Protein–RNA interactions for Protein: Q96LR5

UBE2E2, Ubiquitin-conjugating enzyme E2 E2, humanhuman

Predictions only

Length 201 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2E2Q96LR5 MIR3917-201ENST00000580971 93 ntBASIC14.4□□□□□ -0.1
UBE2E2Q96LR5 GOLGA2P10-205ENST00000618267 983 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
UBE2E2Q96LR5 EBLN3P-205ENST00000629870 958 ntTSL 3 BASIC14.4□□□□□ -0.1
UBE2E2Q96LR5 AL772307.1-201ENST00000639363 1066 ntTSL 2 BASIC14.4□□□□□ -0.1
UBE2E2Q96LR5 CHRNA10-201ENST00000250699 1945 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
UBE2E2Q96LR5 THOP1-201ENST00000307741 4804 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
UBE2E2Q96LR5 GNB1-209ENST00000610897 3145 ntAPPRIS P1 TSL 5 BASIC14.4□□□□□ -0.1
UBE2E2Q96LR5 IDH3G-202ENST00000370092 1712 ntTSL 5 BASIC14.4□□□□□ -0.1
UBE2E2Q96LR5 CD19-206ENST00000567541 1707 ntAPPRIS ALT2 TSL 1 (best) BASIC14.4□□□□□ -0.1
UBE2E2Q96LR5 AIRE-201ENST00000291582 2257 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
UBE2E2Q96LR5 MTMR9LP-203ENST00000426597 1545 ntBASIC14.4□□□□□ -0.1
UBE2E2Q96LR5 EFEMP2-210ENST00000528176 1504 ntTSL 5 BASIC14.4□□□□□ -0.1
UBE2E2Q96LR5 RAX-202ENST00000334889 3197 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
UBE2E2Q96LR5 WNT10A-201ENST00000258411 2547 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
UBE2E2Q96LR5 WFDC1-203ENST00000568638 1319 ntAPPRIS P1 TSL 2 BASIC14.4□□□□□ -0.1
UBE2E2Q96LR5 SOWAHC-201ENST00000356454 4657 ntAPPRIS P1 BASIC14.39□□□□□ -0.11
UBE2E2Q96LR5 COL13A1-201ENST00000354547 3027 ntAPPRIS ALT2 TSL 5 BASIC14.39□□□□□ -0.11
UBE2E2Q96LR5 CPQ-201ENST00000220763 1947 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
UBE2E2Q96LR5 MAP3K7CL-206ENST00000399928 1904 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
UBE2E2Q96LR5 BTG3-201ENST00000339775 1485 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
UBE2E2Q96LR5 PHLDA3-202ENST00000367311 2640 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
UBE2E2Q96LR5 PDCD10-201ENST00000392750 2067 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
UBE2E2Q96LR5 FGFR3-205ENST00000440486 4287 ntAPPRIS P3 TSL 5 BASIC14.39□□□□□ -0.11
UBE2E2Q96LR5 KHDC1-201ENST00000257765 1134 ntAPPRIS P3 TSL 1 (best) BASIC14.39□□□□□ -0.11
UBE2E2Q96LR5 SNCB-202ENST00000393693 1234 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
UBE2E2Q96LR5 AL031133.1-201ENST00000406807 723 ntBASIC14.39□□□□□ -0.11
UBE2E2Q96LR5 AC112907.2-201ENST00000448639 330 ntBASIC14.39□□□□□ -0.11
UBE2E2Q96LR5 C7orf49-209ENST00000483029 596 ntTSL 2 BASIC14.39□□□□□ -0.11
UBE2E2Q96LR5 LY6E-213ENST00000522528 606 ntTSL 3 BASIC14.39□□□□□ -0.11
UBE2E2Q96LR5 AP002807.1-202ENST00000526897 791 ntTSL 2 BASIC14.39□□□□□ -0.11
UBE2E2Q96LR5 PRTN3-202ENST00000544537 1036 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
UBE2E2Q96LR5 CLN6-204ENST00000564752 900 ntTSL 3 BASIC14.39□□□□□ -0.11
