Protein–RNA interactions for Protein: Q8WWV3

RTN4IP1, Reticulon-4-interacting protein 1, mitochondrial, humanhuman

Predicted RBP Predictions only

Length 396 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RTN4IP1Q8WWV3 ZNF326-202ENST00000361911 1538 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
RTN4IP1Q8WWV3 MAPRE3-201ENST00000233121 1892 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
RTN4IP1Q8WWV3 PRKCB-202ENST00000321728 2689 ntAPPRIS ALT1 TSL 1 (best) BASIC15.67■□□□□ 0.1
RTN4IP1Q8WWV3 ENTPD6-209ENST00000433259 2654 ntTSL 5 BASIC15.67■□□□□ 0.1
RTN4IP1Q8WWV3 MEF2B-204ENST00000424583 1405 ntAPPRIS P1 TSL 5 BASIC15.67■□□□□ 0.1
RTN4IP1Q8WWV3 TWF2-203ENST00000499914 1440 ntTSL 5 BASIC15.67■□□□□ 0.1
RTN4IP1Q8WWV3 SLC6A18-201ENST00000324642 2121 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
RTN4IP1Q8WWV3 SLC39A5-201ENST00000266980 2031 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
RTN4IP1Q8WWV3 CCDC157-203ENST00000405659 3052 ntAPPRIS P3 TSL 1 (best) BASIC15.66■□□□□ 0.1
RTN4IP1Q8WWV3 KMT5B-206ENST00000405515 2869 ntTSL 5 BASIC15.66■□□□□ 0.1
RTN4IP1Q8WWV3 SLC6A17-201ENST00000331565 6427 ntAPPRIS P1 TSL 2 BASIC15.66■□□□□ 0.1
RTN4IP1Q8WWV3 NXNL2-202ENST00000375855 1457 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
RTN4IP1Q8WWV3 C19orf66-209ENST00000591813 1481 ntAPPRIS ALT2 TSL 1 (best) BASIC15.66■□□□□ 0.1
RTN4IP1Q8WWV3 CEMP1-202ENST00000567119 1374 ntAPPRIS P2 BASIC15.66■□□□□ 0.1
RTN4IP1Q8WWV3 UBQLN4-201ENST00000368309 3576 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
RTN4IP1Q8WWV3 TSPY8-201ENST00000287721 1161 ntAPPRIS P5 TSL 1 (best) BASIC15.66■□□□□ 0.1
RTN4IP1Q8WWV3 RPP25L-201ENST00000297613 1092 ntAPPRIS P1 TSL 2 BASIC15.66■□□□□ 0.1
RTN4IP1Q8WWV3 TSPY10-201ENST00000428845 1161 ntAPPRIS P5 TSL 1 (best) BASIC15.66■□□□□ 0.1
RTN4IP1Q8WWV3 NDUFAF3-204ENST00000451378 774 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
RTN4IP1Q8WWV3 Z98884.1-201ENST00000451646 830 ntTSL 3 BASIC15.66■□□□□ 0.1
RTN4IP1Q8WWV3 TSPY3-203ENST00000457222 1161 ntAPPRIS P5 TSL 1 (best) BASIC15.66■□□□□ 0.1
RTN4IP1Q8WWV3 IAH1-215ENST00000497473 1266 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
RTN4IP1Q8WWV3 SBF2-AS1-202ENST00000499953 854 ntTSL 5 BASIC15.66■□□□□ 0.1
RTN4IP1Q8WWV3 AL691442.1-201ENST00000505139 1042 ntAPPRIS P1 TSL 2 BASIC15.66■□□□□ 0.1
RTN4IP1Q8WWV3 LINC01301-204ENST00000530725 577 ntTSL 4 BASIC15.66■□□□□ 0.1
RTN4IP1Q8WWV3 MTFP1-206ENST00000629597 482 ntTSL 5 BASIC15.66■□□□□ 0.1
RTN4IP1Q8WWV3 SLC35A2-213ENST00000635015 1008 ntTSL 2 BASIC15.66■□□□□ 0.1
RTN4IP1Q8WWV3 TACSTD2-201ENST00000371225 2351 ntAPPRIS P1 BASIC15.66■□□□□ 0.1
RTN4IP1Q8WWV3 TMEM175-220ENST00000515740 1514 ntTSL 3 BASIC15.66■□□□□ 0.1
RTN4IP1Q8WWV3 B4GALT2-202ENST00000356836 2629 ntAPPRIS P1 TSL 2 BASIC15.66■□□□□ 0.1
RTN4IP1Q8WWV3 F11R-202ENST00000368026 4835 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
