC3BQ96PB8 MAGEA3-201ENST00000370278 1724 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
LRRC3BQ96PB8 CPZ-202ENST00000360986 2267 ntAPPRIS ALT2 TSL 1 (best) BASIC18.99■□□□□ 0.63
LRRC3BQ96PB8 AL161938.1-201ENST00000569833 2180 ntBASIC18.99■□□□□ 0.63
LRRC3BQ96PB8 AGER-205ENST00000375069 1538 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
LRRC3BQ96PB8 CD209-210ENST00000601951 1439 ntAPPRIS ALT2 TSL 1 (best) BASIC18.99■□□□□ 0.63
LRRC3BQ96PB8 CD177-203ENST00000618265 2222 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
LRRC3BQ96PB8 SLC2A14-214ENST00000542505 1650 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
LRRC3BQ96PB8 RUVBL2-206ENST00000595090 2009 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
LRRC3BQ96PB8 RMND5B-201ENST00000313386 1929 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
LRRC3BQ96PB8 CMTM1-204ENST00000336328 606 ntAPPRIS ALT2 TSL 1 (best) BASIC18.98■□□□□ 0.63
LRRC3BQ96PB8 AC106795.1-205ENST00000512851 1056 ntBASIC18.98■□□□□ 0.63
LRRC3BQ96PB8 CMTM1-213ENST00000529506 581 ntAPPRIS ALT2 TSL 1 (best) BASIC18.98■□□□□ 0.63
LRRC3BQ96PB8 BARHL1-202ENST00000542090 1197 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
LRRC3BQ96PB8 LAT-211ENST00000566177 786 ntAPPRIS ALT2 TSL 1 (best) BASIC18.98■□□□□ 0.63
LRRC3BQ96PB8 PPP1R1B-208ENST00000580825 1038 ntAPPRIS P1 TSL 5 BASIC18.98■□□□□ 0.63
LRRC3BQ96PB8 H3F3B-206ENST00000587560 551 ntAPPRIS P1 TSL 2 BASIC18.98■□□□□ 0.63
LRRC3BQ96PB8 AC011511.2-201ENST00000592893 918 ntTSL 3 BASIC18.98■□□□□ 0.63
LRRC3BQ96PB8 CALM3-211ENST00000598871 561 ntTSL 4 BASIC18.98■□□□□ 0.63
LRRC3BQ96PB8 AC004263.2-201ENST00000617183 678 ntBASIC18.98■□□□□ 0.63
LRRC3BQ96PB8 ESR2-212ENST00000556275 2695 ntTSL 2 BASIC18.98■□□□□ 0.63
LRRC3BQ96PB8 RCN1-201ENST00000054950 2572 ntAPPRIS P2 TSL 1 (best) BASIC18.98■□□□□ 0.63
LRRC3BQ96PB8 TWIST2-202ENST00000612363 1404 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
LRRC3BQ96PB8 TNFAIP3-207ENST00000614035 1430 ntTSL 5 BASIC18.98■□□□□ 0.63
LRRC3BQ96PB8 SLC16A3-221ENST00000617373 2048 ntAPPRIS P1 TSL 5 BASIC18.98■□□□□ 0.63
LRRC3BQ96PB8 SLC16A3-222ENST00000619321 2015 ntAPPRIS P1 TSL 5 BASIC18.98■□□□□ 0.63
LRRC3BQ96PB8 EIF2B4-210ENST00000493344 1949 ntTSL 5 BASIC18.98■□□□□ 0.63
LRRC3BQ96PB8 HDAC11-221ENST00000522202 1559 ntAPPRIS ALT2 TSL 2 BASIC18.98■□□□□ 0.63
LRRC3BQ96PB8 KMT5B-203ENST00000401547 2666 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
LRRC3BQ96PB8 RBM34-201ENST00000408888 2054 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
LRRC3BQ96PB8 FNDC11-204ENST00000615526 2954 ntAPPRIS P1 BASIC18.97■□□□□ 0.63
LRRC3BQ96PB8 CA9-201ENST00000378357 1618 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
LRRC3BQ96PB8 DGKZ-203ENST00000421244 2862 ntAPPRIS ALT2 TSL 1 (best) BASIC18.97■□□□□ 0.63