UBE2E2Q96LR5 AC010240.3-201ENST00000607688 395 ntBASIC14.39□□□□□ -0.11
UBE2E2Q96LR5 KHDC1-207ENST00000610435 1101 ntAPPRIS P3 TSL 5 BASIC14.39□□□□□ -0.11
UBE2E2Q96LR5 AL121956.5-201ENST00000625261 221 ntBASIC14.39□□□□□ -0.11
UBE2E2Q96LR5 NDUFAB1-201ENST00000007516 717 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
UBE2E2Q96LR5 LRP4-201ENST00000378623 8076 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
UBE2E2Q96LR5 DNAJC28-204ENST00000617313 2237 ntAPPRIS P1 TSL 5 BASIC14.39□□□□□ -0.11
UBE2E2Q96LR5 STXBP2-202ENST00000414284 1859 ntAPPRIS ALT1 TSL 1 (best) BASIC14.39□□□□□ -0.11
UBE2E2Q96LR5 P2RX2-208ENST00000542301 1881 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
UBE2E2Q96LR5 CYP51A1P1-201ENST00000492267 1507 ntBASIC14.39□□□□□ -0.11
UBE2E2Q96LR5 FNBP1-202ENST00000420781 5410 ntAPPRIS ALT1 TSL 1 (best) BASIC14.39□□□□□ -0.11
UBE2E2Q96LR5 NOMO1-201ENST00000287667 4355 ntAPPRIS P2 TSL 1 (best) BASIC14.39□□□□□ -0.11
UBE2E2Q96LR5 PDE4DIP-214ENST00000479408 2746 ntTSL 5 BASIC14.39□□□□□ -0.11
UBE2E2Q96LR5 CPAMD8-203ENST00000443236 5992 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
UBE2E2Q96LR5 STARD10-213ENST00000538536 1678 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
UBE2E2Q96LR5 MXD3-202ENST00000427908 2269 ntTSL 2 BASIC14.39□□□□□ -0.11
UBE2E2Q96LR5 CYB561-205ENST00000542042 1302 ntTSL 2 BASIC14.39□□□□□ -0.11
UBE2E2Q96LR5 SPTBN4-202ENST00000352632 8676 ntAPPRIS P2 TSL 5 BASIC14.39□□□□□ -0.11
UBE2E2Q96LR5 SPTBN4-204ENST00000392025 8671 ntAPPRIS ALT1 TSL 5 BASIC14.39□□□□□ -0.11
UBE2E2Q96LR5 SKOR2-202ENST00000425639 3899 ntAPPRIS ALT2 TSL 5 BASIC14.39□□□□□ -0.11
UBE2E2Q96LR5 EDNRA-206ENST00000511804 1569 ntTSL 2 BASIC14.39□□□□□ -0.11
UBE2E2Q96LR5 ZDHHC3-205ENST00000424952 2687 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
UBE2E2Q96LR5 PCDHA4-201ENST00000378125 2328 ntTSL 5 BASIC14.38□□□□□ -0.11
UBE2E2Q96LR5 DISP3-202ENST00000304391 1495 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
UBE2E2Q96LR5 EEF1AKMT2-201ENST00000368836 1462 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
UBE2E2Q96LR5 CLN3-204ENST00000357857 1720 ntTSL 2 BASIC14.38□□□□□ -0.11
UBE2E2Q96LR5 SPAG1-206ENST00000520643 1723 ntTSL 2 BASIC14.38□□□□□ -0.11
UBE2E2Q96LR5 ARID3A-201ENST00000263620 5941 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
UBE2E2Q96LR5 P2RX5-203ENST00000547178 1998 ntAPPRIS ALT2 TSL 1 (best) BASIC14.38□□□□□ -0.11
UBE2E2Q96LR5 ATXN2-227ENST00000616825 4575 ntAPPRIS ALT2 TSL 5 BASIC14.38□□□□□ -0.11
UBE2E2Q96LR5 SLC9A6-201ENST00000370695 4725 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
UBE2E2Q96LR5 UBP1-202ENST00000283629 4148 ntAPPRIS P3 TSL 1 (best) BASIC14.38□□□□□ -0.11
UBE2E2Q96LR5 ZNF655-202ENST00000320583 1601 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
UBE2E2Q96LR5 SHROOM1-202ENST00000378676 2352 ntAPPRIS ALT2 TSL 5 BASIC14.38□□□□□ -0.11
UBE2E2Q96LR5 MEN1-209ENST00000394376 3034 ntAPPRIS P3 TSL 5 BASIC14.38□□□□□ -0.11