RTN4IP1Q8WWV3 FAM135A-209ENST00000505769 4806 ntTSL 5 BASIC15.66■□□□□ 0.1
RTN4IP1Q8WWV3 PFN2-203ENST00000452853 1780 ntAPPRIS ALT1 TSL 1 (best) BASIC15.66■□□□□ 0.1
RTN4IP1Q8WWV3 PHKA1-201ENST00000339490 6121 ntAPPRIS ALT1 TSL 1 (best) BASIC15.66■□□□□ 0.1
RTN4IP1Q8WWV3 OGG1-201ENST00000302003 1655 ntAPPRIS P4 TSL 1 (best) BASIC15.66■□□□□ 0.1
RTN4IP1Q8WWV3 BCAP29-202ENST00000379117 1946 ntAPPRIS P1 TSL 5 BASIC15.66■□□□□ 0.1
RTN4IP1Q8WWV3 KLHL21-202ENST00000377663 6445 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
RTN4IP1Q8WWV3 PXK-206ENST00000463280 2825 ntTSL 2 BASIC15.66■□□□□ 0.1
RTN4IP1Q8WWV3 PODN-203ENST00000395871 2744 ntTSL 5 BASIC15.66■□□□□ 0.1
RTN4IP1Q8WWV3 TMEM74-201ENST00000297459 1741 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
RTN4IP1Q8WWV3 CYP2F1-201ENST00000331105 1720 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
RTN4IP1Q8WWV3 DCLK1-203ENST00000379892 2101 ntTSL 5 BASIC15.65■□□□□ 0.1
RTN4IP1Q8WWV3 BAZ1B-201ENST00000339594 6102 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
RTN4IP1Q8WWV3 CLDN5-202ENST00000406028 2548 ntTSL 2 BASIC15.65■□□□□ 0.1
RTN4IP1Q8WWV3 GCSH-208ENST00000639169 2537 ntTSL 2 BASIC15.65■□□□□ 0.1
RTN4IP1Q8WWV3 SAR1B-208ENST00000507419 2287 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
RTN4IP1Q8WWV3 RABL6-201ENST00000311502 3091 ntAPPRIS P3 TSL 1 (best) BASIC15.65■□□□□ 0.1
RTN4IP1Q8WWV3 FAM3A-203ENST00000369641 1359 ntTSL 5 BASIC15.65■□□□□ 0.1
RTN4IP1Q8WWV3 LGALS9C-209ENST00000581545 1378 ntTSL 5 BASIC15.65■□□□□ 0.1
RTN4IP1Q8WWV3 SLC43A1-201ENST00000278426 2598 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
RTN4IP1Q8WWV3 MRPS2-201ENST00000241600 1510 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
RTN4IP1Q8WWV3 FIBIN-201ENST00000318627 1938 ntAPPRIS P1 BASIC15.65■□□□□ 0.1
RTN4IP1Q8WWV3 QPRT-202ENST00000395384 2343 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
RTN4IP1Q8WWV3 DCAKD-208ENST00000614054 2054 ntAPPRIS P1 TSL 2 BASIC15.65■□□□□ 0.1
RTN4IP1Q8WWV3 MRGPRG-201ENST00000332314 870 ntAPPRIS P1 BASIC15.65■□□□□ 0.1
RTN4IP1Q8WWV3 F8A2-201ENST00000369505 1116 ntAPPRIS P1 BASIC15.65■□□□□ 0.1
RTN4IP1Q8WWV3 UBE2F-203ENST00000409633 837 ntTSL 3 BASIC15.65■□□□□ 0.1
RTN4IP1Q8WWV3 MAGI2-AS3-211ENST00000451809 707 ntTSL 3 BASIC15.65■□□□□ 0.1
RTN4IP1Q8WWV3 AC140479.4-201ENST00000561715 463 ntTSL 4 BASIC15.65■□□□□ 0.1
RTN4IP1Q8WWV3 KRTAP5-11-203ENST00000617152 558 ntAPPRIS ALT2 TSL 5 BASIC15.65■□□□□ 0.1
RTN4IP1Q8WWV3 FAM197Y4-202ENST00000622692 608 ntBASIC15.65■□□□□ 0.1
RTN4IP1Q8WWV3 REST-211ENST00000640168 1268 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
RTN4IP1Q8WWV3 SEPT2-245ENST00000616972 3446 ntTSL 2 BASIC15.65■□□□□ 0.1
RTN4IP1Q8WWV3 HSPA4-205ENST00000617074 2358 ntTSL 5 BASIC15.65■□□□□ 0.1
RTN4IP1Q8WWV3 UBFD1-201ENST00000395878 5110 ntAPPRIS P2 TSL 2 BASIC15.65■□□□□ 0.1
RTN4IP1Q8WWV3 KCTD2-201ENST00000322444 3635 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
