Protein–RNA interactions for Protein: Q96CU9

FOXRED1, FAD-dependent oxidoreductase domain-containing protein 1, humanhuman

Predicted RBP Predictions only

Length 486 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FOXRED1Q96CU9 GPS2-201ENST00000380728 1379 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
FOXRED1Q96CU9 MSANTD1-201ENST00000438480 2922 ntAPPRIS P3 TSL 5 BASIC16.18■□□□□ 0.18
FOXRED1Q96CU9 SAMD11-215ENST00000618779 2368 ntAPPRIS ALT2 TSL 5 BASIC16.18■□□□□ 0.18
FOXRED1Q96CU9 PODNL1-203ENST00000538371 1826 ntAPPRIS ALT2 TSL 2 BASIC16.18■□□□□ 0.18
FOXRED1Q96CU9 SLC25A6P5-201ENST00000435663 894 ntBASIC16.18■□□□□ 0.18
FOXRED1Q96CU9 RNF135-204ENST00000443677 1261 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
FOXRED1Q96CU9 RTBDN-203ENST00000458671 1066 ntAPPRIS ALT2 TSL 1 (best) BASIC16.18■□□□□ 0.18
FOXRED1Q96CU9 LCN6-203ENST00000476567 1015 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
FOXRED1Q96CU9 AC073912.1-201ENST00000546264 587 ntTSL 3 BASIC16.18■□□□□ 0.18
FOXRED1Q96CU9 C19orf25-213ENST00000592872 1287 ntAPPRIS P1 TSL 2 BASIC16.18■□□□□ 0.18
FOXRED1Q96CU9 TMEM191A-211ENST00000637163 1067 ntBASIC16.18■□□□□ 0.18
FOXRED1Q96CU9 FZD10-201ENST00000229030 3281 ntAPPRIS P1 BASIC16.18■□□□□ 0.18
FOXRED1Q96CU9 MINPP1-201ENST00000371994 2183 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
FOXRED1Q96CU9 SAAL1-201ENST00000300013 1518 ntAPPRIS ALT1 TSL 2 BASIC16.18■□□□□ 0.18
FOXRED1Q96CU9 C2CD2L-205ENST00000528586 2320 ntTSL 2 BASIC16.18■□□□□ 0.18
FOXRED1Q96CU9 KAT2A-201ENST00000225916 3109 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
FOXRED1Q96CU9 NECTIN3-211ENST00000493615 1876 ntAPPRIS ALT2 TSL 2 BASIC16.18■□□□□ 0.18
FOXRED1Q96CU9 NOMO3-201ENST00000263012 3911 ntAPPRIS ALT2 TSL 1 (best) BASIC16.18■□□□□ 0.18
FOXRED1Q96CU9 VPS37B-201ENST00000267202 3028 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
FOXRED1Q96CU9 AJUBA-202ENST00000361265 2569 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
FOXRED1Q96CU9 ARPIN-202ENST00000460685 2145 ntTSL 2 BASIC16.18■□□□□ 0.18
FOXRED1Q96CU9 PRDM12-201ENST00000253008 2476 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
FOXRED1Q96CU9 SLC25A51-202ENST00000377716 1691 ntAPPRIS P1 TSL 3 BASIC16.18■□□□□ 0.18
FOXRED1Q96CU9 ST6GALNAC6-201ENST00000291839 2280 ntAPPRIS P3 TSL 1 (best) BASIC16.17■□□□□ 0.18
FOXRED1Q96CU9 RPRM-201ENST00000325926 1471 ntAPPRIS P1 BASIC16.17■□□□□ 0.18
FOXRED1Q96CU9 SPART-209ENST00000494062 3018 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
FOXRED1Q96CU9 MECP2-205ENST00000453960 1729 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
FOXRED1Q96CU9 ZNF354C-201ENST00000315475 5411 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
FOXRED1Q96CU9 SPC24-206ENST00000592540 2315 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
FOXRED1Q96CU9 SHISA3-201ENST00000319234 1971 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
FOXRED1Q96CU9 ASXL1-212ENST00000620121 5374 ntAPPRIS ALT2 TSL 5 BASIC16.17■□□□□ 0.18
