Protein–RNA interactions for Protein: Q8WVD3

RNF138, E3 ubiquitin-protein ligase RNF138, humanhuman

Predictions only

Length 245 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF138Q8WVD3 ZFC3H1-211ENST00000552037 1484 ntTSL 1 (best) BASIC16.77■□□□□ 0.28
RNF138Q8WVD3 IRGC-201ENST00000244314 1662 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
RNF138Q8WVD3 PPP2R2C-206ENST00000507294 1667 ntTSL 2 BASIC16.77■□□□□ 0.28
RNF138Q8WVD3 NMRK1-203ENST00000376811 2050 ntTSL 2 BASIC16.77■□□□□ 0.27
RNF138Q8WVD3 SLC39A4-201ENST00000276833 2297 ntTSL 2 BASIC16.77■□□□□ 0.27
RNF138Q8WVD3 GSEC-201ENST00000626810 2289 ntTSL 2 BASIC16.77■□□□□ 0.27
RNF138Q8WVD3 LYSMD4-202ENST00000344791 2885 ntTSL 1 (best) BASIC16.77■□□□□ 0.27
RNF138Q8WVD3 ZNF623-203ENST00000526926 2612 ntAPPRIS ALT2 TSL 2 BASIC16.77■□□□□ 0.27
RNF138Q8WVD3 C6orf223-202ENST00000439969 2757 ntTSL 2 BASIC16.77■□□□□ 0.27
RNF138Q8WVD3 KLF6-204ENST00000469435 2169 ntTSL 1 (best) BASIC16.77■□□□□ 0.27
RNF138Q8WVD3 ZNF655-203ENST00000357864 1370 ntTSL 2 BASIC16.77■□□□□ 0.27
RNF138Q8WVD3 GRK6-201ENST00000355472 2939 ntAPPRIS P3 TSL 1 (best) BASIC16.76■□□□□ 0.27
RNF138Q8WVD3 PCOLCE-AS1-201ENST00000442166 2537 ntTSL 2 BASIC16.76■□□□□ 0.27
RNF138Q8WVD3 INO80E-207ENST00000563197 2103 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
RNF138Q8WVD3 CD82-201ENST00000227155 2289 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
RNF138Q8WVD3 RTEL1-204ENST00000370003 2273 ntTSL 2 BASIC16.76■□□□□ 0.27
RNF138Q8WVD3 FAM53A-205ENST00000472884 2086 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
RNF138Q8WVD3 TMPRSS12-201ENST00000398458 1450 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
RNF138Q8WVD3 HBEGF-201ENST00000230990 2386 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
RNF138Q8WVD3 COPE-201ENST00000262812 1141 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
RNF138Q8WVD3 RPA2-201ENST00000313433 1237 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
RNF138Q8WVD3 SMYD3-204ENST00000403792 1209 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
RNF138Q8WVD3 BX890604.1-205ENST00000425492 856 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
RNF138Q8WVD3 AL513320.1-201ENST00000435049 622 ntTSL 3 BASIC16.76■□□□□ 0.27
RNF138Q8WVD3 MYD88-206ENST00000443433 914 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
RNF138Q8WVD3 MYD88-211ENST00000495303 976 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
RNF138Q8WVD3 LINC02317-201ENST00000555413 426 ntTSL 3 BASIC16.76■□□□□ 0.27
RNF138Q8WVD3 ZNF444P1-201ENST00000559497 298 ntBASIC16.76■□□□□ 0.27
RNF138Q8WVD3 ATP6V0C-203ENST00000565223 668 ntTSL 3 BASIC16.76■□□□□ 0.27
RNF138Q8WVD3 ATP6V0C-204ENST00000568562 477 ntTSL 3 BASIC16.76■□□□□ 0.27
RNF138Q8WVD3 IFNL4-202ENST00000616270 1132 ntAPPRIS ALT2 TSL 1 (best) BASIC16.76■□□□□ 0.27
RNF138Q8WVD3 CD24-206ENST00000620405 586 ntAPPRIS ALT2 TSL 2 BASIC16.76■□□□□ 0.27