RTN4IP1Q8WWV3 NPIPA8-201ENST00000525596 1565 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
RTN4IP1Q8WWV3 AKT1-211ENST00000554848 1595 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
RTN4IP1Q8WWV3 CD1E-205ENST00000368160 1727 ntAPPRIS ALT2 TSL 1 (best) BASIC15.65■□□□□ 0.1
RTN4IP1Q8WWV3 PRR23B-201ENST00000329447 1896 ntAPPRIS P1 BASIC15.65■□□□□ 0.1
RTN4IP1Q8WWV3 GATB-213ENST00000515812 1893 ntTSL 5 BASIC15.65■□□□□ 0.1
RTN4IP1Q8WWV3 WIPF1-202ENST00000359761 2003 ntAPPRIS P2 TSL 1 (best) BASIC15.65■□□□□ 0.1
RTN4IP1Q8WWV3 PLCB3-204ENST00000540288 4469 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.1
RTN4IP1Q8WWV3 MINDY2-202ENST00000450403 4820 ntAPPRIS ALT2 TSL 1 (best) BASIC15.64■□□□□ 0.09
RTN4IP1Q8WWV3 RXRB-202ENST00000374685 2846 ntAPPRIS ALT1 TSL 1 (best) BASIC15.64■□□□□ 0.09
RTN4IP1Q8WWV3 TBXA2R-204ENST00000589966 1814 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
RTN4IP1Q8WWV3 CPZ-201ENST00000315782 2136 ntAPPRIS P3 TSL 1 (best) BASIC15.64■□□□□ 0.09
RTN4IP1Q8WWV3 SLCO6A1-201ENST00000379807 2437 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
RTN4IP1Q8WWV3 DDHD1-201ENST00000323669 5503 ntTSL 2 BASIC15.64■□□□□ 0.09
RTN4IP1Q8WWV3 PRORSD1P-201ENST00000295112 541 ntBASIC15.64■□□□□ 0.09
RTN4IP1Q8WWV3 PMF1-BGLAP-202ENST00000368276 852 ntTSL 3 BASIC15.64■□□□□ 0.09
RTN4IP1Q8WWV3 BOLA1-203ENST00000369153 1096 ntAPPRIS P1 TSL 3 BASIC15.64■□□□□ 0.09
RTN4IP1Q8WWV3 MFSD4A-206ENST00000489709 1136 ntTSL 5 BASIC15.64■□□□□ 0.09
RTN4IP1Q8WWV3 FAM213B-215ENST00000537325 1096 ntAPPRIS ALT2 TSL 2 BASIC15.64■□□□□ 0.09
RTN4IP1Q8WWV3 AC007493.2-201ENST00000568427 478 ntTSL 3 BASIC15.64■□□□□ 0.09
RTN4IP1Q8WWV3 PRORSD1P-203ENST00000579162 626 ntTSL 5 BASIC15.64■□□□□ 0.09
RTN4IP1Q8WWV3 AC010531.6-201ENST00000602282 401 ntTSL 2 BASIC15.64■□□□□ 0.09
RTN4IP1Q8WWV3 RPL23AP53-202ENST00000606507 370 ntTSL 3 BASIC15.64■□□□□ 0.09
RTN4IP1Q8WWV3 KCNN4-209ENST00000615047 2029 ntTSL 5 BASIC15.64■□□□□ 0.09
RTN4IP1Q8WWV3 NR2F1-205ENST00000615873 1427 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
RTN4IP1Q8WWV3 AL359736.2-201ENST00000621992 437 ntBASIC15.64■□□□□ 0.09
RTN4IP1Q8WWV3 HLA-A-209ENST00000638375 975 ntBASIC15.64■□□□□ 0.09
RTN4IP1Q8WWV3 GABRD-205ENST00000638771 1707 ntAPPRIS ALT2 TSL 3 BASIC15.64■□□□□ 0.09
RTN4IP1Q8WWV3 GIT1-203ENST00000394869 3711 ntAPPRIS ALT2 TSL 1 (best) BASIC15.64■□□□□ 0.09
RTN4IP1Q8WWV3 MUTYH-202ENST00000355498 1776 ntAPPRIS ALT2 TSL 1 (best) BASIC15.64■□□□□ 0.09
RTN4IP1Q8WWV3 FBXO28-202ENST00000424254 1334 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
RTN4IP1Q8WWV3 KHNYN-206ENST00000556842 2443 ntAPPRIS P1 TSL 2 BASIC15.64■□□□□ 0.09
RTN4IP1Q8WWV3 ELF3-201ENST00000359651 4994 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
RTN4IP1Q8WWV3 SHISA3-201ENST00000319234 1971 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
RTN4IP1Q8WWV3 ARAP1-AS2-201ENST00000500163 1824 ntTSL 2 BASIC15.64■□□□□ 0.09
Retrieved 100 of 98,524 protein–RNA pairs in 19 ms