FOXRED1Q96CU9 RTL8A-201ENST00000370775 1244 ntAPPRIS P1 BASIC16.17■□□□□ 0.18
FOXRED1Q96CU9 DYNLT3-203ENST00000432389 719 ntTSL 5 BASIC16.17■□□□□ 0.18
FOXRED1Q96CU9 LINC00595-207ENST00000476909 792 ntTSL 2 BASIC16.17■□□□□ 0.18
FOXRED1Q96CU9 DHRS4-206ENST00000558581 1143 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
FOXRED1Q96CU9 CMTM3-207ENST00000564060 824 ntTSL 2 BASIC16.17■□□□□ 0.18
FOXRED1Q96CU9 CMTM3-211ENST00000565922 615 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
FOXRED1Q96CU9 AC008403.3-201ENST00000598924 454 ntBASIC16.17■□□□□ 0.18
FOXRED1Q96CU9 ZSWIM8-223ENST00000605216 6004 ntAPPRIS P2 TSL 1 (best) BASIC16.17■□□□□ 0.18
FOXRED1Q96CU9 SAMD11-210ENST00000616016 2391 ntTSL 5 BASIC16.17■□□□□ 0.18
FOXRED1Q96CU9 MTMR9LP-203ENST00000426597 1545 ntBASIC16.17■□□□□ 0.18
FOXRED1Q96CU9 PDLIM3-202ENST00000284770 1766 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
FOXRED1Q96CU9 TMEM235-203ENST00000550981 1786 ntTSL 2 BASIC16.17■□□□□ 0.18
FOXRED1Q96CU9 KCNT1-202ENST00000371757 4717 ntAPPRIS P3 TSL 1 (best) BASIC16.17■□□□□ 0.18
FOXRED1Q96CU9 POU5F1-201ENST00000259915 1420 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
FOXRED1Q96CU9 ASB18-201ENST00000409749 1401 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
FOXRED1Q96CU9 LINC02028-204ENST00000449350 1419 ntTSL 3 BASIC16.17■□□□□ 0.18
FOXRED1Q96CU9 ETV7-205ENST00000538992 1434 ntTSL 2 BASIC16.17■□□□□ 0.18
FOXRED1Q96CU9 OLFM2-203ENST00000590841 1665 ntTSL 2 BASIC16.17■□□□□ 0.18
FOXRED1Q96CU9 AP2M1-201ENST00000292807 1931 ntAPPRIS P4 TSL 5 BASIC16.17■□□□□ 0.18
FOXRED1Q96CU9 PCBP3-205ENST00000400310 2168 ntTSL 2 BASIC16.17■□□□□ 0.18
FOXRED1Q96CU9 SIN3A-203ENST00000394949 4930 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
FOXRED1Q96CU9 PROSER1-201ENST00000352251 5168 ntAPPRIS P2 TSL 1 (best) BASIC16.17■□□□□ 0.18
FOXRED1Q96CU9 CORO6-210ENST00000580212 2345 ntTSL 5 BASIC16.17■□□□□ 0.18
FOXRED1Q96CU9 COPS7A-210ENST00000539735 1832 ntAPPRIS P1 TSL 5 BASIC16.17■□□□□ 0.18
FOXRED1Q96CU9 ESPN-202ENST00000416731 1338 ntTSL 5 BASIC16.17■□□□□ 0.18
FOXRED1Q96CU9 MYBL2-202ENST00000396863 2704 ntTSL 2 BASIC16.17■□□□□ 0.18
FOXRED1Q96CU9 POLI-207ENST00000579434 2705 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
FOXRED1Q96CU9 ISY1-201ENST00000273541 1704 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
FOXRED1Q96CU9 LINC00466-207ENST00000634725 1736 ntTSL 5 BASIC16.16■□□□□ 0.18
FOXRED1Q96CU9 PGRMC2-208ENST00000613358 3783 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
FOXRED1Q96CU9 XYLT2-203ENST00000507602 2107 ntTSL 2 BASIC16.16■□□□□ 0.18
FOXRED1Q96CU9 THOP1-205ENST00000586677 1872 ntTSL 2 BASIC16.16■□□□□ 0.18
FOXRED1Q96CU9 IQSEC2-202ENST00000396435 6015 ntAPPRIS ALT2 TSL 1 (best) BASIC16.16■□□□□ 0.18
FOXRED1Q96CU9 AL365232.1-201ENST00000423730 1636 ntAPPRIS P1 TSL 5 BASIC16.16■□□□□ 0.18
FOXRED1Q96CU9 ZNF697-201ENST00000421812 5041 ntAPPRIS P1 TSL 3 BASIC16.16■□□□□ 0.18
FOXRED1Q96CU9 SOX15-201ENST00000250055 1396 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