RNF138Q8WVD3 C1QTNF8-202ENST00000621771 897 ntTSL 5 BASIC16.76■□□□□ 0.27
RNF138Q8WVD3 WDR6-223ENST00000627177 207 ntTSL 2 BASIC16.76■□□□□ 0.27
RNF138Q8WVD3 USP39-201ENST00000323701 2177 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
RNF138Q8WVD3 ALDOC-201ENST00000226253 1982 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
RNF138Q8WVD3 LRRC27-203ENST00000368613 2113 ntAPPRIS P3 TSL 1 (best) BASIC16.76■□□□□ 0.27
RNF138Q8WVD3 MEN1-201ENST00000312049 2761 ntAPPRIS ALT1 TSL 1 (best) BASIC16.76■□□□□ 0.27
RNF138Q8WVD3 SERPINE2-206ENST00000447280 1716 ntTSL 2 BASIC16.76■□□□□ 0.27
RNF138Q8WVD3 CRELD2-201ENST00000328268 1357 ntAPPRIS P3 TSL 1 (best) BASIC16.76■□□□□ 0.27
RNF138Q8WVD3 KRT24-201ENST00000264651 1881 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
RNF138Q8WVD3 HOXC11-201ENST00000243082 2039 ntTSL 3 BASIC16.75■□□□□ 0.27
RNF138Q8WVD3 HCLS1-201ENST00000314583 2000 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
RNF138Q8WVD3 LDHD-202ENST00000450168 1966 ntAPPRIS ALT2 TSL 1 (best) BASIC16.75■□□□□ 0.27
RNF138Q8WVD3 TEAD2-202ENST00000377214 2440 ntAPPRIS ALT1 TSL 2 BASIC16.75■□□□□ 0.27
RNF138Q8WVD3 NUMBL-202ENST00000540131 1931 ntAPPRIS ALT2 TSL 2 BASIC16.75■□□□□ 0.27
RNF138Q8WVD3 SDF4-201ENST00000263741 2079 ntAPPRIS P3 TSL 1 (best) BASIC16.75■□□□□ 0.27
RNF138Q8WVD3 IGLL1-201ENST00000249053 716 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
RNF138Q8WVD3 PARK7-201ENST00000338639 949 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
RNF138Q8WVD3 CLN3-202ENST00000355477 1173 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
RNF138Q8WVD3 DDRGK1-202ENST00000380201 1128 ntTSL 2 BASIC16.75■□□□□ 0.27
RNF138Q8WVD3 TMEM243-203ENST00000433078 1273 ntAPPRIS P1 TSL 2 BASIC16.75■□□□□ 0.27
RNF138Q8WVD3 VENTXP5-201ENST00000523979 775 ntBASIC16.75■□□□□ 0.27
RNF138Q8WVD3 AC026471.3-201ENST00000565137 578 ntTSL 2 BASIC16.75■□□□□ 0.27
RNF138Q8WVD3 COLCA2-205ENST00000614153 1264 ntTSL 3 BASIC16.75■□□□□ 0.27
RNF138Q8WVD3 PCDHB2-202ENST00000622947 2231 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
RNF138Q8WVD3 CD209-210ENST00000601951 1439 ntAPPRIS ALT2 TSL 1 (best) BASIC16.75■□□□□ 0.27
RNF138Q8WVD3 ITPKB-202ENST00000366784 3146 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
RNF138Q8WVD3 WNT9B-201ENST00000290015 1376 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
RNF138Q8WVD3 EMD-202ENST00000369842 1379 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
RNF138Q8WVD3 ZNF667-AS1-201ENST00000585445 1521 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
RNF138Q8WVD3 AC087457.1-201ENST00000503496 2727 ntTSL 2 BASIC16.75■□□□□ 0.27
RNF138Q8WVD3 ARHGEF7-202ENST00000317133 4361 ntAPPRIS ALT2 TSL 1 (best) BASIC16.75■□□□□ 0.27
RNF138Q8WVD3 AC138356.1-201ENST00000330539 2086 ntTSL 2 BASIC16.74■□□□□ 0.27
RNF138Q8WVD3 NTMT1-211ENST00000617943 1346 ntTSL 3 BASIC16.74■□□□□ 0.27
RNF138Q8WVD3 MTDH-203ENST00000519934 2184 ntTSL 5 BASIC16.74■□□□□ 0.27