UBE2E2Q96LR5 VSTM2A-203ENST00000404951 2521 ntTSL 5 BASIC14.38□□□□□ -0.11
UBE2E2Q96LR5 SPAG16-204ENST00000413312 2258 ntTSL 5 BASIC14.38□□□□□ -0.11
UBE2E2Q96LR5 OGFOD2-201ENST00000228922 1780 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
UBE2E2Q96LR5 UHRF1-203ENST00000615884 2651 ntAPPRIS P1 TSL 2 BASIC14.38□□□□□ -0.11
UBE2E2Q96LR5 PBXIP1-201ENST00000368460 1175 ntAPPRIS ALT2 TSL 3 BASIC14.38□□□□□ -0.11
UBE2E2Q96LR5 TSPY8-203ENST00000383005 435 ntTSL 5 BASIC14.38□□□□□ -0.11
UBE2E2Q96LR5 SPDYE15P-201ENST00000424157 909 ntBASIC14.38□□□□□ -0.11
UBE2E2Q96LR5 KRT18P38-201ENST00000449496 1282 ntBASIC14.38□□□□□ -0.11
UBE2E2Q96LR5 AL109797.1-201ENST00000452501 835 ntTSL 2 BASIC14.38□□□□□ -0.11
UBE2E2Q96LR5 PRKCB-209ENST00000498058 480 ntTSL 3 BASIC14.38□□□□□ -0.11
UBE2E2Q96LR5 AC087623.2-201ENST00000528407 534 ntTSL 4 BASIC14.38□□□□□ -0.11
UBE2E2Q96LR5 C12orf76-204ENST00000547573 607 ntTSL 3 BASIC14.38□□□□□ -0.11
UBE2E2Q96LR5 AC020558.2-201ENST00000582325 795 ntTSL 3 BASIC14.38□□□□□ -0.11
UBE2E2Q96LR5 DBP-204ENST00000599385 709 ntTSL 3 BASIC14.38□□□□□ -0.11
UBE2E2Q96LR5 FGF14-AS2-201ENST00000606448 1074 ntBASIC14.38□□□□□ -0.11
UBE2E2Q96LR5 RNF135-201ENST00000324689 1905 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
UBE2E2Q96LR5 JPH2-201ENST00000342272 1923 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
UBE2E2Q96LR5 ZBED3-AS1-208ENST00000512001 1668 ntTSL 3 BASIC14.38□□□□□ -0.11
UBE2E2Q96LR5 AC012615.6-201ENST00000593201 1697 ntTSL 2 BASIC14.38□□□□□ -0.11
UBE2E2Q96LR5 SPAG9-202ENST00000357122 4761 ntAPPRIS P2 TSL 1 (best) BASIC14.38□□□□□ -0.11
UBE2E2Q96LR5 TM7SF3-201ENST00000343028 2709 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
UBE2E2Q96LR5 AC129492.1-201ENST00000399413 1804 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
UBE2E2Q96LR5 CD55-201ENST00000314754 2220 ntAPPRIS ALT2 TSL 1 (best) BASIC14.38□□□□□ -0.11
UBE2E2Q96LR5 EGFR-202ENST00000342916 2239 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
UBE2E2Q96LR5 MSL1-202ENST00000398532 4707 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
UBE2E2Q96LR5 ATP2A2-201ENST00000308664 4453 ntAPPRIS ALT1 TSL 1 (best) BASIC14.38□□□□□ -0.11
UBE2E2Q96LR5 ACADS-201ENST00000242592 1950 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
UBE2E2Q96LR5 SLC6A11-202ENST00000454147 2794 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
UBE2E2Q96LR5 CPZ-201ENST00000315782 2136 ntAPPRIS P3 TSL 1 (best) BASIC14.38□□□□□ -0.11
UBE2E2Q96LR5 HOXB9-201ENST00000311177 2581 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
UBE2E2Q96LR5 BHLHE22-201ENST00000321870 3262 ntAPPRIS P1 BASIC14.37□□□□□ -0.11
UBE2E2Q96LR5 AP5S1-202ENST00000379567 1791 ntAPPRIS P1 TSL 2 BASIC14.37□□□□□ -0.11
UBE2E2Q96LR5 RNF113B-201ENST00000267291 1376 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
UBE2E2Q96LR5 ZIC1-201ENST00000282928 5241 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Retrieved 100 of 98,524 protein–RNA pairs in 23.8 ms