LRRC3BQ96PB8 CABLES1-201ENST00000256925 5002 ntAPPRIS P4 TSL 1 (best) BASIC18.97■□□□□ 0.63
LRRC3BQ96PB8 LAPTM4B-204ENST00000619747 2758 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
LRRC3BQ96PB8 MMP28-204ENST00000615136 2033 ntAPPRIS ALT2 TSL 1 (best) BASIC18.97■□□□□ 0.63
LRRC3BQ96PB8 CAPS-201ENST00000452990 1789 ntTSL 5 BASIC18.97■□□□□ 0.63
LRRC3BQ96PB8 CKLF-202ENST00000345436 571 ntAPPRIS ALT2 TSL 1 (best) BASIC18.97■□□□□ 0.63
LRRC3BQ96PB8 SFTPD-201ENST00000372292 1281 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
LRRC3BQ96PB8 IGF2-202ENST00000381392 1005 ntAPPRIS ALT1 TSL 1 (best) BASIC18.97■□□□□ 0.63
LRRC3BQ96PB8 TP53TG1-202ENST00000416560 710 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
LRRC3BQ96PB8 CDV3-207ENST00000508481 661 ntTSL 3 BASIC18.97■□□□□ 0.63
LRRC3BQ96PB8 RCHY1-208ENST00000512706 1011 ntTSL 3 BASIC18.97■□□□□ 0.63
LRRC3BQ96PB8 CCDC61-201ENST00000536603 1282 ntAPPRIS ALT2 TSL 1 (best) BASIC18.97■□□□□ 0.63
LRRC3BQ96PB8 AC099518.3-201ENST00000564808 809 ntAPPRIS P5 TSL 4 BASIC18.97■□□□□ 0.63
LRRC3BQ96PB8 LINC01711-201ENST00000598340 967 ntBASIC18.97■□□□□ 0.63
LRRC3BQ96PB8 AL121912.1-201ENST00000603683 238 ntBASIC18.97■□□□□ 0.63
LRRC3BQ96PB8 CCNC-219ENST00000627680 896 ntTSL 5 BASIC18.97■□□□□ 0.63
LRRC3BQ96PB8 HSP90B1-211ENST00000640977 1127 ntTSL 5 BASIC18.97■□□□□ 0.63
LRRC3BQ96PB8 AD000671.2-201ENST00000589807 1925 ntAPPRIS P1 TSL 2 BASIC18.97■□□□□ 0.63
LRRC3BQ96PB8 LRRC61-201ENST00000323078 1684 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
LRRC3BQ96PB8 SMN1-204ENST00000506163 1445 ntAPPRIS ALT2 TSL 1 (best) BASIC18.97■□□□□ 0.63
LRRC3BQ96PB8 SOS2-201ENST00000216373 5498 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
LRRC3BQ96PB8 WDR88-202ENST00000361680 1835 ntAPPRIS ALT2 TSL 1 (best) BASIC18.97■□□□□ 0.63
LRRC3BQ96PB8 DLK2-203ENST00000372488 1590 ntAPPRIS P3 TSL 1 (best) BASIC18.97■□□□□ 0.63
LRRC3BQ96PB8 SLC47A1-202ENST00000395585 1998 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
LRRC3BQ96PB8 TMEM128-201ENST00000254742 1737 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
LRRC3BQ96PB8 SNAI3-201ENST00000332281 1732 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
LRRC3BQ96PB8 CLN3-204ENST00000357857 1720 ntTSL 2 BASIC18.97■□□□□ 0.63
LRRC3BQ96PB8 SNX17-201ENST00000233575 2044 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
LRRC3BQ96PB8 P2RX5-202ENST00000345901 2031 ntTSL 5 BASIC18.96■□□□□ 0.63
LRRC3BQ96PB8 BRAF-201ENST00000288602 2480 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
LRRC3BQ96PB8 CDK2AP2-201ENST00000301488 1378 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
LRRC3BQ96PB8 KCNQ5-208ENST00000414165 6236 ntTSL 5 BASIC18.96■□□□□ 0.63