RNF138Q8WVD3 GNS-208ENST00000543646 2164 ntAPPRIS ALT2 TSL 2 BASIC16.74■□□□□ 0.27
RNF138Q8WVD3 IRAK3-202ENST00000457197 1853 ntTSL 2 BASIC16.74■□□□□ 0.27
RNF138Q8WVD3 AC087500.1-202ENST00000571689 1715 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
RNF138Q8WVD3 RABL2B-205ENST00000395595 2428 ntAPPRIS ALT2 TSL 1 (best) BASIC16.74■□□□□ 0.27
RNF138Q8WVD3 RNF38-204ENST00000357058 5254 ntAPPRIS P1 TSL 5 BASIC16.74■□□□□ 0.27
RNF138Q8WVD3 AC005082.1-201ENST00000413042 2259 ntBASIC16.74■□□□□ 0.27
RNF138Q8WVD3 FAM72C-202ENST00000584486 2297 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
RNF138Q8WVD3 ATP6V0C-201ENST00000330398 1175 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
RNF138Q8WVD3 SNCB-202ENST00000393693 1234 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
RNF138Q8WVD3 EEF1D-202ENST00000395119 1249 ntAPPRIS ALT2 TSL 1 (best) BASIC16.74■□□□□ 0.27
RNF138Q8WVD3 AC113404.2-201ENST00000507884 177 ntBASIC16.74■□□□□ 0.27
RNF138Q8WVD3 FAM86EP-206ENST00000510506 987 ntBASIC16.74■□□□□ 0.27
RNF138Q8WVD3 MOK-234ENST00000524370 1165 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
RNF138Q8WVD3 TEN1-204ENST00000588202 862 ntTSL 3 BASIC16.74■□□□□ 0.27
RNF138Q8WVD3 LITAF-220ENST00000620789 692 ntTSL 5 BASIC16.74■□□□□ 0.27
RNF138Q8WVD3 ACSM2A-201ENST00000219054 1988 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
RNF138Q8WVD3 AC138696.1-201ENST00000522452 2897 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
RNF138Q8WVD3 PRDM14-201ENST00000276594 2344 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
RNF138Q8WVD3 LIN28B-AS1-203ENST00000636682 1797 ntTSL 3 BASIC16.74■□□□□ 0.27
RNF138Q8WVD3 LINC01126-201ENST00000623515 1646 ntBASIC16.74■□□□□ 0.27
RNF138Q8WVD3 TMEM109-201ENST00000227525 2413 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
RNF138Q8WVD3 GTF3C5-202ENST00000372097 2406 ntAPPRIS P3 TSL 1 (best) BASIC16.74■□□□□ 0.27
RNF138Q8WVD3 DAPK2-205ENST00000558069 1473 ntTSL 5 BASIC16.73■□□□□ 0.27
RNF138Q8WVD3 MED25-212ENST00000618715 1467 ntTSL 5 BASIC16.73■□□□□ 0.27
RNF138Q8WVD3 DPP10-203ENST00000393147 2758 ntAPPRIS ALT2 TSL 1 (best) BASIC16.73■□□□□ 0.27
RNF138Q8WVD3 LAT-204ENST00000395461 1448 ntAPPRIS ALT2 TSL 1 (best) BASIC16.73■□□□□ 0.27
RNF138Q8WVD3 ELP5-204ENST00000396628 1423 ntAPPRIS P2 TSL 1 (best) BASIC16.73■□□□□ 0.27
RNF138Q8WVD3 TIMM8A-201ENST00000372902 1664 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
RNF138Q8WVD3 ETV4-201ENST00000319349 2429 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
RNF138Q8WVD3 TTTY14-203ENST00000447937 920 ntTSL 3 BASIC16.73■□□□□ 0.27
RNF138Q8WVD3 AL109797.1-201ENST00000452501 835 ntTSL 2 BASIC16.73■□□□□ 0.27
RNF138Q8WVD3 PAQR4-204ENST00000574988 869 ntTSL 2 BASIC16.73■□□□□ 0.27
RNF138Q8WVD3 RPARP-AS1-206ENST00000596366 631 ntTSL 3 BASIC16.73■□□□□ 0.27
RNF138Q8WVD3 GFOD2-207ENST00000602855 819 ntTSL 3 BASIC16.73■□□□□ 0.27
Retrieved 100 of 98,524 protein–RNA pairs in 39.1 ms