FOXRED1Q96CU9 DAPK1-207ENST00000469640 5899 ntTSL 5 BASIC16.16■□□□□ 0.18
FOXRED1Q96CU9 KRT8P41-201ENST00000533985 1514 ntBASIC16.16■□□□□ 0.18
FOXRED1Q96CU9 ALDH1A3-201ENST00000329841 3924 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
FOXRED1Q96CU9 ARHGAP35-201ENST00000404338 8889 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
FOXRED1Q96CU9 TRIM9-201ENST00000298355 5284 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
FOXRED1Q96CU9 LINC01168-201ENST00000461291 5254 ntTSL 2 BASIC16.16■□□□□ 0.18
FOXRED1Q96CU9 MCOLN1-201ENST00000264079 2082 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
FOXRED1Q96CU9 ADRA1A-205ENST00000380582 2089 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
FOXRED1Q96CU9 AC008764.6-201ENST00000595909 2069 ntBASIC16.16■□□□□ 0.18
FOXRED1Q96CU9 KDSR-202ENST00000406396 5447 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
FOXRED1Q96CU9 SERTAD4-AS1-201ENST00000437764 726 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
FOXRED1Q96CU9 AC128676.1-201ENST00000454392 318 ntBASIC16.16■□□□□ 0.18
FOXRED1Q96CU9 ZNF529-AS1-202ENST00000475219 1033 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
FOXRED1Q96CU9 RNASEK-202ENST00000548577 810 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
FOXRED1Q96CU9 AC069544.1-201ENST00000609399 999 ntBASIC16.16■□□□□ 0.18
FOXRED1Q96CU9 AC073648.6-201ENST00000641589 218 ntBASIC16.16■□□□□ 0.18
FOXRED1Q96CU9 QPCTL-202ENST00000366382 1814 ntTSL 2 BASIC16.16■□□□□ 0.18
FOXRED1Q96CU9 PPP1R7-201ENST00000234038 2386 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
FOXRED1Q96CU9 TADA3-201ENST00000301964 2355 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
FOXRED1Q96CU9 MINDY2-202ENST00000450403 4820 ntAPPRIS ALT2 TSL 1 (best) BASIC16.16■□□□□ 0.18
FOXRED1Q96CU9 SNAPC3-202ENST00000380821 5680 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
FOXRED1Q96CU9 GCSH-201ENST00000315467 1597 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
FOXRED1Q96CU9 TMEM65-201ENST00000297632 9029 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
FOXRED1Q96CU9 CLN3-204ENST00000357857 1720 ntTSL 2 BASIC16.16■□□□□ 0.18
FOXRED1Q96CU9 ZNF114-206ENST00000600687 1742 ntAPPRIS P1 TSL 5 BASIC16.16■□□□□ 0.18
FOXRED1Q96CU9 ZNF302-215ENST00000627982 1723 ntAPPRIS ALT2 TSL 5 BASIC16.16■□□□□ 0.18
FOXRED1Q96CU9 MCF2L-208ENST00000397030 6580 ntTSL 2 BASIC16.16■□□□□ 0.18
FOXRED1Q96CU9 KHNYN-206ENST00000556842 2443 ntAPPRIS P1 TSL 2 BASIC16.16■□□□□ 0.18
FOXRED1Q96CU9 DHX33-201ENST00000225296 5618 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
FOXRED1Q96CU9 ASZ1-201ENST00000284629 1865 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
FOXRED1Q96CU9 VAV2-203ENST00000406606 4691 ntAPPRIS P2 TSL 1 (best) BASIC16.16■□□□□ 0.18
FOXRED1Q96CU9 KRT8P32-201ENST00000512863 1461 ntBASIC16.16■□□□□ 0.18
FOXRED1Q96CU9 PCBP4-210ENST00000471622 1784 ntTSL 5 BASIC16.15■□□□□ 0.18
Retrieved 100 of 98,524 protein–RNA pairs in 33.1 ms