LRRC3BQ96PB8 TMEM106C-202ENST00000429772 1515 ntAPPRIS P1 TSL 2 BASIC18.96■□□□□ 0.63
LRRC3BQ96PB8 RSPH14-201ENST00000216036 1291 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
LRRC3BQ96PB8 ROMO1-204ENST00000374078 498 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
LRRC3BQ96PB8 DYNLL1-203ENST00000392509 814 ntAPPRIS P1 TSL 3 BASIC18.96■□□□□ 0.63
LRRC3BQ96PB8 CXorf40A-202ENST00000393985 1148 ntAPPRIS P3 TSL 1 (best) BASIC18.96■□□□□ 0.63
LRRC3BQ96PB8 GPR75-201ENST00000394705 2115 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
LRRC3BQ96PB8 EXOSC3-202ENST00000396521 768 ntTSL 2 BASIC18.96■□□□□ 0.63
LRRC3BQ96PB8 PAX3-208ENST00000409828 1254 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
LRRC3BQ96PB8 LSM5-204ENST00000409909 740 ntTSL 2 BASIC18.96■□□□□ 0.63
LRRC3BQ96PB8 ERCC5-207ENST00000535557 1125 ntTSL 5 BASIC18.96■□□□□ 0.63
LRRC3BQ96PB8 BCL2L12-210ENST00000611631 1259 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
LRRC3BQ96PB8 VPS51-217ENST00000639871 243 ntTSL 5 BASIC18.96■□□□□ 0.63
LRRC3BQ96PB8 PDIA2-202ENST00000404312 1575 ntAPPRIS ALT2 TSL 5 BASIC18.96■□□□□ 0.63
LRRC3BQ96PB8 SYT7-201ENST00000263846 4854 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
LRRC3BQ96PB8 PHYKPL-201ENST00000308158 2038 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
LRRC3BQ96PB8 ANXA8L1-201ENST00000584982 2174 ntTSL 2 BASIC18.96■□□□□ 0.63
LRRC3BQ96PB8 FHL1-219ENST00000618438 2178 ntTSL 3 BASIC18.96■□□□□ 0.63
LRRC3BQ96PB8 KCTD13-207ENST00000568000 2528 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
LRRC3BQ96PB8 FGFR2-224ENST00000613048 4369 ntTSL 5 BASIC18.95■□□□□ 0.62
LRRC3BQ96PB8 AC073130.3-201ENST00000624389 2278 ntBASIC18.95■□□□□ 0.62
LRRC3BQ96PB8 CHMP6-201ENST00000325167 1664 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
LRRC3BQ96PB8 ONECUT3-201ENST00000382349 8318 ntAPPRIS P1 TSL 5 BASIC18.95■□□□□ 0.62
LRRC3BQ96PB8 PSRC1-202ENST00000369904 1584 ntAPPRIS ALT2 TSL 1 (best) BASIC18.95■□□□□ 0.62
LRRC3BQ96PB8 CFC1-203ENST00000621673 1444 ntTSL 2 BASIC18.95■□□□□ 0.62
LRRC3BQ96PB8 PRMT2-201ENST00000291705 1011 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
LRRC3BQ96PB8 BEX4-201ENST00000372691 1066 ntAPPRIS P1 TSL 2 BASIC18.95■□□□□ 0.62
LRRC3BQ96PB8 NTMT1-205ENST00000459968 1123 ntTSL 2 BASIC18.95■□□□□ 0.62
LRRC3BQ96PB8 PQLC2L-205ENST00000461040 563 ntAPPRIS ALT2 TSL 3 BASIC18.95■□□□□ 0.62
LRRC3BQ96PB8 RPP14-206ENST00000466547 805 ntAPPRIS P1 TSL 3 BASIC18.95■□□□□ 0.62
LRRC3BQ96PB8 NTMT1-207ENST00000482347 1072 ntTSL 2 BASIC18.95■□□□□ 0.62
LRRC3BQ96PB8 AF238378.1-201ENST00000526806 358 ntBASIC18.95■□□□□ 0.62
LRRC3BQ96PB8 PAQR4-204ENST00000574988 869 ntTSL 2 BASIC18.95■□□□□ 0.62
Retrieved 100 of 98,524 protein–RNA pairs in 41.5 ms